Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g2475 | ATGCTCCAACAGCGTCTGCTTACGTATTTTAGTGTCGTTGTCTATTCGACGATTCTGACTTCGCGGGTTTGGGCATTCACTAATCCGCCGGATGTTATAGCTCTTCAGGGTCTGTATAGTGCTATGAACTACCCACTAGAGCTTAAAGGATGGAGAAAAGAAGGTGGAGATCCCTGTGAGGAATCATGGACTGGAGTGTCTTGCTCCGGTTCTTCTGTAATATACCTTAAACTCCATGGACTAAATCTCACTGGGAATCTTGGAGGGCAGCTCAGCAACCTCATCGATTTGAAGCAACTGGATGTTAGCTCTAATAAACTTACGGGTGAAATTCCGCACAACTTGCCTCCTAATGCGACTCACATAAATATGGCATTCAACCATTTCAGCCAAAATCTTCCACATACTTTATCGTACATGGGACGTCTCCGACATCTAAATCTGAGCCATAATACTCTATCTGGTGTGATTGGGAATGTGTTCACTGGTTTACAGAATTTGAGAGAGATGGATTTATCATATAATGACTTCGCTGGAGATTTGCCAAGTTCATTTGGTTCCCTGACAAACATCACTAGACTGTTCTTGCAGAATAACAAATTCACTGGATCAGTTGCCTACTTGTCTCGCCTTCCATTAATTGACTTAAACATCCAAGACAATTATTTTAGTGGCATTATTCCAAAAAATTTTAGAAATATTCCAAATTTGTGGATTGGGGGCAATAGGTTTCGTCCAGAAGTCAATTCTCCACCCTGGGACTTTCCCCTGGAAAAAGCACCTATGGTGCAGAACATCAGTGGCCCTCCAACAACCAAGTCAAACGCTATCCAGAATTATCCCTCTCGGGGTATAGTCAGGCACGAGAAGAAAAGGCTTGGTCCGGGTGGAATTGTTCTCCTGGTTGGAGGGTTAACACTAGTAGTTAGCTTTGCAGCTATCTTTTTCGTATTTTCCATGAAGAAAGTGCATGACAAGAAAATAAATTTGAAGATTGGCAATATGTTACCTCGTTCTCTTCCTCTGGGCAAAGCTGAAGATGGTTCGTCTACTGCAACAGAAGAGAGCTCACAAAGCTTTCCCCTGAGTTCATTACTCATGGGTGGTCCAAGGCCTATACCTTTATTAAATCACACGAGAACTGAGAAAGTTTCTGGAAGAAAAGGTTTTTCGAAGAGATGCAGGCTCCCAGTGAGAACAAAAATTTACACTCTGACAGAGCTTCAATCCACTACAAACAAGTTTAGTCAAGAGAATCTTTTGGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCGGTGAAAAATATCAACATGGGAGAGCTCTCGTTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGAGGCACCCAAACATTGTTACACTGCTTGGATATTGTGTAGAGCATGGACAACATATACTCGGATATGAATATGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCATACATGCCTCTGTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAGTTGCCAGGGCTTTAGATTATCTGCATACAAGTTTTTTCCCTCCATTTGCTCACTGCAATCTGAAGGCTGCCAACATCTTACTGGATGAAGAACTGACGCCTCGTATTTGTGATTGTGGGCTGTCGGTTTTGAGGCCACTTGTGGCCAATAGAGTTAAAACGAAGGCTTCTGAGATTGTCAGTGGTGATAGAGGCTACCTTGCACCTGAACATGGCCAGCCAGGATTTGATAATACCAGAAGTGACGTGTATTCTTTTGGAGTGTTGCTTTTGGAGCTTGTCACAGGGAGAAAACCATTTGACAATTCGAAACCGAGGAAGGAGCAATTGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAGGCATCAAAGGAACATTTTCCTCCAAGGCTCTCTCACGCTTTGTCGATATTATCTCCCTTTGTATACAGTCTGTGAAAGAATTTCGACCGCCAATGTCTGAAATACTGGAACATCTAACAAATCTTCAAAGAAAGATGGAAATGGTGAAATGTGCTACAGCAGATGGAACTGAAGTGGATCCTTTTGAGAAATCCTTTCGTTCTACCAATACTGGCTTTCTCCGTGCGTTACTGTATTCCAGTGTCCTTGTCTTCTTGGTAATTCTGACTTCAGTCGTTCAGTGCTTTACCGACCCGTTCGATGTTATAGCTCTTCTCAATCTGTATAGTACCCTAAATTACCCACCTGAGCTTAAAGGATGGAGAACAGATGGTGGGGATCCTTGCGATGGAACGTGGACTGGGGTGTTTTGTGTTGGTTCTTCTGTAATAAACCTTAAACTTAATAGACTAAACCTTTCTGGGAATCTTGGAGACCAGCTTTATCTTCTCCATAATTTGAAGCAACTGGATGCTAGTTCCAATTCAATTCTGGGTGAATTTCCTTCTGGCTTACCCCCAAATGTCACTTCTGTGAATCTAAGCCATAATGTCCTATCTGGCCCCATCGGGAATGCTTTTTCTGGCTTACAAAATCTTGTGGAGATGGATCTGTCATATAACGATTTCACTGGAGATTTACCAAGTTCATTTGCTTCCTTGACTAATATCAATAGACTGTTCTTGCAGAAAAACAAATTCACAGGATCGGTTTCCTACTTATCTGACCTTCCATTGACTGATTTGAACATCCAAGACAATTACTTTAGTGGCACTATTCCAGAGCATTTCAAGACAATTCCAAATTTATGGATTGGGGGAAATAGGTTCGATGTAAGTAATTCTCCACCCTGGGATTTTTCTGTGGAAACAACACCTTTGACGCGAAACAATAGTAGCTTTCCATTAACAGAACCGATTATCATTGAGAAATGTCCCTACAAGAAAAAGGGGGGGAAAGGAGGGGAAAGATTGGGCCCTGCTGGAATAGCTATAGTGGCTGGTGGAGGTGGTTTTGTAATAATCTTTGCAGCTCTCTTTATTGCAATCTGCAACACACAAATATGTGCAAAGCAAAGGAGCATGAAGCACGTCAACGTGTCTCTTCCAGTCAGCAAAGCTGAAGACGGTTATTCCACCGCACCAGTTGGCAGCCCCCATATCTTGCCTCTCAGTTCTCCAGACATAGGTGGCAGTCTGAATCATGCATGTCCTACTCGTCATGCTAGAACTGAGAGGGGATGTAGCAGAAGTTTCTCTAAGAGATCCTGGTTCCCAGAAAAAACAAAAACTTACACTGTCACAGAGCTCGAATCCGCTACTAACAAGTACAGTGAAGAAAACCTTCTTGGAGAGGGATCTCTTGGTTCTGTCTATAAAGCTGAATTTCCTGATGGCCAAATTTTGGCTGTGAAGAGGGTTGATATGGCGGCACTCTCTTTCACACAAGAACAACAGTTTCTGGATGTGGTCTGCACTGTTTCCCGTTTGAGGCACCCTAACATTGTTAGCCTTCTTGGATACAGTGTAGAGAATGGACAACATTTACTAGCCTATGAGTACGTCAGGAATCTGTCTCTTGACGATGCTCTACACAGTGTAGCACACAAACCTCTATCGTCGAGTGTTCGAATCCAAATTGCTCATGGAGTTGCCAAGGCTTTGGATTACTTGCATAATGCCTTTTTCCCCCCATTTGCTCACTGCAATTTGAAGGCCGCCAACATCATGCTTGATGAAGAATTCATGCCAAAGATTTGTGACTGTGGTTTGTCTGTTTTGAAGCCTCTTGTTAGCAATAGAGTTAAAATCAAGGCTGCTCAAATTGCTTTTGCTGACACTGGCTACTTTGCACCTGAATATGGCCAATCTGGGATTGATCATACCAAAAGTGATGTGTATGCATTCGGAGTGTTGTTTCTGGAGCTTTTTACCGCAAAGAAACCAAACGATTTGAGACCAGGGATCGAGCAATCTCTGTCAAGATGGGCGTCATTTCAGCTTCACGACTGTGGGAGTCTAGATGAGATTATTGATCCTGAGATTAAAGGAACATTATCCTCCAAGGTTCTCTCTCGCTGTGCTGATATTATCACCCTTTGCATACAGCCTGTAATGGAACGTCGGCCACCCATGTTTGCCATTGTTGGATACCTGGCAAGTATTCAAAGAAGGTTCGAGATGGAAAAACGTGCTGCAGTGGAAGGTAAAGTAGTTGACACTTTCGAGAAATCCTTCCACACAACTAACACAGGGATTGTAAGACATCCTAACAAGACTGTCATTGGCATCAATGCTATCAATCGTCGCTTCTGGGTTCGTGCTATGATGGAGGACGCATCAAAGAACGGCGTCCTGGCCGTCCAAACGCTAAGGAACAACATAATGGCGTCTACTCTTCTGGCATCGACGGCGATAATGCTCTGTTCTCTAATCGCCGTCTTAATGACAAGCGGCGGCCACAGCGAATCTCCATTAGTCGTACTCGGCGACAGAAGCCAGTTCAGTTTCTCCATCAAATTTTTCGCCATTTTGCTTTGCTTTCTCGTAGCATTTTTGTTCAATGTTCAATCCATTAGGTATTATAGCCATGCCAGCATTCTGATCAACACGCCTTTCAAGAAAATTGCAATCGACGATCATAACCAACGGCTCACGGCGGAATACGTGGCGGCGACGGTGAACAGAGGCAGCTATTTCTGGTCGTTGGGATTGCGAGCTTTCTACTTCTCGTTTCCTCTGTTTTTGTGGATTTTCGGACCTATTCCTATGTTTTCTTCTTCATTTCTGCTTGTTTTTATGCTTTATTTCCTTGATGCTACTTTTGAATTCTGCTGGACGGATGGGAATTTGGATTACCTTCCTCAAAGAGACGAAGAAGAGGAAATTGGGAAATAG | 4893 | 43.35 | MLQQRLLTYFSVVVYSTILTSRVWAFTNPPDVIALQGLYSAMNYPLELKGWRKEGGDPCEESWTGVSCSGSSVIYLKLHGLNLTGNLGGQLSNLIDLKQLDVSSNKLTGEIPHNLPPNATHINMAFNHFSQNLPHTLSYMGRLRHLNLSHNTLSGVIGNVFTGLQNLREMDLSYNDFAGDLPSSFGSLTNITRLFLQNNKFTGSVAYLSRLPLIDLNIQDNYFSGIIPKNFRNIPNLWIGGNRFRPEVNSPPWDFPLEKAPMVQNISGPPTTKSNAIQNYPSRGIVRHEKKRLGPGGIVLLVGGLTLVVSFAAIFFVFSMKKVHDKKINLKIGNMLPRSLPLGKAEDGSSTATEESSQSFPLSSLLMGGPRPIPLLNHTRTEKVSGRKGFSKRCRLPVRTKIYTLTELQSTTNKFSQENLLGEGSLGAVYRAEFPDGQVLAVKNINMGELSFTEEEQFLDVVWTASRLRHPNIVTLLGYCVEHGQHILGYEYVRNLSLDDALHCEAYMPLSWTVRLQIALGVARALDYLHTSFFPPFAHCNLKAANILLDEELTPRICDCGLSVLRPLVANRVKTKASEIVSGDRGYLAPEHGQPGFDNTRSDVYSFGVLLLELVTGRKPFDNSKPRKEQLLVKWASSRLHDNESLEQMVDPGIKGTFSSKALSRFVDIISLCIQSVKEFRPPMSEILEHLTNLQRKMEMVKCATADGTEVDPFEKSFRSTNTGFLRALLYSSVLVFLVILTSVVQCFTDPFDVIALLNLYSTLNYPPELKGWRTDGGDPCDGTWTGVFCVGSSVINLKLNRLNLSGNLGDQLYLLHNLKQLDASSNSILGEFPSGLPPNVTSVNLSHNVLSGPIGNAFSGLQNLVEMDLSYNDFTGDLPSSFASLTNINRLFLQKNKFTGSVSYLSDLPLTDLNIQDNYFSGTIPEHFKTIPNLWIGGNRFDVSNSPPWDFSVETTPLTRNNSSFPLTEPIIIEKCPYKKKGGKGGERLGPAGIAIVAGGGGFVIIFAALFIAICNTQICAKQRSMKHVNVSLPVSKAEDGYSTAPVGSPHILPLSSPDIGGSLNHACPTRHARTERGCSRSFSKRSWFPEKTKTYTVTELESATNKYSEENLLGEGSLGSVYKAEFPDGQILAVKRVDMAALSFTQEQQFLDVVCTVSRLRHPNIVSLLGYSVENGQHLLAYEYVRNLSLDDALHSVAHKPLSSSVRIQIAHGVAKALDYLHNAFFPPFAHCNLKAANIMLDEEFMPKICDCGLSVLKPLVSNRVKIKAAQIAFADTGYFAPEYGQSGIDHTKSDVYAFGVLFLELFTAKKPNDLRPGIEQSLSRWASFQLHDCGSLDEIIDPEIKGTLSSKVLSRCADIITLCIQPVMERRPPMFAIVGYLASIQRRFEMEKRAAVEGKVVDTFEKSFHTTNTGIVRHPNKTVIGINAINRRFWVRAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGHSESPLVVLGDRSQFSFSIKFFAILLCFLVAFLFNVQSIRYYSHASILINTPFKKIAIDDHNQRLTAEYVAATVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFEFCWTDGNLDYLPQRDEEEEIGK | 1630 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 31363250 | 31377955 | - | CmPI595203_10g024750.1 | Cmu10g2475 | 428005 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g2475 | 1630 | Gene3D | Ribonuclease Inhibitor | 28 | 259 | IPR032675 | - | |
Cmu10g2475 | 1630 | Gene3D | Ribonuclease Inhibitor | 750 | 974 | IPR032675 | - | |
Cmu10g2475 | 1630 | MobiDBLite | consensus disorder prediction | 349 | 363 | - | - | |
Cmu10g2475 | 1630 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 380 | 492 | - | - | |
Cmu10g2475 | 1630 | SUPERFAMILY | Protein kinase-like (PK-like) | 1084 | 1383 | IPR011009 | - | |
Cmu10g2475 | 1630 | SUPERFAMILY | L domain-like | 27 | 238 | - | - | |
Cmu10g2475 | 1630 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 1074 | 1186 | - | - | |
Cmu10g2475 | 1630 | SUPERFAMILY | Protein kinase-like (PK-like) | 392 | 692 | IPR011009 | - | |
Cmu10g2475 | 1630 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 28 | 255 | - | - | |
Cmu10g2475 | 1630 | SMART | LRR_typ_2 | 140 | 163 | IPR003591 | - | |
Cmu10g2475 | 1630 | SMART | LRR_typ_2 | 164 | 187 | IPR003591 | - | |
Cmu10g2475 | 1630 | SMART | LRR_typ_2 | 94 | 118 | IPR003591 | - | |
Cmu10g2475 | 1630 | SMART | LRR_typ_2 | 862 | 885 | IPR003591 | - | |
Cmu10g2475 | 1630 | SMART | LRR_typ_2 | 188 | 211 | IPR003591 | - | |
Cmu10g2475 | 1630 | SMART | LRR_typ_2 | 816 | 844 | IPR003591 | - | |
Cmu10g2475 | 1630 | FunFam | Leucine-rich repeat receptor-like protein kinase | 1187 | 1395 | - | - | |
Cmu10g2475 | 1630 | Pfam | Leucine rich repeat N-terminal domain | 753 | 790 | IPR013210 | - | |
Cmu10g2475 | 1630 | Pfam | Leucine rich repeat N-terminal domain | 29 | 69 | IPR013210 | - | |
Cmu10g2475 | 1630 | Gene3D | Transferase(Phosphotransferase) domain 1 | 493 | 712 | - | - | |
Cmu10g2475 | 1630 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1187 | 1409 | - | - | |
Cmu10g2475 | 1630 | Pfam | Protein of unknown function, DUF599 | 1417 | 1607 | IPR006747 | - | |
Cmu10g2475 | 1630 | Pfam | Leucine Rich Repeat | 97 | 115 | IPR001611 | GO:0005515(InterPro) | |
Cmu10g2475 | 1630 | SUPERFAMILY | L domain-like | 747 | 936 | - | - | |
Cmu10g2475 | 1630 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 841 | 952 | - | - | |
Cmu10g2475 | 1630 | ProSiteProfiles | Protein kinase domain profile. | 1109 | 1391 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu10g2475 | 1630 | Gene3D | Phosphorylase Kinase; domain 1 | 378 | 492 | - | - | |
Cmu10g2475 | 1630 | Gene3D | Phosphorylase Kinase; domain 1 | 1071 | 1186 | - | - | |
Cmu10g2475 | 1630 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 | 30 | 695 | IPR046959 | - | |
Cmu10g2475 | 1630 | FunFam | Leucine-rich repeat receptor-like protein kinase | 493 | 702 | - | - | |
Cmu10g2475 | 1630 | Pfam | Protein kinase domain | 416 | 690 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu10g2475 | 1630 | Pfam | Protein kinase domain | 1109 | 1378 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu10g2475 | 1630 | ProSiteProfiles | Protein kinase domain profile. | 415 | 693 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu10g2475 | 1630 | MobiDBLite | consensus disorder prediction | 341 | 363 | - | - | |
Cmu10g2475 | 1630 | Pfam | Leucine rich repeat | 839 | 899 | IPR001611 | GO:0005515(InterPro) | |
Cmu10g2475 | 1630 | Pfam | Leucine rich repeat | 118 | 177 | IPR001611 | GO:0005515(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu04g1120 | Cmu-Chr4:25798566 | Cmu10g2475 | Cmu-Chr10:31363250 | 1.70E-44 | dispersed | |
Cmu06g1510 | Cmu-Chr6:26375084 | Cmu10g2475 | Cmu-Chr10:31363250 | 1.10E-32 | dispersed | |
Cmu09g0141 | Cmu-Chr9:1595205 | Cmu10g2475 | Cmu-Chr10:31363250 | 5.30E-92 | dispersed | |
Cmu10g2475 | Cmu-Chr10:31363250 | Cmu03g1136 | Cmu-Chr3:5790182 | 1.60E-62 | dispersed | |
Cmu10g2475 | Cmu-Chr10:31363250 | Cmu07g1401 | Cmu-Chr7:29264052 | 3.10E-103 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75863 | PF00069 | Pkinase | 1.50E-34 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g2475 | - | - | - | 0.0 |