Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0057 ATGGGTTGCATTTGCTCGAAGGGAATTCCAGCTAACGACTATGTTGCTGAGAATCATTCCAAAGAGAGGCATTTGAAGTCTAATAGATCTTCCAGACATGGGGCTTCATTGAGGAAAGAAGAATCCGTGTTACATTCTGATGGAGGGCAAAGTGATGCAATGGCGCGATTGATATTGAACCAACATGGGGAAGAGAATGCTGGATCAACATCTGAATCGGATGATGCTGAGAAGGCAACACCCATTGGAAAAGCTGCCAGTGCCAAGCCACTGCGTCAAGAACAACGGCCAAGTATGGAGGATGGAGAAAAGAGAGTAGGAGTACATAACAATAATAATAATGCAACACCTAGAATAATCGGTGTTGTAATTGGGGAAAAGGGTGCTTTGGTTATTGCTGGATGGCCTTCTTGGCTGACATCTGTGGCTGGAGAAGCAATCAATGGATGGGTTCCTAGAAAGGCAGACTCTTTTCAGAAGTTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCGTGATATTGAAACAAACAAGATTGTTGCATTGAAGAAGGTGCGATTTGCTAACATGGATCCTGAAAGTGTTCGTTTTATGGCCAGGGAAATTCTTATCCTACGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATCACTTCAAGGGTATCGGGCAGTTTATACCTCATATTTGAGTATATGGAACATGATCTTGCAGGGTTGGTAGCAACCCCAGGGATCAAGTTCACTGAAGCACAGATAAAATGCTATATGAAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCGCAGGGAGTTTTGCACCGTGACATCAAGGGCTCAAATCTTCTGATTGACAATAATGGTAATCTAAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCGTTCCCGGCAAAAGCAGCCTCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCACCTGAGCTTTTGCTTGGTGCAACGGACTATGGAGTTTCTGTAGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAACTGTATGCTGGAAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACACAAGATCTTCAAACTCTGTGGCTCCCCGTCTGAAGAATACTGGAAAAAGTCAAAATTACCGCATGCCACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTTCCTTTCTCTGCATTGGCCCTTTTGGATGTCCTTCTCGCGGTGGAACCTGATGGCCGTGGAACAGCATCCTCTGCCCTTCAAAGTGAGTTCTTTACCACTGAACCGCTTCCCTCGGATCCCTCTGCTTTGCCAAAGTACCCACCTTGTAAGGAGTTTGATGTAAAGCTTCGAGATGAGGAATCTCGAAGAAGAAGAGCTCCTATCTGCATTGCACATGAACATGAAGCAGGTCGTAAATTTTCCCGAGAATCAAAAGCAATTCCTGCACCAGATGCGAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGGGCAGCAGAATCCTACAAGTGTCAGTGAAAAGTATAATCATGAAGAGGACGGTGGCTCTGGCTTTTGCATCGGCCCCCCAAGAGAAGCAACGCAAATGCAGCCAACTGCATTGGGTTCTTCACGATACATGAACGGGAGTCAGGGTGATAATCTAAGAGGTTCTTCAGTTGGGGCAAAAGGTGCAGAACTTAGAAAACAGAGATCTTTTATGCAGCATGGTGCTGGACAATTATCTCGGTATTCCAATTCTGTTGCAGTTCGAGGTGGTTCACGATTTGGCTGTGGTGGAGAGAGTAGTGCTAATTCACACTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGCGACTCTTCAGAAAAGCATGAATGGTCTCACCATTTACTAGACAGGCCAAAATCTTCATATAAGATAGATGATGATCAATCAGCTGGAAAAGAGTCTACTATGAGTTATGCTCCGAAGAAGAGAATTCACTACTCAGGACCATTGATGCCTCCCGGGGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTGCGCAAGGCTCGTATTGACAAAGCTAAGACAAAAAAGACGTACGACGACAAAGGTCAGATGGAATCATTGCTTCACCATGCGAGAAATGGCAATTGA 2211 44.91 MGCICSKGIPANDYVAENHSKERHLKSNRSSRHGASLRKEESVLHSDGGQSDAMARLILNQHGEENAGSTSESDDAEKATPIGKAASAKPLRQEQRPSMEDGEKRVGVHNNNNNATPRIIGVVIGEKGALVIAGWPSWLTSVAGEAINGWVPRKADSFQKLDKIGQGTYSSVYRARDIETNKIVALKKVRFANMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLVATPGIKFTEAQIKCYMKQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPFSALALLDVLLAVEPDGRGTASSALQSEFFTTEPLPSDPSALPKYPPCKEFDVKLRDEESRRRRAPICIAHEHEAGRKFSRESKAIPAPDANAELQASIQKKQGQQNPTSVSEKYNHEEDGGSGFCIGPPREATQMQPTALGSSRYMNGSQGDNLRGSSVGAKGAELRKQRSFMQHGAGQLSRYSNSVAVRGGSRFGCGGESSANSHWPEECFNVSYNHFNGGDSSEKHEWSHHLLDRPKSSYKIDDDQSAGKESTMSYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTKKTYDDKGQMESLLHHARNGN 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1061686 1073017 + CmPI595203_11g000570.1 Cmu11g0057 428579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0057 736 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Cmu11g0057 736 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524(InterPro)
Cmu11g0057 736 MobiDBLite consensus disorder prediction 706 736 - -
Cmu11g0057 736 MobiDBLite consensus disorder prediction 510 524 - -
Cmu11g0057 736 Gene3D Transferase(Phosphotransferase) domain 1 241 480 - -
Cmu11g0057 736 PANTHER CELL DIVISION PROTEIN KINASE 157 442 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cmu11g0057 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g0057 736 Coils Coil 687 707 - -
Cmu11g0057 736 Pfam Protein kinase domain 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g0057 736 MobiDBLite consensus disorder prediction 18 112 - -
Cmu11g0057 736 ProSiteProfiles Protein kinase domain profile. 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g0057 736 FunFam probable serine/threonine-protein kinase At1g54610 145 240 - -
Cmu11g0057 736 FunFam probable serine/threonine-protein kinase At1g54610 241 481 - -
Cmu11g0057 736 SMART serkin_6 158 442 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g0057 736 MobiDBLite consensus disorder prediction 510 542 - -
Cmu11g0057 736 SUPERFAMILY Protein kinase-like (PK-like) 152 449 IPR011009 -
Cmu11g0057 736 MobiDBLite consensus disorder prediction 706 728 - -
Cmu11g0057 736 CDD STKc_CDK9_like 158 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu04g0346 Cmu-Chr4:10044343 Cmu11g0057 Cmu-Chr11:1061686 2.60E-47 dispersed
Cmu05g1044 Cmu-Chr5:9626629 Cmu11g0057 Cmu-Chr11:1061686 9.70E-195 dispersed
Cmu08g0078 Cmu-Chr8:1573914 Cmu11g0057 Cmu-Chr11:1061686 7.00E-192 dispersed
Cmu08g0305 Cmu-Chr8:7601633 Cmu11g0057 Cmu-Chr11:1061686 3.70E-118 dispersed
Cmu10g2170 Cmu-Chr10:27745529 Cmu11g0057 Cmu-Chr11:1061686 7.80E-96 dispersed
Cmu11g0057 Cmu-Chr11:1061686 Cmu11g0462 Cmu-Chr11:5123432 8.60E-146 dispersed
Cmu11g0057 Cmu-Chr11:1061686 Cmu03g2235 Cmu-Chr3:30980116 6.80E-167 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75898 PF00069 Pkinase 3.30E-68 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0057 - - - 0.0