Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2400 ATGTCTTCTGGGGCTCGATTGCTTGTCTTGGATTTTGCCCTCTCTTTTATGTGGTTATGGTCGGGGGTTCTCGTTAAGATCTTTGTTTTTGGGATATTGGGGTTCGGAAATGATCTGATTACTGAGTTTGTCAAGACTGTCGTTTCGATTCTCAACATGTTTTTTTTTGCGTTCTTGGTGAAAATTTCAAAAGGGGCTGCTTATAATCCTCTTAGCATCTTGTCTGCTGCTTTTTCTGGGGATTTCAGCAGCTTTCTCTTCACAGTTGGTGCCAGAATCCCTGCTCAGGTAATGGGAGCTATTACTGCTGTTAGGCTGATTATCCATACATTTCCCGAAGCAGGACGAGGGCCCCGTTTAAACGTTGGCATCCATCATGGAGCTTTGACAGAAGGATTATTAACGTTCGCCATTGTATTTATCTCACTTGGACTTTCAAGGAAAATCGATGGAAATTTCTTCATGAAGACTTGGATCTCAAGTTTATCCAAGTTAACTCTTCATATTCTCGGTTCCGACTTAACTGGTGGCTGTATGAACCCTGCATCTGTAATGGGATGGGCGTATGCTCGTGGGGAACATATAACGATCGAACATATTCTTGTATACTGGATCGCTCCAATTCAAGGAACTATAGTAGCAGTATTGACGTTTAAGTTACTATTTCGACAATCGAAAGAGGAGAAAGTAAATATGAAGAAGAAATCAGAATAG 714 41.32 MSSGARLLVLDFALSFMWLWSGVLVKIFVFGILGFGNDLITEFVKTVVSILNMFFFAFLVKISKGAAYNPLSILSAAFSGDFSSFLFTVGARIPAQVMGAITAVRLIIHTFPEAGRGPRLNVGIHHGALTEGLLTFAIVFISLGLSRKIDGNFFMKTWISSLSKLTLHILGSDLTGGCMNPASVMGWAYARGEHITIEHILVYWIAPIQGTIVAVLTFKLLFRQSKEEKVNMKKKSE 237
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 30465604 30469320 - CmPI595203_10g024000.1 Cmu10g2400 427930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2400 237 Gene3D Glycerol uptake facilitator protein. 3 236 IPR023271 -
Cmu10g2400 237 PRINTS Major intrinsic protein family signature 201 221 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu10g2400 237 PRINTS Major intrinsic protein family signature 88 107 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu10g2400 237 PRINTS Major intrinsic protein family signature 161 183 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu10g2400 237 PRINTS Major intrinsic protein family signature 6 25 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu10g2400 237 PRINTS Major intrinsic protein family signature 130 148 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu10g2400 237 SUPERFAMILY Aquaporin-like 6 235 IPR023271 -
Cmu10g2400 237 Pfam Major intrinsic protein 50 217 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cmu10g2400 237 PANTHER AQUAPORIN SIP2-1-RELATED 3 237 IPR044226 GO:0015267(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2400 K09875 - csv:101214379 427.943