Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu10g2385 | ATGGATATCTCTGTTCTATCTGTTCTAACACTAACACCCTTCATTTTCCTCACTTTTCTTTCTCTTTCCCTTTACCTTCTCTTCTTCACTTCACCAAACACCAAATCCAAACCCCACCAAGGTTTCAAACACTTCCCCCTCGTCGGAACCTTGCCGCTCTTCTTATTAAACCGCCACCGTTTTCTTGACTGGTCTACTGAGGTTCTCAAAAGCTGCCGGACGAACACGGCGGTGTTCAAGCGGCCAGGGAAAGTCCACGGCGTAATCACCGCGAACCCACTTGTGGTTGAGCATATACTGAAGACCCAATTTGAGAATTACCCAAAAGGGGAAAGATTCATTTCGCTTTTGGAAGATTTCTTGGGGCGAGGAATTTTCAATTCCGACGGCGAAATTTGGAAAGTGCAGAGGAAAACGGCGAGTTATGAATTCAATACGAAATCGTTAAGGAATTTTGTTATGGAGAATGTTAGAGTTGAGGTTCAGAGTAGGCTGTTGCCTATATTTGGAAAAGCTTGTGAAACGGAGCGGATTTTGGATCTACAGGACGTTTTGGAACGGTTTGCGTTTGATAATGTTTGTAAATTGGCTTTTAATTATGATCCTGCTTGTCTCGGCGGCGATGGCACCGCCGCCGCCGAGTTCATGCGCGCTTTTGAGGACGCCGCCACTCTCAGCTCCGGCAGATTCATGTATGCTTTCCCAGGTTTGTACAAAGTGAAGAAATTTTTAAACATAGGATCAGAAAGAAGCCTGAAGGAAGCAATAGCCATAGTTCACAAATTTGCAGATGACATCATCTCCTCAAGAATGGAAGAGAAGAAGAGAACCCAAATAGAAAAAGATCAAGATTTATTATCTCGATTCATGGGAGACGAAAACAATTCTCCAGAATTCCTTCGAGACATAATCATAAGTTTCATCCTTGCGGGGCGAGACACTACTTCTTCAGCTCTAACATGGTTTTTCTGGATTTTATCGTCACGACCCGATGTTGAACAAAAAATCCTAACAGAACTCCAAACAATCCGATCAAGAACACATAAGGAAATCGGAGAAATGTATGGCTTCGACCAACTTCGAGATATGCAGTATCTACAAGCAGCATTATCCGAGACACTCCGCCTATATCCACCGGTGCCAGTGGATACAAAAGCTTGTCGAAACGATGACGTCTTACCCGATGGGACGTTTATCGGGAAGAGTTGGTTCGTGACGTACCATACATATGCAATGGGGAGAATGGAGAGCATATGGGGGAAGAATTATGGAGAATTTTCACCGGAAAGGTGGCTACAGAATGGGGTTTGTAAGACGGAGAGTCCGTTTCGTTTCCCGATATTTCACGCGGGACCGAGGATGTGTTTAGGAAAGGACATGGCTTATATTCAGATGAAGTCCATAGCTGCAGCTGTGATTGAGAAGTTTGAAGTGGAAATGGTGGAGAAGAAGAAAACTCCAAAGCATTTGTTGTCTTTAACATTGAGGATGGAGAATGGGTTACAAGTGATGGTCAAAAAGAGAGATAGGAGTATGCCCATTTGA | 1545 | 43.95 | MDISVLSVLTLTPFIFLTFLSLSLYLLFFTSPNTKSKPHQGFKHFPLVGTLPLFLLNRHRFLDWSTEVLKSCRTNTAVFKRPGKVHGVITANPLVVEHILKTQFENYPKGERFISLLEDFLGRGIFNSDGEIWKVQRKTASYEFNTKSLRNFVMENVRVEVQSRLLPIFGKACETERILDLQDVLERFAFDNVCKLAFNYDPACLGGDGTAAAEFMRAFEDAATLSSGRFMYAFPGLYKVKKFLNIGSERSLKEAIAIVHKFADDIISSRMEEKKRTQIEKDQDLLSRFMGDENNSPEFLRDIIISFILAGRDTTSSALTWFFWILSSRPDVEQKILTELQTIRSRTHKEIGEMYGFDQLRDMQYLQAALSETLRLYPPVPVDTKACRNDDVLPDGTFIGKSWFVTYHTYAMGRMESIWGKNYGEFSPERWLQNGVCKTESPFRFPIFHAGPRMCLGKDMAYIQMKSIAAAVIEKFEVEMVEKKKTPKHLLSLTLRMENGLQVMVKKRDRSMPI | 514 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 30269058 | 30270991 | + | CmPI595203_10g023850.1 | Cmu10g2385 | 427915 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu10g2385 | 514 | Gene3D | Cytochrome P450 | 29 | 512 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | PRINTS | P450 superfamily signature | 368 | 379 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | PANTHER | CYTOCHROME P450 | 24 | 501 | - | - | |
| Cmu10g2385 | 514 | Pfam | Cytochrome P450 | 81 | 491 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | PRINTS | E-class P450 group I signature | 367 | 385 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu10g2385 | 514 | CDD | CYP86A | 76 | 501 | - | - | |
| Cmu10g2385 | 514 | FunFam | Cytochrome P450 | 33 | 511 | - | - | |
| Cmu10g2385 | 514 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cmu10g2385 | 514 | SUPERFAMILY | Cytochrome P450 | 38 | 508 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu05g0225 | Cmu-Chr5:1876953 | Cmu10g2385 | Cmu-Chr10:30269058 | 5.40E-91 | dispersed | |
| Cmu06g1825 | Cmu-Chr6:29180453 | Cmu10g2385 | Cmu-Chr10:30269058 | 3.30E-112 | dispersed | |
| Cmu07g0133 | Cmu-Chr7:1218816 | Cmu10g2385 | Cmu-Chr10:30269058 | 7.90E-122 | dispersed | |
| Cmu09g0434 | Cmu-Chr9:4086440 | Cmu10g2385 | Cmu-Chr10:30269058 | 9.00E-103 | dispersed | |
| Cmu10g1973 | Cmu-Chr10:25397087 | Cmu10g2385 | Cmu-Chr10:30269058 | 7.90E-104 | dispersed | |
| Cmu10g2385 | Cmu-Chr10:30269058 | Cmu10g2637 | Cmu-Chr10:33127361 | 3.80E-108 | dispersed | |
| Cmu10g2383 | Cmu-Chr10:30263698 | Cmu10g2385 | Cmu-Chr10:30269058 | 8.10E-66 | proximal | |
| Cmu10g2384 | Cmu-Chr10:30264334 | Cmu10g2385 | Cmu-Chr10:30269058 | 2.40E-131 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu10g2385 | - | - | - | 0.0 |