Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2382 ATGGGATTCTTAGAATGTCTTGGCCATTTCTTTCAAAATGCAAATCCTTACATCGCAGTCATCTCCCTCCAATTCGGCTATGCCGGAATGAATATCATCTCCACCGTCTCCCTCAACCGGGGTATGAGCCACTACGTCCTCGTTGTCTACCGCCATGCCTTTGCCACCGCCGTCATGGCACCCTTTGCTCTTGTTCTCGAGAGGAAAGTAAGACCCAAGATTACATTTAAGATTTTCATTCAGATGTTTGTTCTTGCTCTACTTGGGCCACTGATTGATCAAAACTTCTACTATGTGGGGCTGAAAATGACATCCCCAACTTTCTCTTGTGCCATAAGCAACATGCTTCCTTCAATGACATTTGTGATGGCAGTCATTTGCAGGATGGAGAAGTTGGATTTGAAAAGAGTGAGATGCCAAGCAAAGTTGTTTGGAACAGTAATGACGGTAGTGGGAGCCATGTTGATGACATTTTACAAAGGAAGTGTCATCAAATTCTTCTGGACCGGGCACGGCCACCAACCGCACGCACCACCTACTGCAGATGCGGCAGCACTCAACCACCACAACGACGGAGAGTTCATCAAAGGCTCAATCTTGCTCATCATCGCCACTCTGGCTTGGGCAGCCTTCTTCATTCTCCAAGTCATAACTTTGAGAAAATACACCGCTCATCTTTCTCTCACCACTTTGGTTTGCTTTTTGGGAACCCTTCAGGCCATTGTTGTCACCCTTGCTATGGAGCACCACCCCTCTGCTTGGGCTATCGGCTGGGACTTGAACCTTCTTGCCGCCGCATATGCAGGGATTGTGACTTCAGGGGTGGCATATTATGTTCAAGGTTTGGTTATGAAGACAAAGGGGCCAGTTTTTGTAACAGCTTTTAGCCCTTTGATGATGGTGATTGTTGCTTTCATGGGATCTCTCATCTTGGCTGAAAAGATTTATGTTGGAGGGATAATTGGAGCAGTGTTGATTGTGATAGGGCTGTACTCTGTTTTGTGGGGAAAGTACAAAGAAAGCAAAGAGAAAGAAGATGAAGAGATTGTTGAATTAGCAATGAAAGGTGGAGATCAATTGCCTGTAATAAATGAAGGCATTGAAACAATTCAAAAGAAAGAGGGTTTGGCCATTACTATTCCACCCCAAGCTCATGGAGAAGAGGCTTCAAGACACTAA 1179 45.38 MGFLECLGHFFQNANPYIAVISLQFGYAGMNIISTVSLNRGMSHYVLVVYRHAFATAVMAPFALVLERKVRPKITFKIFIQMFVLALLGPLIDQNFYYVGLKMTSPTFSCAISNMLPSMTFVMAVICRMEKLDLKRVRCQAKLFGTVMTVVGAMLMTFYKGSVIKFFWTGHGHQPHAPPTADAAALNHHNDGEFIKGSILLIIATLAWAAFFILQVITLRKYTAHLSLTTLVCFLGTLQAIVVTLAMEHHPSAWAIGWDLNLLAAAYAGIVTSGVAYYVQGLVMKTKGPVFVTAFSPLMMVIVAFMGSLILAEKIYVGGIIGAVLIVIGLYSVLWGKYKESKEKEDEEIVELAMKGGDQLPVINEGIETIQKKEGLAITIPPQAHGEEASRH 392
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30243126 30245344 - CmPI595203_10g023820.1 Cmu10g2382 427912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2382 392 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020(InterPro)
Cmu10g2382 392 Pfam EamA-like transporter family 20 157 IPR000620 GO:0016020(InterPro)
Cmu10g2382 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
Cmu10g2382 392 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 338 - -
Cmu10g2382 392 PANTHER WAT1-RELATED PROTEIN 18 346 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1471 Cmu-Chr2:28480547 Cmu10g2382 Cmu-Chr10:30243126 7.30E-69 dispersed
Cmu04g0632 Cmu-Chr4:20118561 Cmu10g2382 Cmu-Chr10:30243126 8.40E-125 dispersed
Cmu06g1064 Cmu-Chr6:19942021 Cmu10g2382 Cmu-Chr10:30243126 1.90E-59 dispersed
Cmu08g0509 Cmu-Chr8:16935199 Cmu10g2382 Cmu-Chr10:30243126 5.50E-93 dispersed
Cmu08g0646 Cmu-Chr8:18673879 Cmu10g2382 Cmu-Chr10:30243126 4.60E-60 dispersed
Cmu08g1406 Cmu-Chr8:26226469 Cmu10g2382 Cmu-Chr10:30243126 4.50E-63 dispersed
Cmu09g1925 Cmu-Chr9:35325957 Cmu10g2382 Cmu-Chr10:30243126 4.30E-66 dispersed
Cmu09g1926 Cmu-Chr9:35353298 Cmu10g2382 Cmu-Chr10:30243126 1.70E-84 dispersed
Cmu10g2382 Cmu-Chr10:30243126 Cmu11g1324 Cmu-Chr11:25447424 3.40E-125 dispersed
Cmu10g2381 Cmu-Chr10:30238111 Cmu10g2382 Cmu-Chr10:30243126 1.00E-26 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2382 - - - 0.0