Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2790 ATGGGTGATGATGATAAGGTGATTGGAAATGCTCAGTCTGTTCCTGGAAGATGGCACAGAAGCAAAGGCCAAACCCATAAATCCCAGATTCAAGAAACTCCTGTAATTTTGTGTCCAGTGACTGGCCTTTTAGAAAAAATGGTTAAACCCTGCTGGAAGCCTCATGATGATGGCGATTCAAACGGACGAGTTGATGGGTTGTTGTGGTCTAAGGATCTGGGGCACCATGTTTATGGACAATTCTCCATGGCAGTAATCCAAGCCAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCGTTGAGTATGACCAATCCAGGTCCGCAGGGGACCTTTGTAGGAGTTTATGATGGCCATGGCGGAACCGAAGCTTCACGGTTTGTCAATGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTACACCAAGACATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGGTTTCTCTCTCTTGTCCAGAAACAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTAGGGATCATATGCAATGGACAGCTATATATTGCAAATGCAGGCGATTCACGAGTAGTGCTGGGGAGAACTGAGAGAGCCACTAGAGAAGTCATTGCCATTCAATTGTCCACAGAACACAATGCAAGCATAGAGTCTGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCCCAGATTGTGATCCTAAAGCACAATGTTTGGCGTGTTAAAGGTCTCATACAGGTTTCAAGATCCATTGGTGATGCATATTTGAAAAAAGCAAAGTTCAATAGACCTCCTCTCCCGCCTAAATTTCAACTGCCTGAGCCATTTTACAAACCGATCCTCAGCGCAGAACCGTCAATACTGGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGTCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATCCCCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCAAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGATAGAGGTGTGAGAAGGCATTTCCACGATGACATTTCTGTTGTAGTTGTGTTCTTAGATCCTCATTTGATCAATGGCAGGCCCTCCCCTTGTTCCTTATCAATCAAAGGAGGAGAAGGTCTCCCCTCATCGGCAAACTCCTAG 1251 44.6 MGDDDKVIGNAQSVPGRWHRSKGQTHKSQIQETPVILCPVTGLLEKMVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQDISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATREVIAIQLSTEHNASIESVRDELRMVHPEDPQIVILKHNVWRVKGLIQVSRSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRNGIARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPHLINGRPSPCSLSIKGGEGLPSSANS 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34491879 34494287 - CmPI595203_10g027900.1 Cmu10g2790 428320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2790 416 CDD PP2Cc 78 388 IPR001932 -
Cmu10g2790 416 ProSiteProfiles PPM-type phosphatase domain profile. 80 388 IPR001932 -
Cmu10g2790 416 PANTHER PROTEIN PHOSPHATASE 73 387 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu10g2790 416 ProSitePatterns PPM-type phosphatase domain signature. 114 122 IPR000222 GO:0043169(InterPro)
Cmu10g2790 416 SUPERFAMILY PP2C-like 79 390 IPR036457 -
Cmu10g2790 416 Gene3D - 69 395 IPR036457 -
Cmu10g2790 416 Pfam Protein phosphatase 2C 110 357 IPR001932 -
Cmu10g2790 416 SMART PP2C_4 58 386 IPR001932 -
Cmu10g2790 416 MobiDBLite consensus disorder prediction 1 30 - -
Cmu10g2790 416 FunFam Phosphatase 2C family protein 69 397 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g0895 Cmu-Chr10:994325 Cmu10g2790 Cmu-Chr10:34491879 2.30E-137 dispersed
Cmu10g1030 Cmu-Chr10:2277504 Cmu10g2790 Cmu-Chr10:34491879 8.10E-28 dispersed
Cmu10g2488 Cmu-Chr10:31532324 Cmu10g2790 Cmu-Chr10:34491879 3.80E-116 dispersed
Cmu10g2790 Cmu-Chr10:34491879 Cmu11g0873 Cmu-Chr11:11452378 1.20E-22 dispersed
Cmu10g2790 Cmu-Chr10:34491879 Cmu02g1365 Cmu-Chr2:27213338 8.00E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2790 K01102 - csv:101210750 738.413