Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu10g2939 ATGACTATGGCAGCTCCTCTGGCTCTTCTTTCTGTGTTCCTCCTTTTGGCTGCCCATTCAGTGCAGTCTTCATTTCCCTACCATGGATTCAACGATACAAGACTTGATCTTGAGGGAGCTTTTGTTTTGAAGCCATCTGGTGCATTGAGGCTCACCAATAGATCGCATAATGTTATCGGCCACGCGTTCTATCCATCTTCATTCCAGATGTTTGATCAAAGTTCTGACTCATTTCCGAATGTTTCATCATTCAGCACAACTTTTGTTTTTGCAATTGATCCTTCGAGCCCCGGCCAAGGCGGGTACGGCTTGGCCTTTGCCATAGCTCCATCAACCCAATTTGCAGGTGCAGACAGTGGACACTTTCTTGGATTGTTCAAATCTTCCAACAATGGTAACACTTCAAACCATATATTTGCTGTTGAATTTGACACTGTAAATGGGCATGATGAAGAAAGGAACACCAAAGGAAACCATATTGGAATCAACATCAATGGCATTTCATCAGTTGCATCCAAACCTGCTTCTTATTCCGACTATGGCGAAGCTCATGAACACGACTTGCAAATGGATTCTGGTGATCCTATCATCGTTTGGATTGAATATGATGGCCCCAACAGAATGGTGAACGTTACAATAGCTCCGTGGAAGCTTAAAAGAAAACCAACAAAGTCACTCCTTTCCCGTCGGATTGAACTGAAACCTGTTCTAAAGGAAAAAATGTTCGTCGGCTTCTCGGCTTCAACCGGAGATAAAACAAGCTCTCATTACATTTTGGGATGGAGTTTTGCAATGAATGGACCAGCGCCTCCCCTGAATTACTCTCTTCTTCCCAACCCACCAAAAGAGCAAGATTCTCTTTCTTCACCACCCAACTCCCACTTCAAGGTTTTTATAGCAGTTATATCTGTTGTAGCCATTCTAGGAATTCTTTTCTTAGCTTTCTGGTACAGAAAAACGTGGCAAACTGAGAGGCTTGAAGATTGGGAAAGAGACTGTCCTCACAGATTCCACTACAGAGACCTTTACACAGCAACAAAAGGATTTAAAAGTAGCGAGCTAATTGGAATTGGGGGATTTGGCTCAGTGTATAAAGGTCAGATACATTCAACTGGAATTGAAATTGCAGTGAAGAGAGTAAGAAGAAACTCAGGCCAAGGAATGAAAGAATTCGCAGCAGAAATCGAAAGCTTAGGTCGATTAAGACACAAGAACTTGGTGAATCTTCAAGGTTGGTGCAAGAAAAAGAACGATCTACTCATAGTTTACGATTATATTCCAAATGGAAGCCTCTACTCTCTTCTATATCATCCAAAAAACAACTATATATTGAATTGGAAACAAAGATTCAACATCCTCAAAGGAATTGCAGCAGGACTATTATACCTTCACGAAGAATGGGAGCAAGTAGTGATCCATCGAGATGTGAAGCCAAGCAATGTTCTAATAGACGCCGACATGAATCCCCGATTGAGCGATTTCGGTCTAGCCAGGCAATACGACCACGACGAAGCATCACACACGACCGGCGTCGTCGGCACGATCGGCTACATAGCGCCGGAGTTGGTTCGTACAGGGAAGGCTTCGAAAAACACGGATGTGTTTGGGTATGGAGTTCTGCTTCTGGAAGTGGCGTGTGGAAGAAAACCTCTGGAATCGGAACAGTTCATATTGGTGGATTGGGTGATGGAGCAGTATGAAAGCGGAAAAATTCTTAATGCGGCTGATCCGAAGTTGAATTCAGTTTATGAGGATGAGGAGATGGAGATGGTTCTGCAATTGGGGCTTCTTTGTACTCACCAGATAGCCGAAGCTCGGCCGACGATGAGACAGGTGACGAGAATCCTTCACGGCGACGATCAAATTCCGGCGGTGGACGGCTGGGCTTGTTCTAAAAGCTACTCGAAATTTAACTCGAGAATGACTGAAGTGATTTCAGCAACTTCTTACCGTTCGTCGTCCATTGGCGATATTTCTTCAAGTTCCATAGATGCAGGCCGATAA 2004 43.96 MTMAAPLALLSVFLLLAAHSVQSSFPYHGFNDTRLDLEGAFVLKPSGALRLTNRSHNVIGHAFYPSSFQMFDQSSDSFPNVSSFSTTFVFAIDPSSPGQGGYGLAFAIAPSTQFAGADSGHFLGLFKSSNNGNTSNHIFAVEFDTVNGHDEERNTKGNHIGININGISSVASKPASYSDYGEAHEHDLQMDSGDPIIVWIEYDGPNRMVNVTIAPWKLKRKPTKSLLSRRIELKPVLKEKMFVGFSASTGDKTSSHYILGWSFAMNGPAPPLNYSLLPNPPKEQDSLSSPPNSHFKVFIAVISVVAILGILFLAFWYRKTWQTERLEDWERDCPHRFHYRDLYTATKGFKSSELIGIGGFGSVYKGQIHSTGIEIAVKRVRRNSGQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGSLYSLLYHPKNNYILNWKQRFNILKGIAAGLLYLHEEWEQVVIHRDVKPSNVLIDADMNPRLSDFGLARQYDHDEASHTTGVVGTIGYIAPELVRTGKASKNTDVFGYGVLLLEVACGRKPLESEQFILVDWVMEQYESGKILNAADPKLNSVYEDEEMEMVLQLGLLCTHQIAEARPTMRQVTRILHGDDQIPAVDGWACSKSYSKFNSRMTEVISATSYRSSSIGDISSSSIDAGR 667
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35695123 35697126 - CmPI595203_10g029390.1 Cmu10g2939 428469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu10g2939 667 Pfam Legume lectin domain 23 275 IPR001220 GO:0030246(InterPro)
Cmu10g2939 667 FunFam L-type lectin-domain containing receptor kinase S.4 426 628 - -
Cmu10g2939 667 CDD STKc_IRAK 355 616 - -
Cmu10g2939 667 CDD lectin_legume_LecRK_Arcelin_ConA 24 267 IPR001220 GO:0030246(InterPro)
Cmu10g2939 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 282 IPR013320 -
Cmu10g2939 667 FunFam L-type lectin-domain containing receptor kinase V.9 21 271 - -
Cmu10g2939 667 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524(InterPro)
Cmu10g2939 667 Gene3D - 21 269 - -
Cmu10g2939 667 PANTHER - 30 623 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Cmu10g2939 667 Pfam Protein kinase domain 350 613 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2939 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu10g2939 667 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2939 667 FunFam serine/threonine-protein kinase PBS1-like 316 425 - -
Cmu10g2939 667 Gene3D Phosphorylase Kinase; domain 1 334 425 - -
Cmu10g2939 667 Gene3D Transferase(Phosphotransferase) domain 1 426 635 - -
Cmu10g2939 667 SMART serkin_6 349 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu10g2939 667 SUPERFAMILY Protein kinase-like (PK-like) 333 621 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g2764 Cmu-Chr10:34247107 Cmu10g2939 Cmu-Chr10:35695123 2.10E-96 dispersed
Cmu10g2847 Cmu-Chr10:34927983 Cmu10g2939 Cmu-Chr10:35695123 4.20E-152 dispersed
Cmu10g2939 Cmu-Chr10:35695123 Cmu07g1225 Cmu-Chr7:27553333 8.90E-65 dispersed
Cmu10g2939 Cmu-Chr10:35695123 Cmu10g2940 Cmu-Chr10:35699994 2.40E-240 tandem
Cmu08g0128 Cmu-Chr8:2483955 Cmu10g2939 Cmu-Chr10:35695123 2.90E-257 transposed
Cmu10g2939 Cmu-Chr10:35695123 Cmu11g0627 Cmu-Chr11:6859067 2.30E-38 wgd
Cmu10g2939 Cmu-Chr10:35695123 Cmu07g0490 Cmu-Chr7:5639333 6.20E-29 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75889 PF00069 Pkinase 4.10E-51 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu10g2939 - - - 0.0