Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g0057 | ATGGGTTGCATTTGCTCGAAGGGAATTCCAGCTAACGACTATGTTGCTGAGAATCATTCCAAAGAGAGGCATTTGAAGTCTAATAGATCTTCCAGACATGGGGCTTCATTGAGGAAAGAAGAATCCGTGTTACATTCTGATGGAGGGCAAAGTGATGCAATGGCGCGATTGATATTGAACCAACATGGGGAAGAGAATGCTGGATCAACATCTGAATCGGATGATGCTGAGAAGGCAACACCCATTGGAAAAGCTGCCAGTGCCAAGCCACTGCGTCAAGAACAACGGCCAAGTATGGAGGATGGAGAAAAGAGAGTAGGAGTACATAACAATAATAATAATGCAACACCTAGAATAATCGGTGTTGTAATTGGGGAAAAGGGTGCTTTGGTTATTGCTGGATGGCCTTCTTGGCTGACATCTGTGGCTGGAGAAGCAATCAATGGATGGGTTCCTAGAAAGGCAGACTCTTTTCAGAAGTTGGATAAGATTGGACAAGGAACGTACAGCAGTGTGTACAGGGCCCGTGATATTGAAACAAACAAGATTGTTGCATTGAAGAAGGTGCGATTTGCTAACATGGATCCTGAAAGTGTTCGTTTTATGGCCAGGGAAATTCTTATCCTACGTAGGCTTGACCACCCCAATGTCATGAAGCTTGAAGGTCTTATCACTTCAAGGGTATCGGGCAGTTTATACCTCATATTTGAGTATATGGAACATGATCTTGCAGGGTTGGTAGCAACCCCAGGGATCAAGTTCACTGAAGCACAGATAAAATGCTATATGAAACAGCTGCTTTGTGGCCTTGAACATTGCCATGCGCAGGGAGTTTTGCACCGTGACATCAAGGGCTCAAATCTTCTGATTGACAATAATGGTAATCTAAAGATAGGTGATTTTGGGCTATCAACCTTTTTCCGTTCCCGGCAAAAGCAGCCTCTTACAAGTCGTGTGGTAACTTTGTGGTATCGGCCACCTGAGCTTTTGCTTGGTGCAACGGACTATGGAGTTTCTGTAGATTTGTGGAGTGCTGGTTGCATTCTTGCAGAACTGTATGCTGGAAAGCCTATCATGCCTGGAAGAACAGAGGTGGAGCAACTACACAAGATCTTCAAACTCTGTGGCTCCCCGTCTGAAGAATACTGGAAAAAGTCAAAATTACCGCATGCCACCATCTTTAAACCTCAACATCCTTACAAGCGGTGTGTTGCTGAGACATTCAAAGACTTTCCTTTCTCTGCATTGGCCCTTTTGGATGTCCTTCTCGCGGTGGAACCTGATGGCCGTGGAACAGCATCCTCTGCCCTTCAAAGTGAGTTCTTTACCACTGAACCGCTTCCCTCGGATCCCTCTGCTTTGCCAAAGTACCCACCTTGTAAGGAGTTTGATGTAAAGCTTCGAGATGAGGAATCTCGAAGAAGAAGAGCTCCTATCTGCATTGCACATGAACATGAAGCAGGTCGTAAATTTTCCCGAGAATCAAAAGCAATTCCTGCACCAGATGCGAATGCTGAATTGCAGGCATCCATACAGAAGAAACAAGGGCAGCAGAATCCTACAAGTGTCAGTGAAAAGTATAATCATGAAGAGGACGGTGGCTCTGGCTTTTGCATCGGCCCCCCAAGAGAAGCAACGCAAATGCAGCCAACTGCATTGGGTTCTTCACGATACATGAACGGGAGTCAGGGTGATAATCTAAGAGGTTCTTCAGTTGGGGCAAAAGGTGCAGAACTTAGAAAACAGAGATCTTTTATGCAGCATGGTGCTGGACAATTATCTCGGTATTCCAATTCTGTTGCAGTTCGAGGTGGTTCACGATTTGGCTGTGGTGGAGAGAGTAGTGCTAATTCACACTGGCCAGAAGAGTGTTTTAATGTGTCATATAACCATTTCAATGGTGGCGACTCTTCAGAAAAGCATGAATGGTCTCACCATTTACTAGACAGGCCAAAATCTTCATATAAGATAGATGATGATCAATCAGCTGGAAAAGAGTCTACTATGAGTTATGCTCCGAAGAAGAGAATTCACTACTCAGGACCATTGATGCCTCCCGGGGGAAACCTTGAGGAAATGTTAAAAGAGCACGAGAAACAAATCCAGCATGCAGTGCGCAAGGCTCGTATTGACAAAGCTAAGACAAAAAAGACGTACGACGACAAAGGTCAGATGGAATCATTGCTTCACCATGCGAGAAATGGCAATTGA | 2211 | 44.91 | MGCICSKGIPANDYVAENHSKERHLKSNRSSRHGASLRKEESVLHSDGGQSDAMARLILNQHGEENAGSTSESDDAEKATPIGKAASAKPLRQEQRPSMEDGEKRVGVHNNNNNATPRIIGVVIGEKGALVIAGWPSWLTSVAGEAINGWVPRKADSFQKLDKIGQGTYSSVYRARDIETNKIVALKKVRFANMDPESVRFMAREILILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLAGLVATPGIKFTEAQIKCYMKQLLCGLEHCHAQGVLHRDIKGSNLLIDNNGNLKIGDFGLSTFFRSRQKQPLTSRVVTLWYRPPELLLGATDYGVSVDLWSAGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQHPYKRCVAETFKDFPFSALALLDVLLAVEPDGRGTASSALQSEFFTTEPLPSDPSALPKYPPCKEFDVKLRDEESRRRRAPICIAHEHEAGRKFSRESKAIPAPDANAELQASIQKKQGQQNPTSVSEKYNHEEDGGSGFCIGPPREATQMQPTALGSSRYMNGSQGDNLRGSSVGAKGAELRKQRSFMQHGAGQLSRYSNSVAVRGGSRFGCGGESSANSHWPEECFNVSYNHFNGGDSSEKHEWSHHLLDRPKSSYKIDDDQSAGKESTMSYAPKKRIHYSGPLMPPGGNLEEMLKEHEKQIQHAVRKARIDKAKTKKTYDDKGQMESLLHHARNGN | 736 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1061686 | 1073017 | + | CmPI595203_11g000570.1 | Cmu11g0057 | 428579 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g0057 | 736 | Gene3D | Phosphorylase Kinase; domain 1 | 145 | 240 | - | - | |
Cmu11g0057 | 736 | ProSitePatterns | Protein kinases ATP-binding region signature. | 164 | 187 | IPR017441 | GO:0005524(InterPro) | |
Cmu11g0057 | 736 | MobiDBLite | consensus disorder prediction | 706 | 736 | - | - | |
Cmu11g0057 | 736 | MobiDBLite | consensus disorder prediction | 510 | 524 | - | - | |
Cmu11g0057 | 736 | Gene3D | Transferase(Phosphotransferase) domain 1 | 241 | 480 | - | - | |
Cmu11g0057 | 736 | PANTHER | CELL DIVISION PROTEIN KINASE | 157 | 442 | IPR050108 | GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER) | |
Cmu11g0057 | 736 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 278 | 290 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu11g0057 | 736 | Coils | Coil | 687 | 707 | - | - | |
Cmu11g0057 | 736 | Pfam | Protein kinase domain | 158 | 442 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu11g0057 | 736 | MobiDBLite | consensus disorder prediction | 18 | 112 | - | - | |
Cmu11g0057 | 736 | ProSiteProfiles | Protein kinase domain profile. | 158 | 442 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu11g0057 | 736 | FunFam | probable serine/threonine-protein kinase At1g54610 | 145 | 240 | - | - | |
Cmu11g0057 | 736 | FunFam | probable serine/threonine-protein kinase At1g54610 | 241 | 481 | - | - | |
Cmu11g0057 | 736 | SMART | serkin_6 | 158 | 442 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu11g0057 | 736 | MobiDBLite | consensus disorder prediction | 510 | 542 | - | - | |
Cmu11g0057 | 736 | SUPERFAMILY | Protein kinase-like (PK-like) | 152 | 449 | IPR011009 | - | |
Cmu11g0057 | 736 | MobiDBLite | consensus disorder prediction | 706 | 728 | - | - | |
Cmu11g0057 | 736 | CDD | STKc_CDK9_like | 158 | 442 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu04g0346 | Cmu-Chr4:10044343 | Cmu11g0057 | Cmu-Chr11:1061686 | 2.60E-47 | dispersed | |
Cmu05g1044 | Cmu-Chr5:9626629 | Cmu11g0057 | Cmu-Chr11:1061686 | 9.70E-195 | dispersed | |
Cmu08g0078 | Cmu-Chr8:1573914 | Cmu11g0057 | Cmu-Chr11:1061686 | 7.00E-192 | dispersed | |
Cmu08g0305 | Cmu-Chr8:7601633 | Cmu11g0057 | Cmu-Chr11:1061686 | 3.70E-118 | dispersed | |
Cmu10g2170 | Cmu-Chr10:27745529 | Cmu11g0057 | Cmu-Chr11:1061686 | 7.80E-96 | dispersed | |
Cmu11g0057 | Cmu-Chr11:1061686 | Cmu11g0462 | Cmu-Chr11:5123432 | 8.60E-146 | dispersed | |
Cmu11g0057 | Cmu-Chr11:1061686 | Cmu03g2235 | Cmu-Chr3:30980116 | 6.80E-167 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75898 | PF00069 | Pkinase | 3.30E-68 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g0057 | - | - | - | 0.0 |