Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2475 ATGCTCCAACAGCGTCTGCTTACGTATTTTAGTGTCGTTGTCTATTCGACGATTCTGACTTCGCGGGTTTGGGCATTCACTAATCCGCCGGATGTTATAGCTCTTCAGGGTCTGTATAGTGCTATGAACTACCCACTAGAGCTTAAAGGATGGAGAAAAGAAGGTGGAGATCCCTGTGAGGAATCATGGACTGGAGTGTCTTGCTCCGGTTCTTCTGTAATATACCTTAAACTCCATGGACTAAATCTCACTGGGAATCTTGGAGGGCAGCTCAGCAACCTCATCGATTTGAAGCAACTGGATGTTAGCTCTAATAAACTTACGGGTGAAATTCCGCACAACTTGCCTCCTAATGCGACTCACATAAATATGGCATTCAACCATTTCAGCCAAAATCTTCCACATACTTTATCGTACATGGGACGTCTCCGACATCTAAATCTGAGCCATAATACTCTATCTGGTGTGATTGGGAATGTGTTCACTGGTTTACAGAATTTGAGAGAGATGGATTTATCATATAATGACTTCGCTGGAGATTTGCCAAGTTCATTTGGTTCCCTGACAAACATCACTAGACTGTTCTTGCAGAATAACAAATTCACTGGATCAGTTGCCTACTTGTCTCGCCTTCCATTAATTGACTTAAACATCCAAGACAATTATTTTAGTGGCATTATTCCAAAAAATTTTAGAAATATTCCAAATTTGTGGATTGGGGGCAATAGGTTTCGTCCAGAAGTCAATTCTCCACCCTGGGACTTTCCCCTGGAAAAAGCACCTATGGTGCAGAACATCAGTGGCCCTCCAACAACCAAGTCAAACGCTATCCAGAATTATCCCTCTCGGGGTATAGTCAGGCACGAGAAGAAAAGGCTTGGTCCGGGTGGAATTGTTCTCCTGGTTGGAGGGTTAACACTAGTAGTTAGCTTTGCAGCTATCTTTTTCGTATTTTCCATGAAGAAAGTGCATGACAAGAAAATAAATTTGAAGATTGGCAATATGTTACCTCGTTCTCTTCCTCTGGGCAAAGCTGAAGATGGTTCGTCTACTGCAACAGAAGAGAGCTCACAAAGCTTTCCCCTGAGTTCATTACTCATGGGTGGTCCAAGGCCTATACCTTTATTAAATCACACGAGAACTGAGAAAGTTTCTGGAAGAAAAGGTTTTTCGAAGAGATGCAGGCTCCCAGTGAGAACAAAAATTTACACTCTGACAGAGCTTCAATCCACTACAAACAAGTTTAGTCAAGAGAATCTTTTGGGAGAGGGATCTCTTGGTGCTGTTTATAGAGCTGAATTTCCTGATGGCCAAGTTTTGGCGGTGAAAAATATCAACATGGGAGAGCTCTCGTTTACAGAAGAAGAGCAATTTCTGGATGTGGTATGGACTGCTTCCCGTTTGAGGCACCCAAACATTGTTACACTGCTTGGATATTGTGTAGAGCATGGACAACATATACTCGGATATGAATATGTTCGAAATCTGTCTCTTGATGACGCTTTACACTGTGAAGCATACATGCCTCTGTCATGGACTGTCCGTCTCCAGATTGCTCTTGGAGTTGCCAGGGCTTTAGATTATCTGCATACAAGTTTTTTCCCTCCATTTGCTCACTGCAATCTGAAGGCTGCCAACATCTTACTGGATGAAGAACTGACGCCTCGTATTTGTGATTGTGGGCTGTCGGTTTTGAGGCCACTTGTGGCCAATAGAGTTAAAACGAAGGCTTCTGAGATTGTCAGTGGTGATAGAGGCTACCTTGCACCTGAACATGGCCAGCCAGGATTTGATAATACCAGAAGTGACGTGTATTCTTTTGGAGTGTTGCTTTTGGAGCTTGTCACAGGGAGAAAACCATTTGACAATTCGAAACCGAGGAAGGAGCAATTGCTGGTGAAATGGGCTTCATCTCGGCTTCATGACAACGAGAGTTTAGAACAGATGGTTGATCCAGGCATCAAAGGAACATTTTCCTCCAAGGCTCTCTCACGCTTTGTCGATATTATCTCCCTTTGTATACAGTCTGTGAAAGAATTTCGACCGCCAATGTCTGAAATACTGGAACATCTAACAAATCTTCAAAGAAAGATGGAAATGGTGAAATGTGCTACAGCAGATGGAACTGAAGTGGATCCTTTTGAGAAATCCTTTCGTTCTACCAATACTGGCTTTCTCCGTGCGTTACTGTATTCCAGTGTCCTTGTCTTCTTGGTAATTCTGACTTCAGTCGTTCAGTGCTTTACCGACCCGTTCGATGTTATAGCTCTTCTCAATCTGTATAGTACCCTAAATTACCCACCTGAGCTTAAAGGATGGAGAACAGATGGTGGGGATCCTTGCGATGGAACGTGGACTGGGGTGTTTTGTGTTGGTTCTTCTGTAATAAACCTTAAACTTAATAGACTAAACCTTTCTGGGAATCTTGGAGACCAGCTTTATCTTCTCCATAATTTGAAGCAACTGGATGCTAGTTCCAATTCAATTCTGGGTGAATTTCCTTCTGGCTTACCCCCAAATGTCACTTCTGTGAATCTAAGCCATAATGTCCTATCTGGCCCCATCGGGAATGCTTTTTCTGGCTTACAAAATCTTGTGGAGATGGATCTGTCATATAACGATTTCACTGGAGATTTACCAAGTTCATTTGCTTCCTTGACTAATATCAATAGACTGTTCTTGCAGAAAAACAAATTCACAGGATCGGTTTCCTACTTATCTGACCTTCCATTGACTGATTTGAACATCCAAGACAATTACTTTAGTGGCACTATTCCAGAGCATTTCAAGACAATTCCAAATTTATGGATTGGGGGAAATAGGTTCGATGTAAGTAATTCTCCACCCTGGGATTTTTCTGTGGAAACAACACCTTTGACGCGAAACAATAGTAGCTTTCCATTAACAGAACCGATTATCATTGAGAAATGTCCCTACAAGAAAAAGGGGGGGAAAGGAGGGGAAAGATTGGGCCCTGCTGGAATAGCTATAGTGGCTGGTGGAGGTGGTTTTGTAATAATCTTTGCAGCTCTCTTTATTGCAATCTGCAACACACAAATATGTGCAAAGCAAAGGAGCATGAAGCACGTCAACGTGTCTCTTCCAGTCAGCAAAGCTGAAGACGGTTATTCCACCGCACCAGTTGGCAGCCCCCATATCTTGCCTCTCAGTTCTCCAGACATAGGTGGCAGTCTGAATCATGCATGTCCTACTCGTCATGCTAGAACTGAGAGGGGATGTAGCAGAAGTTTCTCTAAGAGATCCTGGTTCCCAGAAAAAACAAAAACTTACACTGTCACAGAGCTCGAATCCGCTACTAACAAGTACAGTGAAGAAAACCTTCTTGGAGAGGGATCTCTTGGTTCTGTCTATAAAGCTGAATTTCCTGATGGCCAAATTTTGGCTGTGAAGAGGGTTGATATGGCGGCACTCTCTTTCACACAAGAACAACAGTTTCTGGATGTGGTCTGCACTGTTTCCCGTTTGAGGCACCCTAACATTGTTAGCCTTCTTGGATACAGTGTAGAGAATGGACAACATTTACTAGCCTATGAGTACGTCAGGAATCTGTCTCTTGACGATGCTCTACACAGTGTAGCACACAAACCTCTATCGTCGAGTGTTCGAATCCAAATTGCTCATGGAGTTGCCAAGGCTTTGGATTACTTGCATAATGCCTTTTTCCCCCCATTTGCTCACTGCAATTTGAAGGCCGCCAACATCATGCTTGATGAAGAATTCATGCCAAAGATTTGTGACTGTGGTTTGTCTGTTTTGAAGCCTCTTGTTAGCAATAGAGTTAAAATCAAGGCTGCTCAAATTGCTTTTGCTGACACTGGCTACTTTGCACCTGAATATGGCCAATCTGGGATTGATCATACCAAAAGTGATGTGTATGCATTCGGAGTGTTGTTTCTGGAGCTTTTTACCGCAAAGAAACCAAACGATTTGAGACCAGGGATCGAGCAATCTCTGTCAAGATGGGCGTCATTTCAGCTTCACGACTGTGGGAGTCTAGATGAGATTATTGATCCTGAGATTAAAGGAACATTATCCTCCAAGGTTCTCTCTCGCTGTGCTGATATTATCACCCTTTGCATACAGCCTGTAATGGAACGTCGGCCACCCATGTTTGCCATTGTTGGATACCTGGCAAGTATTCAAAGAAGGTTCGAGATGGAAAAACGTGCTGCAGTGGAAGGTAAAGTAGTTGACACTTTCGAGAAATCCTTCCACACAACTAACACAGGGATTGTAAGACATCCTAACAAGACTGTCATTGGCATCAATGCTATCAATCGTCGCTTCTGGGTTCGTGCTATGATGGAGGACGCATCAAAGAACGGCGTCCTGGCCGTCCAAACGCTAAGGAACAACATAATGGCGTCTACTCTTCTGGCATCGACGGCGATAATGCTCTGTTCTCTAATCGCCGTCTTAATGACAAGCGGCGGCCACAGCGAATCTCCATTAGTCGTACTCGGCGACAGAAGCCAGTTCAGTTTCTCCATCAAATTTTTCGCCATTTTGCTTTGCTTTCTCGTAGCATTTTTGTTCAATGTTCAATCCATTAGGTATTATAGCCATGCCAGCATTCTGATCAACACGCCTTTCAAGAAAATTGCAATCGACGATCATAACCAACGGCTCACGGCGGAATACGTGGCGGCGACGGTGAACAGAGGCAGCTATTTCTGGTCGTTGGGATTGCGAGCTTTCTACTTCTCGTTTCCTCTGTTTTTGTGGATTTTCGGACCTATTCCTATGTTTTCTTCTTCATTTCTGCTTGTTTTTATGCTTTATTTCCTTGATGCTACTTTTGAATTCTGCTGGACGGATGGGAATTTGGATTACCTTCCTCAAAGAGACGAAGAAGAGGAAATTGGGAAATAG 4893 43.35 MLQQRLLTYFSVVVYSTILTSRVWAFTNPPDVIALQGLYSAMNYPLELKGWRKEGGDPCEESWTGVSCSGSSVIYLKLHGLNLTGNLGGQLSNLIDLKQLDVSSNKLTGEIPHNLPPNATHINMAFNHFSQNLPHTLSYMGRLRHLNLSHNTLSGVIGNVFTGLQNLREMDLSYNDFAGDLPSSFGSLTNITRLFLQNNKFTGSVAYLSRLPLIDLNIQDNYFSGIIPKNFRNIPNLWIGGNRFRPEVNSPPWDFPLEKAPMVQNISGPPTTKSNAIQNYPSRGIVRHEKKRLGPGGIVLLVGGLTLVVSFAAIFFVFSMKKVHDKKINLKIGNMLPRSLPLGKAEDGSSTATEESSQSFPLSSLLMGGPRPIPLLNHTRTEKVSGRKGFSKRCRLPVRTKIYTLTELQSTTNKFSQENLLGEGSLGAVYRAEFPDGQVLAVKNINMGELSFTEEEQFLDVVWTASRLRHPNIVTLLGYCVEHGQHILGYEYVRNLSLDDALHCEAYMPLSWTVRLQIALGVARALDYLHTSFFPPFAHCNLKAANILLDEELTPRICDCGLSVLRPLVANRVKTKASEIVSGDRGYLAPEHGQPGFDNTRSDVYSFGVLLLELVTGRKPFDNSKPRKEQLLVKWASSRLHDNESLEQMVDPGIKGTFSSKALSRFVDIISLCIQSVKEFRPPMSEILEHLTNLQRKMEMVKCATADGTEVDPFEKSFRSTNTGFLRALLYSSVLVFLVILTSVVQCFTDPFDVIALLNLYSTLNYPPELKGWRTDGGDPCDGTWTGVFCVGSSVINLKLNRLNLSGNLGDQLYLLHNLKQLDASSNSILGEFPSGLPPNVTSVNLSHNVLSGPIGNAFSGLQNLVEMDLSYNDFTGDLPSSFASLTNINRLFLQKNKFTGSVSYLSDLPLTDLNIQDNYFSGTIPEHFKTIPNLWIGGNRFDVSNSPPWDFSVETTPLTRNNSSFPLTEPIIIEKCPYKKKGGKGGERLGPAGIAIVAGGGGFVIIFAALFIAICNTQICAKQRSMKHVNVSLPVSKAEDGYSTAPVGSPHILPLSSPDIGGSLNHACPTRHARTERGCSRSFSKRSWFPEKTKTYTVTELESATNKYSEENLLGEGSLGSVYKAEFPDGQILAVKRVDMAALSFTQEQQFLDVVCTVSRLRHPNIVSLLGYSVENGQHLLAYEYVRNLSLDDALHSVAHKPLSSSVRIQIAHGVAKALDYLHNAFFPPFAHCNLKAANIMLDEEFMPKICDCGLSVLKPLVSNRVKIKAAQIAFADTGYFAPEYGQSGIDHTKSDVYAFGVLFLELFTAKKPNDLRPGIEQSLSRWASFQLHDCGSLDEIIDPEIKGTLSSKVLSRCADIITLCIQPVMERRPPMFAIVGYLASIQRRFEMEKRAAVEGKVVDTFEKSFHTTNTGIVRHPNKTVIGINAINRRFWVRAMMEDASKNGVLAVQTLRNNIMASTLLASTAIMLCSLIAVLMTSGGHSESPLVVLGDRSQFSFSIKFFAILLCFLVAFLFNVQSIRYYSHASILINTPFKKIAIDDHNQRLTAEYVAATVNRGSYFWSLGLRAFYFSFPLFLWIFGPIPMFSSSFLLVFMLYFLDATFEFCWTDGNLDYLPQRDEEEEIGK 1630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 31363250 31377955 - CmPI595203_10g024750.1 Cmu10g2475 428005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2475 1630 Gene3D Ribonuclease Inhibitor 28 259 IPR032675 -
Cmu10g2475 1630 Gene3D Ribonuclease Inhibitor 750 974 IPR032675 -
Cmu10g2475 1630 MobiDBLite consensus disorder prediction 349 363 - -
Cmu10g2475 1630 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 380 492 - -
Cmu10g2475 1630 SUPERFAMILY Protein kinase-like (PK-like) 1084 1383 IPR011009 -
Cmu10g2475 1630 SUPERFAMILY L domain-like 27 238 - -
Cmu10g2475 1630 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 1074 1186 - -
Cmu10g2475 1630 SUPERFAMILY Protein kinase-like (PK-like) 392 692 IPR011009 -
Cmu10g2475 1630 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 28 255 - -
Cmu10g2475 1630 SMART LRR_typ_2 140 163 IPR003591 -
Cmu10g2475 1630 SMART LRR_typ_2 164 187 IPR003591 -
Cmu10g2475 1630 SMART LRR_typ_2 94 118 IPR003591 -
Cmu10g2475 1630 SMART LRR_typ_2 862 885 IPR003591 -
Cmu10g2475 1630 SMART LRR_typ_2 188 211 IPR003591 -
Cmu10g2475 1630 SMART LRR_typ_2 816 844 IPR003591 -
Cmu10g2475 1630 FunFam Leucine-rich repeat receptor-like protein kinase 1187 1395 - -
Cmu10g2475 1630 Pfam Leucine rich repeat N-terminal domain 753 790 IPR013210 -
Cmu10g2475 1630 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Cmu10g2475 1630 Gene3D Transferase(Phosphotransferase) domain 1 493 712 - -
Cmu10g2475 1630 Gene3D Transferase(Phosphotransferase) domain 1 1187 1409 - -
Cmu10g2475 1630 Pfam Protein of unknown function, DUF599 1417 1607 IPR006747 -
Cmu10g2475 1630 Pfam Leucine Rich Repeat 97 115 IPR001611 GO:0005515(InterPro)
Cmu10g2475 1630 SUPERFAMILY L domain-like 747 936 - -
Cmu10g2475 1630 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 841 952 - -
Cmu10g2475 1630 ProSiteProfiles Protein kinase domain profile. 1109 1391 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2475 1630 Gene3D Phosphorylase Kinase; domain 1 378 492 - -
Cmu10g2475 1630 Gene3D Phosphorylase Kinase; domain 1 1071 1186 - -
Cmu10g2475 1630 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 30 695 IPR046959 -
Cmu10g2475 1630 FunFam Leucine-rich repeat receptor-like protein kinase 493 702 - -
Cmu10g2475 1630 Pfam Protein kinase domain 416 690 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2475 1630 Pfam Protein kinase domain 1109 1378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2475 1630 ProSiteProfiles Protein kinase domain profile. 415 693 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2475 1630 MobiDBLite consensus disorder prediction 341 363 - -
Cmu10g2475 1630 Pfam Leucine rich repeat 839 899 IPR001611 GO:0005515(InterPro)
Cmu10g2475 1630 Pfam Leucine rich repeat 118 177 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g1120 Cmu-Chr4:25798566 Cmu10g2475 Cmu-Chr10:31363250 1.70E-44 dispersed
Cmu06g1510 Cmu-Chr6:26375084 Cmu10g2475 Cmu-Chr10:31363250 1.10E-32 dispersed
Cmu09g0141 Cmu-Chr9:1595205 Cmu10g2475 Cmu-Chr10:31363250 5.30E-92 dispersed
Cmu10g2475 Cmu-Chr10:31363250 Cmu03g1136 Cmu-Chr3:5790182 1.60E-62 dispersed
Cmu10g2475 Cmu-Chr10:31363250 Cmu07g1401 Cmu-Chr7:29264052 3.10E-103 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75863 PF00069 Pkinase 1.50E-34 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2475 - - - 0.0