Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2801 ATGCCGAGAAAAGGAATGAGGAGTCTCCTTTTCCAGTTCTCGTCGCCGTCGAATTCCATTTCCAGGTATTCCATCTCGTCGCCGTCCAGAACTCCGGCATCGACTCCACGCCGGAGCTTCAACGACGCGATGATCGAACAGAGCATCGAATCTGCCGCGGCGATTGTGATGAAATGGAATCCAGATTCTTCAACGTACGCCAAAGTTACTTCCATGTTCTATGAAGACAAAAGAGAAGCCATGCAGTTCATTAAGCGTGTGAATGATCTTCAAAAAGCGATGCATCTTATTGCTTCGGAAGATTCCGCTTCCGCTTCCGATCGCCTTGTTTACGCTCAAACTTTGATGGAAATCGCCATGAAAAGACTTCAGAAGGAGTTTTATCAGATTCTCTCCATGAATCGTGCTCATCTAGATCCGGAATCTGTTTCCACTAGATCCTCTCGCTGCTCCACCAGATCGAGCACTTCCGTTGATTTCGACGATGACGGAACCCTAGACGATGAAATCCAAGCCATAGACGATTCGATCTCTGAAGTTGAGCAAGTTTCTTTCATTGTAATGGAGGATTTACGAGCCATAGCCGAGTGTATGATCTCCTCTGGCTACGCTAAAGAATGCGTTAATATGTATAAAGTGATTCGAAAATCGATTATCGATGAAGGTGTGTACCGCCTCGGACTTGAGAAATTGAGCGCTTCGAGAATCAACAAAATGGATTGGGAGGTGCTTGATCTTAAAATCAAGAACTGGTTGGATGCAATTAAACTCGCAATTAGAACGTTGTTCGTTGGCGAACGAATTCTCTGTGATCACGTCTTTTCCTCTTCTGAATCCATTAGAGAATCATGTTTTGCTGATATATCTAGAGAAGGCGCTCTGCTTCTGTTTGGATTCCCTGAACTTGTTGCAAAGAGTAAAAAGTCTCCGGAAAAAATGTTCCGTGTTCTTGATATGTACTCATCAATCTCCGAAAATTGGCCGGACATCGAATCGATTTTCTCGTCTGAATCCTCATCTGTAGTTCGATCTCAAGCTCTAACCTCACTCGCGAAACTCGGCGAGTTAGTCCGGGCCATAGTTATGGATCTCGAAGTCTCGATTCAGAAAAACTCATCCAAATCGCCGGTTGCTGGGGGTGGCGTTCATTCCTTAACGCTTCTCTCGATGAACTACCTCACTTTCCTCGCCGATTACGGCAATATTTTGACGGATATTTTCGCTGATTGGACTCCGCCTGAAAAATCCTCTCTCGAACAAATCTTCTTCAACAGTTCAGAATCCGACGATTCTCCAACGGCTTCAGCAATCTCTTTACGAATGGGATGGCTAATTCTAGTCCTCCTCTGCAAACTCGACAGCAAAGCAAAGCGCTACAATGACGTTTCACTCTCGTATCTGTTCCTCGCTAACAATCTTCAACACATCGTCTCTAAAGTCCGATCGTCGAATCTTCAGTACCTTCTCGGCGACGAGTGGATCACGAAGCAGGAGGCGAAAGTAAGGCAATTCGCGGCGAAGTACGAAGCATTGGCTTGGGGAAGAGTCTTCGATTCTTTGCCGGAGAATCCAACTGAGAGATTCTCACAGGAAGAAGCCAAAGAAATCTTCAGGAATTTCAATATGGCATTCCAAGAAACTCATCGGAAACAGAAATCTTTCTTCATTCCTGATTCAAAGCTTAGAGACGAAGTTAAATTATCAATCGGTAGAAAGCTTGTTTGGTTCTATGGAGAATTTTACAGAGCGCAAAAAGCTTATGCTGGTGGTAATGAAAAGCCGTACATCAGATTCTCCCCGGAAGATATCGGTAACTACCTTTCAGATCTCTATTTTGAACCGTCCGATTGGGCGAGCGTTTCCACCTCGTCGCCGTCGTCCACCTCCTCCTCTCACCGGCGGGAACCGGGACCCCGCTAA 1920 45.57 MPRKGMRSLLFQFSSPSNSISRYSISSPSRTPASTPRRSFNDAMIEQSIESAAAIVMKWNPDSSTYAKVTSMFYEDKREAMQFIKRVNDLQKAMHLIASEDSASASDRLVYAQTLMEIAMKRLQKEFYQILSMNRAHLDPESVSTRSSRCSTRSSTSVDFDDDGTLDDEIQAIDDSISEVEQVSFIVMEDLRAIAECMISSGYAKECVNMYKVIRKSIIDEGVYRLGLEKLSASRINKMDWEVLDLKIKNWLDAIKLAIRTLFVGERILCDHVFSSSESIRESCFADISREGALLLFGFPELVAKSKKSPEKMFRVLDMYSSISENWPDIESIFSSESSSVVRSQALTSLAKLGELVRAIVMDLEVSIQKNSSKSPVAGGGVHSLTLLSMNYLTFLADYGNILTDIFADWTPPEKSSLEQIFFNSSESDDSPTASAISLRMGWLILVLLCKLDSKAKRYNDVSLSYLFLANNLQHIVSKVRSSNLQYLLGDEWITKQEAKVRQFAAKYEALAWGRVFDSLPENPTERFSQEEAKEIFRNFNMAFQETHRKQKSFFIPDSKLRDEVKLSIGRKLVWFYGEFYRAQKAYAGGNEKPYIRFSPEDIGNYLSDLYFEPSDWASVSTSSPSSTSSSHRREPGPR 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34569013 34570932 - CmPI595203_10g028010.1 Cmu10g2801 428331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2801 639 Pfam Exocyst complex component Exo70 N-terminal 49 132 - -
Cmu10g2801 639 SUPERFAMILY Cullin repeat-like 75 611 IPR016159 -
Cmu10g2801 639 MobiDBLite consensus disorder prediction 617 639 - -
Cmu10g2801 639 Pfam Exo70 exocyst complex subunit C-terminal 249 609 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cmu10g2801 639 FunFam Exocyst subunit Exo70 family protein 66 618 - -
Cmu10g2801 639 Gene3D Exocyst complex component Exo70 56 617 - -
Cmu10g2801 639 PANTHER EXOCYST COMPLEX PROTEIN EXO70 47 612 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cmu10g2801 639 MobiDBLite consensus disorder prediction 18 38 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2057 Cmu-Chr2:34226190 Cmu10g2801 Cmu-Chr10:34569013 7.30E-178 dispersed
Cmu03g0819 Cmu-Chr3:2474277 Cmu10g2801 Cmu-Chr10:34569013 7.20E-165 dispersed
Cmu10g2801 Cmu-Chr10:34569013 Cmu11g0607 Cmu-Chr11:6646016 8.30E-12 dispersed
Cmu01g0835 Cmu-Chr1:9902151 Cmu10g2801 Cmu-Chr10:34569013 1.80E-71 transposed
Cmu10g2801 Cmu-Chr10:34569013 Cmu02g1351 Cmu-Chr2:26968930 2.10E-140 wgd
Cmu10g2801 Cmu-Chr10:34569013 Cmu04g0890 Cmu-Chr4:23430537 3.10E-144 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2801 K07195 - csv:101208543 1098.96