Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2786 ATGATTTGGATTCCTTGTTCTGGAAATTCAAACAGGAAACTCAAGTCCAAGAAATTGAAGAAGTTGGAATCTCAGAAGACTCGAGTTGATCCGATCAACGGGAAACTAAAAACAAATTCCTCCTTCAGTGAAAACTCCAAAGGTGGAGGATCTGATCCTATCAAGGCACAGATATTTTCCTTCCGGGAGTTGGCAGCTGCTACCAGGAATTTTAGGGCAGACTGTCTTTTGGGAGAAGGAGGTTTTGGTAGAGTTTACAAGGGAAAGTTAGAAAGCATCAATCAGGTTGTGGCAATCAAACAACTCGATCGCAATGGGTCGCAAGGGAACAGAGAGTTTCTTGTTGAAGTATTGATGTTAAGCCTGCTTCATCACCCAAATCTAGTTAATCTGATCGGTTATTGTGCTGATGGAGATCAAAGGCTTCTGATATATGAATATATGCCTCTAGGATCTTTAGATGACCATTTACATGACATTTCACCTGGTACAAAGGTTCTAGATTGGAATACAAGGATGAAAATAGCTGCTGGGGCAGCACGAGGGTTGGAATATTTGCATGACAAAGCTAGCCCGCCGGTTATTTATCGAGATTTAAAAAGTTCCAACATTCTGCTTGATAAAGGTTATCATCCCAAACTATCTGATTTTGGATTGGCCAAACTTGGGCCTGTTGGGGATAATACACATGTATCTACCAGAGTTATGGGTACTTACGGATATTGCGCTCCCGAGTATGCAATGACTGGTCAGTTAACTCTCAAGTCGGATGTTTATAGCTTCGGTGTTGTCCTTCTAGAAATCATAACAGGCAGGAAAGCAATTGATGATTCAAGAGCTGCAGGGGAGCAGAATCTGGTTTCTTGGGCAAGACCATTATTTAAAGACCGTCTGAGATTTGCTCAAATGGCAGATCCAATGCTTAGAGGCCAATACCCTTCAAGGGGTTTGTATCAGGCTCTTGCAATTGCAGCAATGTGTGTTCAAGAGCAGCCAAATATGCGACCCGTAATTGCCGATGTCGTCACAGCTTTATCTTATCTTGCTTCCCAAAGATACAACCCTGGTACGAACATACCCCACGACTCCCCTGGATCTGCTTGTACTCCTCCAAGAACCAACAGAGATTCTGATAGGAAGGTTAATGGGGGTAGAAGATACGACAGAAATCCAACTAAACGACTATAA 1188 42.68 MIWIPCSGNSNRKLKSKKLKKLESQKTRVDPINGKLKTNSSFSENSKGGGSDPIKAQIFSFRELAAATRNFRADCLLGEGGFGRVYKGKLESINQVVAIKQLDRNGSQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLIYEYMPLGSLDDHLHDISPGTKVLDWNTRMKIAAGAARGLEYLHDKASPPVIYRDLKSSNILLDKGYHPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVLLEIITGRKAIDDSRAAGEQNLVSWARPLFKDRLRFAQMADPMLRGQYPSRGLYQALAIAAMCVQEQPNMRPVIADVVTALSYLASQRYNPGTNIPHDSPGSACTPPRTNRDSDRKVNGGRRYDRNPTKRL 395
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 34455541 34458365 + CmPI595203_10g027860.1 Cmu10g2786 428316
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2786 395 MobiDBLite consensus disorder prediction 356 372 - -
Cmu10g2786 395 Gene3D Phosphorylase Kinase; domain 1 44 147 - -
Cmu10g2786 395 SMART serkin_6 71 348 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2786 395 MobiDBLite consensus disorder prediction 356 395 - -
Cmu10g2786 395 MobiDBLite consensus disorder prediction 31 50 - -
Cmu10g2786 395 Pfam Protein tyrosine and serine/threonine kinase 75 344 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu10g2786 395 Gene3D Transferase(Phosphotransferase) domain 1 148 359 - -
Cmu10g2786 395 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu10g2786 395 MobiDBLite consensus disorder prediction 15 51 - -
Cmu10g2786 395 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524(InterPro)
Cmu10g2786 395 PANTHER OS07G0668900 PROTEIN 25 360 - -
Cmu10g2786 395 SUPERFAMILY Protein kinase-like (PK-like) 54 345 IPR011009 -
Cmu10g2786 395 MobiDBLite consensus disorder prediction 373 395 - -
Cmu10g2786 395 CDD STKc_IRAK 77 345 - -
Cmu10g2786 395 FunFam Serine/threonine-protein kinase PBS1 44 147 - -
Cmu10g2786 395 ProSiteProfiles Protein kinase domain profile. 71 348 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2786 395 FunFam Serine/threonine-protein kinase PBS1 148 363 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g0832 Cmu-Chr3:2664692 Cmu10g2786 Cmu-Chr10:34455541 1.30E-144 dispersed
Cmu05g0647 Cmu-Chr5:5533543 Cmu10g2786 Cmu-Chr10:34455541 7.20E-150 dispersed
Cmu06g0182 Cmu-Chr6:1924695 Cmu10g2786 Cmu-Chr10:34455541 9.30E-146 dispersed
Cmu09g0875 Cmu-Chr9:8538959 Cmu10g2786 Cmu-Chr10:34455541 1.40E-130 dispersed
Cmu10g1360 Cmu-Chr10:6560225 Cmu10g2786 Cmu-Chr10:34455541 1.70E-132 dispersed
Cmu10g1924 Cmu-Chr10:24654674 Cmu10g2786 Cmu-Chr10:34455541 4.80E-86 dispersed
Cmu10g2786 Cmu-Chr10:34455541 Cmu11g1861 Cmu-Chr11:30763322 2.20E-124 dispersed
Cmu10g2786 Cmu-Chr10:34455541 Cmu02g2065 Cmu-Chr2:34297523 5.90E-133 wgd
Cmu10g2786 Cmu-Chr10:34455541 Cmu02g1369 Cmu-Chr2:27264732 2.40E-163 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75876 PF07714 PK_Tyr_Ser-Thr 1.40E-46 CL0016 Cmu PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2786 - - - 0.0