Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g2647 | ATGGACTTTGATCTGAAGCAATGTAGAACACAGAGGGAGTCAGAGGAGCAACAACATTCTGCAAAGATTTCTAAGTTGTTTGTTGAACAGACCCATCATCTTTCTTCTTCTTCCACTTCTGTTCTTCCTTTGTTTGTACCTGCTGATTCCAACAACAACTCCAAAACTTCCAACATCTTGTCAGCATTTCAAGATTCAACTTCTTCTACATTGCCCAGGATGCTGGGTTATTTCAGTGTGGCTCAAAGGCAAGAACTTGAACTTCAAGCTCTCATTTTCCGGTATATGTTGGCCGGCGCCGCCGTCCCGCCGGAGCTTCTCCACCCTATTAAGAAAAGCCTTATCTCTTCCTCTTCTTCTACTCCTTTCTTTCTTCATCATCCTCTTCAACATTTCCCTCACTATCCCACTTCTTTGTTGCAAGCAGGGCATTGGGGCAGAGCCGCCATGGATCCGGAGCCTGGCCGGTGCCGGAGAACCGACGGCAAAAAATGGCGTTGCTCAAGAGATGTCGTCGCCGGCCAGAAATACTGTGAGCGCCATATGCACCGTGGCCGTAACCGTTCAAGAAAGCCTGTGGAAACTACCACAACTAACCCCTCCACCACCGCCGCCGCTGTTGGCGGCGGTGGCGGCGGTTGTTCTCTCAGTTCCAACTCCAACCGTGTTATTGGTGGCGGTGGTGGTCGGCCTTTTTTGACTGTGGAAAGTGGAAATTATTTCTCTACGTGTGGACAAACCCCATCCGTTGATCTTCTCCATCTCAATCAAGGTTCTTGTTCTAATTCCTTATCAGAGAACAAGAAATTCTATGAATCCCACAAAGAGCCTTCCGCCGGAGATGCTAAATCCGACGGCCACATTTTAAGGCATTTTTTCGACGATTGGCCGCGGTCCGAAAATGGTGGTTGTGGGAATGACAACAACAGTGTCAACCAACGAATGAACTCCACGTCTGCTTCGGCAACATCCCTTTCTATTTCGATGCCTGGGAACCCTCCGTCATCGTCTTCTGACGTGTCGTTGAAATTGTCGACCGGAGGAAGTTCTGATCAAGGCAGTGACCACCATATCCACCAAAATGGCAACGTTGACCGAGAACACGTGCAGTTGAATTGGGCTGCAGGATGGGCCGCCACGCAGATGGCGTCAATGGGCGGACCGCTGGCTGAAGCGCTGCGCTCCGCCAACAACTCGTTGCCAACGAGTGTGCTGCATCAGTTGCAAAGAACAACCAACTCGGAAGCTAGCTTTATTAGCACTTGA | 1266 | 49.92 | MDFDLKQCRTQRESEEQQHSAKISKLFVEQTHHLSSSSTSVLPLFVPADSNNNSKTSNILSAFQDSTSSTLPRMLGYFSVAQRQELELQALIFRYMLAGAAVPPELLHPIKKSLISSSSSTPFFLHHPLQHFPHYPTSLLQAGHWGRAAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHMHRGRNRSRKPVETTTTNPSTTAAAVGGGGGGCSLSSNSNRVIGGGGGRPFLTVESGNYFSTCGQTPSVDLLHLNQGSCSNSLSENKKFYESHKEPSAGDAKSDGHILRHFFDDWPRSENGGCGNDNNSVNQRMNSTSASATSLSISMPGNPPSSSSDVSLKLSTGGSSDQGSDHHIHQNGNVDREHVQLNWAAGWAATQMASMGGPLAEALRSANNSLPTSVLHQLQRTTNSEASFIST | 421 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 33261786 | 33263741 | - | CmPI595203_10g026470.1 | Cmu10g2647 | 428177 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g2647 | 421 | ProSiteProfiles | WRC domain profile. | 151 | 195 | IPR014977 | - | |
Cmu10g2647 | 421 | Pfam | WRC | 152 | 194 | IPR014977 | - | |
Cmu10g2647 | 421 | MobiDBLite | consensus disorder prediction | 297 | 360 | - | - | |
Cmu10g2647 | 421 | MobiDBLite | consensus disorder prediction | 302 | 357 | - | - | |
Cmu10g2647 | 421 | ProSiteProfiles | QLQ domain profile. | 77 | 112 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Cmu10g2647 | 421 | SMART | QLQ_2 | 76 | 112 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Cmu10g2647 | 421 | Pfam | QLQ | 78 | 110 | IPR014978 | GO:0005524(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
Cmu10g2647 | 421 | MobiDBLite | consensus disorder prediction | 184 | 211 | - | - | |
Cmu10g2647 | 421 | PANTHER | GROWTH-REGULATING FACTOR 5 | 47 | 336 | IPR031137 | GO:0005634(InterPro)|GO:0006351(InterPro)|GO:0032502(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu05g0230 | Cmu-Chr5:1942471 | Cmu10g2647 | Cmu-Chr10:33261786 | 7.40E-25 | dispersed | |
Cmu08g1608 | Cmu-Chr8:27751258 | Cmu10g2647 | Cmu-Chr10:33261786 | 6.10E-26 | dispersed | |
Cmu10g2647 | Cmu-Chr10:33261786 | Cmu03g2116 | Cmu-Chr3:29587206 | 9.00E-31 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
7055 | PF08879 | WRC | 2.70E-22 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g2647 | - | - | - | 0.0 |