Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g2786 | ATGATTTGGATTCCTTGTTCTGGAAATTCAAACAGGAAACTCAAGTCCAAGAAATTGAAGAAGTTGGAATCTCAGAAGACTCGAGTTGATCCGATCAACGGGAAACTAAAAACAAATTCCTCCTTCAGTGAAAACTCCAAAGGTGGAGGATCTGATCCTATCAAGGCACAGATATTTTCCTTCCGGGAGTTGGCAGCTGCTACCAGGAATTTTAGGGCAGACTGTCTTTTGGGAGAAGGAGGTTTTGGTAGAGTTTACAAGGGAAAGTTAGAAAGCATCAATCAGGTTGTGGCAATCAAACAACTCGATCGCAATGGGTCGCAAGGGAACAGAGAGTTTCTTGTTGAAGTATTGATGTTAAGCCTGCTTCATCACCCAAATCTAGTTAATCTGATCGGTTATTGTGCTGATGGAGATCAAAGGCTTCTGATATATGAATATATGCCTCTAGGATCTTTAGATGACCATTTACATGACATTTCACCTGGTACAAAGGTTCTAGATTGGAATACAAGGATGAAAATAGCTGCTGGGGCAGCACGAGGGTTGGAATATTTGCATGACAAAGCTAGCCCGCCGGTTATTTATCGAGATTTAAAAAGTTCCAACATTCTGCTTGATAAAGGTTATCATCCCAAACTATCTGATTTTGGATTGGCCAAACTTGGGCCTGTTGGGGATAATACACATGTATCTACCAGAGTTATGGGTACTTACGGATATTGCGCTCCCGAGTATGCAATGACTGGTCAGTTAACTCTCAAGTCGGATGTTTATAGCTTCGGTGTTGTCCTTCTAGAAATCATAACAGGCAGGAAAGCAATTGATGATTCAAGAGCTGCAGGGGAGCAGAATCTGGTTTCTTGGGCAAGACCATTATTTAAAGACCGTCTGAGATTTGCTCAAATGGCAGATCCAATGCTTAGAGGCCAATACCCTTCAAGGGGTTTGTATCAGGCTCTTGCAATTGCAGCAATGTGTGTTCAAGAGCAGCCAAATATGCGACCCGTAATTGCCGATGTCGTCACAGCTTTATCTTATCTTGCTTCCCAAAGATACAACCCTGGTACGAACATACCCCACGACTCCCCTGGATCTGCTTGTACTCCTCCAAGAACCAACAGAGATTCTGATAGGAAGGTTAATGGGGGTAGAAGATACGACAGAAATCCAACTAAACGACTATAA | 1188 | 42.68 | MIWIPCSGNSNRKLKSKKLKKLESQKTRVDPINGKLKTNSSFSENSKGGGSDPIKAQIFSFRELAAATRNFRADCLLGEGGFGRVYKGKLESINQVVAIKQLDRNGSQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLIYEYMPLGSLDDHLHDISPGTKVLDWNTRMKIAAGAARGLEYLHDKASPPVIYRDLKSSNILLDKGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDDSRAAGEQNLVSWARPLFKDRLRFAQMADPMLRGQYPSRGLYQALAIAAMCVQEQPNMRPVIADVVTALSYLASQRYNPGTNIPHDSPGSACTPPRTNRDSDRKVNGGRRYDRNPTKRL | 395 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 34455541 | 34458365 | + | CmPI595203_10g027860.1 | Cmu10g2786 | 428316 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g2786 | 395 | MobiDBLite | consensus disorder prediction | 356 | 372 | - | - | |
Cmu10g2786 | 395 | Gene3D | Phosphorylase Kinase; domain 1 | 44 | 147 | - | - | |
Cmu10g2786 | 395 | SMART | serkin_6 | 71 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu10g2786 | 395 | MobiDBLite | consensus disorder prediction | 356 | 395 | - | - | |
Cmu10g2786 | 395 | MobiDBLite | consensus disorder prediction | 31 | 50 | - | - | |
Cmu10g2786 | 395 | Pfam | Protein tyrosine and serine/threonine kinase | 75 | 344 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu10g2786 | 395 | Gene3D | Transferase(Phosphotransferase) domain 1 | 148 | 359 | - | - | |
Cmu10g2786 | 395 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 194 | 206 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu10g2786 | 395 | MobiDBLite | consensus disorder prediction | 15 | 51 | - | - | |
Cmu10g2786 | 395 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 100 | IPR017441 | GO:0005524(InterPro) | |
Cmu10g2786 | 395 | PANTHER | OS07G0668900 PROTEIN | 25 | 360 | - | - | |
Cmu10g2786 | 395 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 345 | IPR011009 | - | |
Cmu10g2786 | 395 | MobiDBLite | consensus disorder prediction | 373 | 395 | - | - | |
Cmu10g2786 | 395 | CDD | STKc_IRAK | 77 | 345 | - | - | |
Cmu10g2786 | 395 | FunFam | Serine/threonine-protein kinase PBS1 | 44 | 147 | - | - | |
Cmu10g2786 | 395 | ProSiteProfiles | Protein kinase domain profile. | 71 | 348 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu10g2786 | 395 | FunFam | Serine/threonine-protein kinase PBS1 | 148 | 363 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu03g0832 | Cmu-Chr3:2664692 | Cmu10g2786 | Cmu-Chr10:34455541 | 1.30E-144 | dispersed | |
Cmu05g0647 | Cmu-Chr5:5533543 | Cmu10g2786 | Cmu-Chr10:34455541 | 7.20E-150 | dispersed | |
Cmu06g0182 | Cmu-Chr6:1924695 | Cmu10g2786 | Cmu-Chr10:34455541 | 9.30E-146 | dispersed | |
Cmu09g0875 | Cmu-Chr9:8538959 | Cmu10g2786 | Cmu-Chr10:34455541 | 1.40E-130 | dispersed | |
Cmu10g1360 | Cmu-Chr10:6560225 | Cmu10g2786 | Cmu-Chr10:34455541 | 1.70E-132 | dispersed | |
Cmu10g1924 | Cmu-Chr10:24654674 | Cmu10g2786 | Cmu-Chr10:34455541 | 4.80E-86 | dispersed | |
Cmu10g2786 | Cmu-Chr10:34455541 | Cmu11g1861 | Cmu-Chr11:30763322 | 2.20E-124 | dispersed | |
Cmu10g2786 | Cmu-Chr10:34455541 | Cmu02g2065 | Cmu-Chr2:34297523 | 5.90E-133 | wgd | |
Cmu10g2786 | Cmu-Chr10:34455541 | Cmu02g1369 | Cmu-Chr2:27264732 | 2.40E-163 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75876 | PF07714 | PK_Tyr_Ser-Thr | 1.40E-46 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g2786 | - | - | - | 0.0 |