Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2917 ATGGAAGGCCATAATCCTCATCCTCATCCTCATCCCCATCCCCTTATTCAGCTCCACCAGCAGCAACAAATTCAACTTCCTCCCCCACCGCCGCATCTCCACCAGAGCCTCGCCGTCTCCGCCGATCAAACCACAGCAACAGCCGCCGACAGATTCCCTCAATGGAGTATTCAAGAAACAAAGGAGTTTTTGACGATCAGAGCCGAGCTGGATCAAACCTTCATGGAAACCAAACGAAACAAGCTCTTGTGGGAAATTACTGCCTCCAAAATGAAGGAAAAGGGTTTTAATCGCAGCGCTGAACAGTGTAAATGTAAATGGAAAAACCTCGTTACTCGTTACAAGGGTTGTGAAACAATGGAGCCAGAAATTTCAAGGCAGCAATTTCCATTCTACACAGAGTTACAAGCAATATTTGGGGCAAGAATGCAAAGAATATTATGGGCAGAGGCGGAGAGCGGCGGTAGCGGGTCGAAGAAGAAGACGTTACCATTATCGTCTGACGATGACGAAGAAAACGACGATAGCGATGGCGATGGAGGCGAGGCAAAAGTTAGCAGTAGGAAGAGGAAAAAAGTTAAAGGAATGGGCGGTACGACGACGGGAGGCGGCGAGGGCAGTGGAAAGAGTAGTATCAATGATTTGAAAGAAATGTTGGAAGATTTTTTGAATCAACAAATGCAAATGGAGGTGCAATGGAGGGAGGCATTTGAGGCAAGGGAAAAAGAGAGACAAATGAGGGAAATGGAATGGAGAAGAAACATGGAAGCTTTAGAACATGAGAGGATAATGTTGGAAAGAAGATGGCGAGAAAGAGAAGAACAAAGGAGAATGAGAGAAGAAGTTAGGGCTGAGAAAAGAGATGCCTTAATCACAGCTTTGTTAAACAAGCTTAGAAGAGATGATCATATTTAA 915 45.14 MEGHNPHPHPHPHPLIQLHQQQQIQLPPPPPHLHQSLAVSADQTTATAADRFPQWSIQETKEFLTIRAELDQTFMETKRNKLLWEITASKMKEKGFNRSAEQCKCKWKNLVTRYKGCETMEPEISRQQFPFYTELQAIFGARMQRILWAEAESGGSGSKKKTLPLSSDDDEENDDSDGDGGEAKVSSRKRKKVKGMGGTTTGGGEGSGKSSINDLKEMLEDFLNQQMQMEVQWREAFEAREKERQMREMEWRRNMEALEHERIMLERRWREREEQRRMREEVRAEKRDALITALLNKLRRDDHI 304
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35546889 35547979 + CmPI595203_10g029170.1 Cmu10g2917 428447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2917 304 Gene3D - 55 116 - -
Cmu10g2917 304 MobiDBLite consensus disorder prediction 153 212 - -
Cmu10g2917 304 Pfam Myb/SANT-like DNA-binding domain 54 138 IPR044822 -
Cmu10g2917 304 Coils Coil 248 275 - -
Cmu10g2917 304 PANTHER FI21293P1 28 300 - -
Cmu10g2917 304 Coils Coil 212 232 - -
Cmu10g2917 304 FunFam Zinc finger and SCAN domain-containing 20 55 116 - -
Cmu10g2917 304 CDD GT1 53 118 - -
Cmu10g2917 304 ProSiteProfiles Myb-like domain profile. 55 111 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1117 Cmu-Chr7:26214015 Cmu10g2917 Cmu-Chr10:35546889 2.40E-24 transposed
Cmu10g2917 Cmu-Chr10:35546889 Cmu04g0746 Cmu-Chr4:21922822 5.50E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
7082 PF13837 Myb_DNA-bind_4 2.20E-18 CL0123 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2917 - - - 0.0