Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2847 ATGGCCCAACTCTGTTTTCTCTGTTTCTTCTTCTTCCTCTGCGTCGCCGGCCCCGCCGCATCTCAGCAGCTCTACTTCGCTGGATTTCATGACGCCGCCGCCACCGCCGCCAACTTAACCCTCACTGACATCGCCAAGATCGAGCAGAACGGAATCTTAAAGCTCACAAATGACACCAGTCGATTACAGGGTCATGCCTTTTACAGTTCCCCTGTTCGCTTCAAAAACTCTTCCGACGGCAAAGCTTTTTCCTTCTCCACCGCTTTTGTCATCGCCGTCGTCCCCGAATACCCGACTCTAGGCGGCCATGGACTCGCCTTCACCATTGCCCATTCGAAGAACCTCCGTGGACTTCCCAGTCAGTATTTAGGCCTTCTCAATGCGACCGACGTCGGAAACTTCACGAACCATCTCTTCGCCGTCGAGTTCGACACCGTTCAAGATTTTGAGTTCGGCGACATCAACGACAACCACGTCGGAATCAATCTCAACAATATGGTTTCTAATGCCTCCACCACCGCTTCCTATTTCGTCGACGATGGACCCAACAAGCAGAATCTAACCCTAAAAAGTGGGAGGCCGATTCAAGCTTGGATCGATTACGATTCCTCTGTAAATTCACTCACGGTTGCGCTTTCTCCGTTTTCAACCAAACCCAAGAAGCCGATTCTGTCGTTTAATGTAGATCTCTCTCCGATTCTTCAGGAGTCTATGTACGTTGGGTTCTCGGCCTCAACTGGGCTTCTTGCAAGTTCGCACTATGTGTTGGGATGGAGTTTCAGTATGAATGGACCAGCTGAGTCTCTGGATCTGTCTTCTTTGCCTTCTGTTCCAGGTCCGAAGAAGAAGCACACTGGTTTTACAATTGGGGTTTCTGTTGCGGCCGTTTTGATTGTGGTAATCGCGATTTGTGTTGCTGTTTTAATCATTTGGAAGATAAAAAACGCTGATATAATCGAGGCCTGGGAGCACGAAATCGGCCCTCATCGGTACTCTTACAAGGAGCTTAAGCAAGCGACTAAGCGATTTAGGGATAAAGAGCTCTTAGGGCGCGGTGGGTTTGGGAAAGTTTACAAAGGGACTTTGCCGAATTCGAAAACCCAAGTGGCTGTGAAGCGGATTTCTCACGAATCGAAACAGGGCCTAAGGGAATTTGTGTCGGAAATCGCTAGCATTGGCCGGCTTCGTCACCGGAACTTGGTTCAGTTGCTGGGATGGTGTCGCCGCCGTGGCGATCTGCTTCTGGTTTATGATTTCATGGCTAATGGGAGCTTGGATAACTACATTTTCGACGACCCGGATGTGAATCTGAGTTGGGAACAAAGGTTCAGAATCATTAAGGGCGTCGCCTCCGGTTTGCTCTACTTGCACGAAGGCTACGAGCAGGTGGTGATTCATAGAGATGTGAAAGCCAGTAATGTCCTGCTCGACGGCGAGATGAATGGGAAGCTCGGCGATTTCGGCCTGGCTCGACTATACGAACACGGGGCAAACCCGAGCACGACTCGGGTCGTCGGCACTCTGGGATATCTGGCGCCGGAGTTACCCAGAACAGGGAAGGCCACCACCAGCTCAGATGTGTATGCCTTCGGCGCACTTCTGCTAGAAGTGGCTTGCGGACGGCGGCCGATCGACCCGAAATCGTCGTCGGAAGAGCTAGTGCTGGTGGATTGGGTGTGGGAGAATTACAGGGAAGGGAAATTGCTGGAAGTAATGGATCCAAAATTGAAAGGGGATTTCAATGTAGCTGAGGCAGTGATGATTTTGAAGCTGGGGTTGTTCTGTTCGAACGATTCGGCGGCGGCGCGGCCTACTATGAGGCAGGTGGTGAGGTTTCTGGAGGGGGAGATTGGAGTTCCTGAGGAGATATCAGCGCCGAAAGTGGTGGAAGGAGGGAGGAATGGTGAAGGGTTCGATGATTTTGTGAATTCATTTGCATCTTCTTCCTTTAACAAGGGTAATTTTTACAGATGA 1974 50.76 MAQLCFLCFFFFLCVAGPAASQQLYFAGFHDAAATAANLTLTDIAKIEQNGILKLTNDTSRLQGHAFYSSPVRFKNSSDGKAFSFSTAFVIAVVPEYPTLGGHGLAFTIAHSKNLRGLPSQYLGLLNATDVGNFTNHLFAVEFDTVQDFEFGDINDNHVGINLNNMVSNASTTASYFVDDGPNKQNLTLKSGRPIQAWIDYDSSVNSLTVALSPFSTKPKKPILSFNVDLSPILQESMYVGFSASTGLLASSHYVLGWSFSMNGPAESLDLSSLPSVPGPKKKHTGFTIGVSVAAVLIVVIAICVAVLIIWKIKNADIIEAWEHEIGPHRYSYKELKQATKRFRDKELLGRGGFGKVYKGTLPNSKTQVAVKRISHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDNYIFDDPDVNLSWEQRFRIIKGVASGLLYLHEGYEQVVIHRDVKASNVLLDGEMNGKLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGKATTSSDVYAFGALLLEVACGRRPIDPKSSSEELVLVDWVWENYREGKLLEVMDPKLKGDFNVAEAVMILKLGLFCSNDSAAARPTMRQVVRFLEGEIGVPEEISAPKVVEGGRNGEGFDDFVNSFASSSFNKGNFYR 657
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 34927983 34930317 - CmPI595203_10g028470.1 Cmu10g2847 428377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2847 657 Gene3D Transferase(Phosphotransferase) domain 1 420 628 - -
Cmu10g2847 657 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
Cmu10g2847 657 Gene3D - 22 263 - -
Cmu10g2847 657 FunFam L-type lectin-domain containing receptor kinase S.4 20 268 - -
Cmu10g2847 657 CDD STKc_IRAK 349 615 - -
Cmu10g2847 657 CDD lectin_legume_LecRK_Arcelin_ConA 45 264 IPR001220 GO:0030246(InterPro)
Cmu10g2847 657 Pfam Protein kinase domain 344 551 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2847 657 SMART serkin_6 343 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2847 657 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 282 IPR013320 -
Cmu10g2847 657 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2847 657 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524(InterPro)
Cmu10g2847 657 SUPERFAMILY Protein kinase-like (PK-like) 324 625 IPR011009 -
Cmu10g2847 657 FunFam L-type lectin-domain containing receptor kinase S.4 420 626 - -
Cmu10g2847 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu10g2847 657 FunFam Lectin-domain containing receptor kinase A4.3 328 419 - -
Cmu10g2847 657 Pfam Legume lectin domain 23 274 IPR001220 GO:0030246(InterPro)
Cmu10g2847 657 PANTHER - 39 620 IPR050528 GO:0005886(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g0840 Cmu-Chr4:22923701 Cmu10g2847 Cmu-Chr10:34927983 5.40E-216 dispersed
Cmu04g0842 Cmu-Chr4:22939649 Cmu10g2847 Cmu-Chr10:34927983 1.30E-188 dispersed
Cmu07g0331 Cmu-Chr7:3252650 Cmu10g2847 Cmu-Chr10:34927983 2.10E-125 dispersed
Cmu10g2493 Cmu-Chr10:31573921 Cmu10g2847 Cmu-Chr10:34927983 2.00E-101 dispersed
Cmu10g2847 Cmu-Chr10:34927983 Cmu10g2939 Cmu-Chr10:35695123 4.20E-152 dispersed
Cmu02g0318 Cmu-Chr2:2904599 Cmu10g2847 Cmu-Chr10:34927983 9.70E-99 transposed
Cmu06g1781 Cmu-Chr6:28834879 Cmu10g2847 Cmu-Chr10:34927983 4.10E-139 transposed
Cmu08g0613 Cmu-Chr8:18320919 Cmu10g2847 Cmu-Chr10:34927983 1.70E-95 transposed
Cmu09g1598 Cmu-Chr9:30449995 Cmu10g2847 Cmu-Chr10:34927983 9.40E-97 transposed
Cmu10g1255 Cmu-Chr10:5451848 Cmu10g2847 Cmu-Chr10:34927983 1.00E-116 transposed
Cmu10g2764 Cmu-Chr10:34247107 Cmu10g2847 Cmu-Chr10:34927983 2.60E-110 transposed
Cmu10g2847 Cmu-Chr10:34927983 Cmu04g0839 Cmu-Chr4:22918898 7.60E-31 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75878 PF00069 Pkinase 5.50E-46 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2847 - - - 0.0