Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu10g2790 | ATGGGTGATGATGATAAGGTGATTGGAAATGCTCAGTCTGTTCCTGGAAGATGGCACAGAAGCAAAGGCCAAACCCATAAATCCCAGATTCAAGAAACTCCTGTAATTTTGTGTCCAGTGACTGGCCTTTTAGAAAAAATGGTTAAACCCTGCTGGAAGCCTCATGATGATGGCGATTCAAACGGACGAGTTGATGGGTTGTTGTGGTCTAAGGATCTGGGGCACCATGTTTATGGACAATTCTCCATGGCAGTAATCCAAGCCAATAATGTGGTGGAAGATCAAAGCCAGCTTGAATCTGGGGCGTTGAGTATGACCAATCCAGGTCCGCAGGGGACCTTTGTAGGAGTTTATGATGGCCATGGCGGAACCGAAGCTTCACGGTTTGTCAATGACAATCTCTTCAGCAATCTCAAAAGATATGCATCTTTACACCAAGACATATCAGAAAACGTTATCAGGAAGGCTTTTGCAGCAACAGAAGAGGGGTTTCTCTCTCTTGTCCAGAAACAGTGGCTTAATGAACCAAAGATTGCATCTGCTGGATCATGTTGTTTGGTAGGGATCATATGCAATGGACAGCTATATATTGCAAATGCAGGCGATTCACGAGTAGTGCTGGGGAGAACTGAGAGAGCCACTAGAGAAGTCATTGCCATTCAATTGTCCACAGAACACAATGCAAGCATAGAGTCTGTGAGAGATGAACTTCGGATGGTTCATCCAGAAGATCCCCAGATTGTGATCCTAAAGCACAATGTTTGGCGTGTTAAAGGTCTCATACAGGTTTCAAGATCCATTGGTGATGCATATTTGAAAAAAGCAAAGTTCAATAGACCTCCTCTCCCGCCTAAATTTCAACTGCCTGAGCCATTTTACAAACCGATCCTCAGCGCAGAACCGTCAATACTGGTACACAAACTCCGCCCAGATGATCAATATCTCATATTTGCTTCTGATGGTCTGTGGGAGCACCTTAGCAACCAGAAGGCTGTTGACATCGTCAACAGCTATCCCCGAAATGGAATAGCAAGGAGACTTGTCAAGGCTGCACTTCAAGAAGCAGCTAAAAAAAGAGAGATGAGATATTCAGACCTGAAAAAGATAGATAGAGGTGTGAGAAGGCATTTCCACGATGACATTTCTGTTGTAGTTGTGTTCTTAGATCCTCATTTGATCAATGGCAGGCCCTCCCCTTGTTCCTTATCAATCAAAGGAGGAGAAGGTCTCCCCTCATCGGCAAACTCCTAG | 1251 | 44.6 | MGDDDKVIGNAQSVPGRWHRSKGQTHKSQIQETPVILCPVTGLLEKMVKPCWKPHDDGDSNGRVDGLLWSKDLGHHVYGQFSMAVIQANNVVEDQSQLESGALSMTNPGPQGTFVGVYDGHGGTEASRFVNDNLFSNLKRYASLHQDISENVIRKAFAATEEGFLSLVQKQWLNEPKIASAGSCCLVGIICNGQLYIANAGDSRVVLGRTERATREVIAIQLSTEHNASIESVRDELRMVHPEDPQIVILKHNVWRVKGLIQVSRSIGDAYLKKAKFNRPPLPPKFQLPEPFYKPILSAEPSILVHKLRPDDQYLIFASDGLWEHLSNQKAVDIVNSYPRNGIARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDISVVVVFLDPHLINGRPSPCSLSIKGGEGLPSSANS | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 34491879 | 34494287 | - | CmPI595203_10g027900.1 | Cmu10g2790 | 428320 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu10g2790 | 416 | CDD | PP2Cc | 78 | 388 | IPR001932 | - | |
Cmu10g2790 | 416 | ProSiteProfiles | PPM-type phosphatase domain profile. | 80 | 388 | IPR001932 | - | |
Cmu10g2790 | 416 | PANTHER | PROTEIN PHOSPHATASE | 73 | 387 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cmu10g2790 | 416 | ProSitePatterns | PPM-type phosphatase domain signature. | 114 | 122 | IPR000222 | GO:0043169(InterPro) | |
Cmu10g2790 | 416 | SUPERFAMILY | PP2C-like | 79 | 390 | IPR036457 | - | |
Cmu10g2790 | 416 | Gene3D | - | 69 | 395 | IPR036457 | - | |
Cmu10g2790 | 416 | Pfam | Protein phosphatase 2C | 110 | 357 | IPR001932 | - | |
Cmu10g2790 | 416 | SMART | PP2C_4 | 58 | 386 | IPR001932 | - | |
Cmu10g2790 | 416 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Cmu10g2790 | 416 | FunFam | Phosphatase 2C family protein | 69 | 397 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu10g0895 | Cmu-Chr10:994325 | Cmu10g2790 | Cmu-Chr10:34491879 | 2.30E-137 | dispersed | |
Cmu10g1030 | Cmu-Chr10:2277504 | Cmu10g2790 | Cmu-Chr10:34491879 | 8.10E-28 | dispersed | |
Cmu10g2488 | Cmu-Chr10:31532324 | Cmu10g2790 | Cmu-Chr10:34491879 | 3.80E-116 | dispersed | |
Cmu10g2790 | Cmu-Chr10:34491879 | Cmu11g0873 | Cmu-Chr11:11452378 | 1.20E-22 | dispersed | |
Cmu10g2790 | Cmu-Chr10:34491879 | Cmu02g1365 | Cmu-Chr2:27213338 | 8.00E-149 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu10g2790 | K01102 | - | csv:101210750 | 738.413 |