Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2669 ATGATGATGATGATGATGATGATGATGATGGGGAAGGGGAAGGGGAAGGGGAAGGTGGGGGTGAAGATTTTCAGTTCCGCCATAACTTTCTTTTTCACTCTTACCCTTTTGGTCTCTCCTTCTCTTTCTTCAGATGATTCTTCTGCTCTCACTCGCTTCCGTCTTCAAGCTGATTCCCATGGCGGTTTACTAAGAAATTGGACTGGTTCTGATGCTTGTGCTTCTTCATGGCGGGGAGTTCAGTGCTCTGTTAATGGCCGTGTTGTTGCTCTTTCTCTTCCTTCTATGAACTTACGAGGCCCCATTGAGTCTCTAGCGCCGCTCGATCAGCTTCGCCATCTTGACCTCCATGACAACCGTTTGAACGGAACCATTTCGCCGCTTGTTAACTGTACGAATCTTAAACTGTTGTATCTTTCCGGCAATGACTTCTCCGGCGAGATTCCGCCGGAGATCTCGTCTCTCAGGCGACTCCTCCGGCTGGATTTGTCCGATAACAACATCCGCGGTGGAATTCCTGAGGATATTTCTAAATTGTCTAGGCTCCTCACGTTACGTTTGCAGAACAATGTCCTCTCCGGTACGGTGCCTGATCTCTCTGTTTCGCTTGTGAACCTCACTGAACTTAATTTAACCAACAATGAACTGTACGGACGGTTGCCGGACGGGATGTTCAAGAAATTCGGTGAGAAGAGTTTCACTGGAAACGAAGGGGTTTGTGGATCGAGTCCGTTACCGATCTGTTCGGTTACTGGTTCACCGCCGACGTCGGATTCTACCAGAACGGTACCTTCAAATCCAAGTTCATTGCCGCAAAACCCTATTATTAGTCCGAACAGTAAAGAATCTCGAAGAGGGCTCAGCCCTGGGGTGATTGTCGCGATTGTGATCGCGAATTGCGTTGCATTGCTTGTGATTATCTCGTTCATCGTCGCGTATTACTGCGCTCGTGATCGTGATCGGAGTTCGAGTTCCATGACCGGGAGCGAGAGCGGGAAGAGAAGGAAGAGCGGAAGTAGCTACGGAAGCGAGAAGAAAGTGTACGCCAATGGCGGTGGTGACAGTGATGGCACTAACGCGACAGACAGAAGCAAACTAGTGTTCTTCGATTGGAAGAAGCAATTCGAACTTGAAGATTTGCTGAGAGCGTCGGCGGAGATGCTCGGAAAAGGAAGCTTGGGGACGGTTTACCGTGCGGTTCTTGACGACGGTTGTACGGTGGCGGTGAAGAGGTTGAAAGATGCAAACCCATGTCCGAGGAAGGATTTTGAGCAGTATATGGATGTGATTGGGAAGCTGAAACATCCCAATATTGTGAGATTGAGAGCTTTTTACTATGCTAAAGAAGAAAAGCTTCTGGTTTATGATTATCTTCCTAATGGGAGTCTACATTCTCTTCTCCATGGAAATCGAGGCCCAGGGAGGATTCCATTGGATTGGACGACCAGGATCAGTTTAGTTCTGGGAGCTGCTCGTGGCTTAGCAAGAATCCATGGAGAATACAGTGCTTCAAAGATTCCCCATGGGAATGTCAAATCTTCCAATGTTCTTCTTGACAAAAATGGAGTTGCTTGCATTTCTGATTTTGGGTTATCTTTGCTTCTCAACCCAGTCCATGCCATTGCAAGGTTGGGAGGCTACAAGGCCCCAGAACAAGACGAGACTAAACGTCTCTCTCAAAAAGCAGATGTTTATAGCTTTGGAGTCTTATTGCTCGAAGTCTTAACAGGACGTGCACCGTCGCTCTACCCGTCACCTTCGAACCCAAGAAGCGACGACGAAGAGCAGCCAGTGGACCTCCCGAAATGGGTTCGATCCGTGGTGAAGGAAGAGTGGACAGCTGAGGTTTTTGATCCAGAGCTATTAAGGTACAAGAACATTGAGGAGGAGCTTGTGTCCATGCTTCATGTTGGGTTGGCTTGTGTTCTTCCTCAGCCTGAGAAGAGACCAACAATGGCAGAAGTGGCGAAGATGATCGAAGATATTAGGGTCGAGCAATCCCCACTCGGAGAAGATTACGACGAATCGCGCAATTCGCTTTCGCCTTCCCTAGCCACCACAGAAGATGGTATGTAG 2076 48.41 MMMMMMMMMMGKGKGKGKVGVKIFSSAITFFFTLTLLVSPSLSSDDSSALTRFRLQADSHGGLLRNWTGSDACASSWRGVQCSVNGRVVALSLPSMNLRGPIESLAPLDQLRHLDLHDNRLNGTISPLVNCTNLKLLYLSGNDFSGEIPPEISSLRRLLRLDLSDNNIRGGIPEDISKLSRLLTLRLQNNVLSGTVPDLSVSLVNLTELNLTNNELYGRLPDGMFKKFGEKSFTGNEGVCGSSPLPICSVTGSPPTSDSTRTVPSNPSSLPQNPIISPNSKESRRGLSPGVIVAIVIANCVALLVIISFIVAYYCARDRDRSSSSMTGSESGKRRKSGSSYGSEKKVYANGGGDSDGTNATDRSKLVFFDWKKQFELEDLLRASAEMLGKGSLGTVYRAVLDDGCTVAVKRLKDANPCPRKDFEQYMDVIGKLKHPNIVRLRAFYYAKEEKLLVYDYLPNGSLHSLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHGEYSASKIPHGNVKSSNVLLDKNGVACISDFGLSLLLNPVHAIARLGGYKAPEQDETKRLSQKADVYSFGVLLLEVLTGRAPSLYPSPSNPRSDDEEQPVDLPKWVRSVVKEEWTAEVFDPELLRYKNIEEELVSMLHVGLACVLPQPEKRPTMAEVAKMIEDIRVEQSPLGEDYDESRNSLSPSLATTEDGM 691
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 33492269 33494449 + CmPI595203_10g026690.1 Cmu10g2669 428199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2669 691 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 458 671 - -
Cmu10g2669 691 MobiDBLite consensus disorder prediction 250 284 - -
Cmu10g2669 691 Gene3D Phosphorylase Kinase; domain 1 355 457 - -
Cmu10g2669 691 FunFam pollen receptor-like kinase 1 353 457 - -
Cmu10g2669 691 SUPERFAMILY Protein kinase-like (PK-like) 386 659 IPR011009 -
Cmu10g2669 691 FunFam Leucine-rich repeat receptor-like protein kinase 43 198 - -
Cmu10g2669 691 Pfam Protein tyrosine and serine/threonine kinase 386 657 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu10g2669 691 Gene3D Ribonuclease Inhibitor 130 249 IPR032675 -
Cmu10g2669 691 Gene3D Transferase(Phosphotransferase) domain 1 458 680 - -
Cmu10g2669 691 Pfam Leucine Rich Repeat 158 179 IPR001611 GO:0005515(InterPro)
Cmu10g2669 691 Pfam Leucine Rich Repeat 205 223 IPR001611 GO:0005515(InterPro)
Cmu10g2669 691 Pfam Leucine rich repeat N-terminal domain 44 83 IPR013210 -
Cmu10g2669 691 SUPERFAMILY L domain-like 44 224 - -
Cmu10g2669 691 PANTHER OS05G0588300 PROTEIN 29 668 IPR050994 -
Cmu10g2669 691 MobiDBLite consensus disorder prediction 250 285 - -
Cmu10g2669 691 CDD STKc_IRAK 388 662 - -
Cmu10g2669 691 ProSiteProfiles Protein kinase domain profile. 382 664 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2669 691 MobiDBLite consensus disorder prediction 321 356 - -
Cmu10g2669 691 MobiDBLite consensus disorder prediction 321 336 - -
Cmu10g2669 691 Pfam Leucine Rich repeats (2 copies) 110 145 IPR025875 -
Cmu10g2669 691 MobiDBLite consensus disorder prediction 666 691 - -
Cmu10g2669 691 Gene3D Ribonuclease Inhibitor 40 129 IPR032675 -
Cmu10g2669 691 ProSiteProfiles Leucine-rich repeat profile. 110 132 IPR001611 GO:0005515(InterPro)
Cmu10g2669 691 MobiDBLite consensus disorder prediction 673 691 - -
Cmu10g2669 691 SMART LRR_typ_2 108 132 IPR003591 -
Cmu10g2669 691 SMART LRR_typ_2 203 227 IPR003591 -
Cmu10g2669 691 SMART LRR_typ_2 155 179 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g2303 Cmu-Chr5:32342006 Cmu10g2669 Cmu-Chr10:33492269 1.20E-62 dispersed
Cmu06g1097 Cmu-Chr6:21316965 Cmu10g2669 Cmu-Chr10:33492269 3.20E-91 dispersed
Cmu07g0717 Cmu-Chr7:14136578 Cmu10g2669 Cmu-Chr10:33492269 2.50E-72 dispersed
Cmu09g2017 Cmu-Chr9:36246514 Cmu10g2669 Cmu-Chr10:33492269 3.60E-52 dispersed
Cmu10g2669 Cmu-Chr10:33492269 Cmu11g0135 Cmu-Chr11:1914901 1.90E-70 dispersed
Cmu10g2669 Cmu-Chr10:33492269 Cmu11g0257 Cmu-Chr11:3111452 6.70E-92 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75872 PF00069 Pkinase 3.30E-33 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2669 - - - 0.0