Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2905 ATGGCTTCTTGTTGCTTTGCTATCCTGAATTGCTGTAAAGGAAATAGCAGTCCCGAGGAACCCGCAGAAGGAATTGCTGTTACCAACAATGTACGCCTCTTTTCTTATAATTCACTGAGGTCAGCAACTAGGAATTTTCATCCATCAACCAGAATAGGTGCTGGAGGTTATGGAGTTGTCTACAAAGGAGTTTTAAGGGATGGCACCAATGTTGCAGTCAAATCACTGTCTGCAGAATCAGCTCAGGGAACTCGTGAATTCTTAACCGAGATAAATATGATATCAAATATAAGACATCAACATCTCGTTGAACTGATTGGTTGTTGTGTAGAAGGCACACATCGAATTTTGGTGTATGAATACCTGGAAAACAACAGCCTTGCGAGTACTTTGCTTGGTACAATGAGTAAGCATGTCATTCTGGATTGGCCAAAGAGAGCTAAGATTTGTCTTGGTACAGCTTTGGGTCTTGCATACCTACATGAAGAAGCTGAATATTCTGTTGTTCATAGAGATATCAAGGCTAGCAATATACTTCTTGACAGAAACTTTGATCCTAAAATAGGAGACTTTGGGTTGGCTAAACTTTTCCCAGATAACGTTACTCATGTTAGCACTCGAGTGGCTGGAACTGTTGGATATTTGGCCCCCGAGTATGCACTTTTAGGACAGTTGACCAAGAAGGCAGATGTATACAGTTTTGGTGTGCTCATGCTGGAAATAGTTAGTGGAAGTAGCAGCAGTAAAACAGCATTTGGAGAAGAGTTGTCAATGCTCGTGGAATGGACTTGGAAACTAAGACAAGAAGGACGGCTTGTAGAACTAATCGATCCGGAACTGGTCGATTATCCGAAGGCTGAGGTGATGCGTTTCATCACAGTTGCACTCTTCTGTACCCAAGCAGCTGCAAATCAAAGGCCAACCATGAAGCAGGTTGTGGAAATGCTTTCAAGAGAGGTACACCTTAATGAAAAACTATTGACAGAGCCAGGAGTATACAAAGGACACAAAACTAGGAAGTTAAATGGTGCTGGTACAAGTTCTGAGGGGACTTCATTCTCCCATGGAGACAGAGGAAATTTTATCAAGTAG 1092 42.12 MASCCFAILNCCKGNSSPEEPAEGIAVTNNVRLFSYNSLRSATRNFHPSTRIGAGGYGVVYKGVLRDGTNVAVKSLSAESAQGTREFLTEINMISNIRHQHLVELIGCCVEGTHRILVYEYLENNSLASTLLGTMSKHVILDWPKRAKICLGTALGLAYLHEEAEYSVVHRDIKASNILLDRNFDPKIGDFGLAKLFPDNVTHVSTRVAGTVGYLAPEYALLGQLTKKADVYSFGVLMLEIVSGSSSSKTAFGEELSMLVEWTWKLRQEGRLVELIDPELVDYPKAEVMRFITVALFCTQAAANQRPTMKQVVEMLSREVHLNEKLLTEPGVYKGHKTRKLNGAGTSSEGTSFSHGDRGNFIK 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35423622 35427756 - CmPI595203_10g029050.1 Cmu10g2905 428435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2905 363 MobiDBLite consensus disorder prediction 337 363 - -
Cmu10g2905 363 SMART serkin_6 46 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2905 363 Pfam Protein tyrosine and serine/threonine kinase 50 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu10g2905 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu10g2905 363 Gene3D Phosphorylase Kinase; domain 1 18 121 - -
Cmu10g2905 363 FunFam cold-responsive protein kinase 1 17 121 - -
Cmu10g2905 363 Gene3D Transferase(Phosphotransferase) domain 1 122 329 - -
Cmu10g2905 363 FunFam Putative LRR receptor-like serine/threonine-protein kinase 122 328 - -
Cmu10g2905 363 MobiDBLite consensus disorder prediction 341 355 - -
Cmu10g2905 363 PIRSF ILK 6 326 - -
Cmu10g2905 363 CDD STKc_IRAK 52 318 - -
Cmu10g2905 363 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 27 349 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cmu10g2905 363 ProSiteProfiles Protein kinase domain profile. 46 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2905 363 SUPERFAMILY Protein kinase-like (PK-like) 25 316 IPR011009 -
Cmu10g2905 363 ProSitePatterns Protein kinases ATP-binding region signature. 52 74 IPR017441 GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1194 Cmu-Chr3:6371222 Cmu10g2905 Cmu-Chr10:35423622 1.00E-114 dispersed
Cmu07g1057 Cmu-Chr7:25472242 Cmu10g2905 Cmu-Chr10:35423622 2.40E-92 dispersed
Cmu09g0632 Cmu-Chr9:5846196 Cmu10g2905 Cmu-Chr10:35423622 1.90E-73 dispersed
Cmu10g2905 Cmu-Chr10:35423622 Cmu11g1729 Cmu-Chr11:29438639 7.90E-92 dispersed
Cmu10g2905 Cmu-Chr10:35423622 Cmu11g1728 Cmu-Chr11:29414431 1.90E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75887 PF07714 PK_Tyr_Ser-Thr 1.20E-46 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2905 - - - 0.0