Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2380 ATGGTTCTCTCTCTCATCCTTCTCTCTCTCCTCCTTCTCCTCGTCGCCTACAACCTCTACAACCGCCTCCGGTTCAAGCTCCCTCCAGGGCCACGGCCGCTTCCGGTGGTCGGAAACCTGTACGACGTGAAACCGGTCCGGTTCAGATGTTACGCGGAGTGGGCCAAGCAGTACGGTCCGATCATATCGGTTTGGTTCGGGTCGACGCTGAACGTAGTGGTGTCGAACACGGAGCTGGCAAGGGAAGTTCTGAAGGAGCACGACCAGAGCCTGGCGGACCGGCACCGGAGCCGATCGGCGGCGAAATTCAGCCGGGACGGGAAGGACCTGATTTGGGCGGATTATGGACCCCATTATGTGAAGGTGAGGAAAGTTTGTACAATCGAACTGTTCTCTCCGAAACGACTCGAATCTCTGAGGCCGATTAGAGAAGATGAAGTTTCCGCCATGGTTGAAGATGTCTTCAACCACTGCACTAATTCTGAGAACTATGGAAAGAGCTTGAAGCTGAGGGAGTTTCTGGGAGCAGTTTCATTCAACAACATCACAAGGCTCGCATTTGGGAAGAGGTTTGTGAATTCCAATGGCGTTATGGATGAACAGGGCTTGGAATTCAAGGCCATTGTCGCCAATGGCCTCAAGCTCGGCGCCTCCCTGGCTATGGCCGAGCACATCCCTTGGCTCCGCTGGATGTTCCCTCTCGAAGAAGAAGCCTTCGCCAAGCACGGCGCCCGTCGCGACCGTCTCACCCGAGCCATCATGGAAGAGCACACCAAAGCTCGCAACCTGAGCGGCAATGTCAAGAACCACTTCGTTGATGCTCTCCTCACTCTCAAAGACAAGTACGATCTCAGTGAAGACACCATCATTGGCCTCCTTTGGGATATGATCACTGCCGGCATGGACACGACAGCGATTTCAGTGGAATGGGCGATGGCGGAGATCGTAAGAAACCCTAGAGTGCAAAAGAAGGTTCAGGAGGAACTAGACAATGCAATTGGGGTAGATCGGATCATGACAGAGAACGACTTCTCAAATCTTCCATATCTCCAATGCGTCGTAAAGGAGGCGATGAGATTACACCCACCGACGCCATTGATGCTGCCGCACCGATCCAACGCCAACGTGAAGATCGGCGGCTACGACATTCCCAAAGGATCGAACGTGCACGTGAACGTATGGGCGGTGGCACGTGACCCGGCAGTGTGGAAGAACCCGGAGGAATTCCGGCCGGAGCGGTTCTTTGAAGAGGATGTGGACATGAAAGGGCACGATCTGCGACTGCTGCCGTTCGGAGCAGGGCGGAGGGTTTGTCCAGGGGCTCAATTGGGGATTAATTTGGTGACATCAATGTTGGGGCACCTTCTGCACCACTTCGAGTGGACGCCGCCGCCGGGGATGAAGGCGGAGGAGATCGACATGACGGAGAGCCCTGGATTGGTGTCGTACATGAAGACGCCGGTGCAGGCTGTGGCCACTCCCAGGCTGCCTTCAGGACTGTACAAACGTGTGCCTGTGGACATGTAA 1527 55.21 MVLSLILLSLLLLLVAYNLYNRLRFKLPPGPRPLPVVGNLYDVKPVRFRCYAEWAKQYGPIISVWFGSTLNVVVSNTELAREVLKEHDQSLADRHRSRSAAKFSRDGKDLIWADYGPHYVKVRKVCTIELFSPKRLESLRPIREDEVSAMVEDVFNHCTNSENYGKSLKLREFLGAVSFNNITRLAFGKRFVNSNGVMDEQGLEFKAIVANGLKLGASLAMAEHIPWLRWMFPLEEEAFAKHGARRDRLTRAIMEEHTKARNLSGNVKNHFVDALLTLKDKYDLSEDTIIGLLWDMITAGMDTTAISVEWAMAEIVRNPRVQKKVQEELDNAIGVDRIMTENDFSNLPYLQCVVKEAMRLHPPTPLMLPHRSNANVKIGGYDIPKGSNVHVNVWAVARDPAVWKNPEEFRPERFFEEDVDMKGHDLRLLPFGAGRRVCPGAQLGINLVTSMLGHLLHHFEWTPPPGMKAEEIDMTESPGLVSYMKTPVQAVATPRLPSGLYKRVPVDM 508
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 30224754 30228425 - CmPI595203_10g023800.1 Cmu10g2380 427910
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2380 508 CDD CYP98 58 490 - -
Cmu10g2380 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu10g2380 508 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 FunFam Cytochrome P450 21 499 - -
Cmu10g2380 508 Pfam Cytochrome P450 28 481 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 SUPERFAMILY Cytochrome P450 28 495 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 Gene3D Cytochrome P450 21 498 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PANTHER CYTOCHROME P450 98A9 5 502 - -
Cmu10g2380 508 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PRINTS E-class P450 group I signature 79 100 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu10g2380 508 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2010 Cmu-Chr5:29829393 Cmu10g2380 Cmu-Chr10:30224754 1.10E-53 dispersed
Cmu10g2380 Cmu-Chr10:30224754 Cmu11g1549 Cmu-Chr11:27788483 6.10E-74 dispersed
Cmu11g1377 Cmu-Chr11:25920837 Cmu10g2380 Cmu-Chr10:30224754 6.90E-62 dispersed
Cmu10g2380 Cmu-Chr10:30224754 Cmu05g2641 Cmu-Chr5:35021372 1.60E-82 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2380 K09754 - csv:101217257 917.146