Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0062 ATGACAATGCCACAAGTAGTTGTTGTCCTGTTGACGTTTTTATTTTTGGGTTTAGCATCCAATGCTCAACTTTCCTCCACATTTTACGACCAAACTTGTCCCACTGCACTCACCACGATTAGAACGGTTATTAGGCAAGCAATTTCTCGAGAACGTCGAATGGCTGCATCTCTCATTCGCCTCCATTTTCACGATTGCTTCGTTCAGGGTTGTGATGCGTCAATATTGCTTGACGATACTCCTTCTATGATTGGTGAACAAAATGCAGCACCCAATAGAAACTCTGCTAGAGGTTACAGGGTGATTCATAAGGCTAAGACTGAAGTTGAGAAGAAATGTCCCGGTGTTGTATCTTGTGCCGATATTCTTGCTGTGGCCGCAAGGGATGCTTCTTTTGCTGTTGGTGGTCCATCTTGGAAAGTAAAACTTGGAAGAAGAGACTCTACTACTGCAAGCAAAACTCTAGCAGAGAACGAGCTTCCACATTTCCAAGCAGGTCTTGAAAGGCTTATTTCTATTTTTGCAAATAAAGGTCTTAGTACTAGAGACATGGTTGCACTATCCGGTTCTCATACTATAGGACAAGCCCAATGCTTCCTTTTCCGCAATAGGATATACAACCAAAGTAATATTGACACAGGGTTTGCCAAGACTCGTCGCAGAAATTGTCCAACATCAGGGAGAAATGGCAATTTGGCACCCCTTGATTTGGTCACACCGAATTCCTTTGATAACAACTACTTCAAAAATCTTATTCAAAGAAAGGGCTTGCTAGAAACTGATCAAGTTCTTTTTAATGGAGGATCGACGGATAACATTGTTAGAGAGTATAGTAGAGATCCAACTATATTCAAATCTGACTTTGCAACTGCAATGGTGAAGATGGGAGACATCCAACCTCTAACGGGCTTAGAAGGACAAATAAGAAATATATGTGGTGCTGTAAACTAA 951 41.43 MTMPQVVVVLLTFLFLGLASNAQLSSTFYDQTCPTALTTIRTVIRQAISRERRMAASLIRLHFHDCFVQGCDASILLDDTPSMIGEQNAAPNRNSARGYRVIHKAKTEVEKKCPGVVSCADILAVAARDASFAVGGPSWKVKLGRRDSTTASKTLAENELPHFQAGLERLISIFANKGLSTRDMVALSGSHTIGQAQCFLFRNRIYNQSNIDTGFAKTRRRNCPTSGRNGNLAPLDLVTPNSFDNNYFKNLIQRKGLLETDQVLFNGGSTDNIVREYSRDPTIFKSDFATAMVKMGDIQPLTGLEGQIRNICGAVN 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1114034 1115172 - CmPI595203_11g000620.1 Cmu11g0062 428584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0062 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Cmu11g0062 316 Gene3D - 27 312 - -
Cmu11g0062 316 FunFam Peroxidase 27 169 - -
Cmu11g0062 316 Pfam Peroxidase 40 280 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 ProSitePatterns Peroxidases active site signature. 55 66 IPR019794 GO:0004601(InterPro)
Cmu11g0062 316 FunFam Peroxidase 161 295 - -
Cmu11g0062 316 PRINTS Plant peroxidase signature 290 303 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Plant peroxidase signature 234 249 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Plant peroxidase signature 250 267 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 ProSiteProfiles Plant heme peroxidase family profile. 23 316 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PANTHER PEROXIDASE 72-RELATED 12 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 Gene3D Peroxidase, domain 2 161 295 - -
Cmu11g0062 316 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Haem peroxidase superfamily signature 236 251 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0062 316 CDD secretory_peroxidase 23 315 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu11g0062 Cmu-Chr11:1114034 Cmu11g0089 Cmu-Chr11:1429584 8.50E-159 dispersed
Cmu11g0062 Cmu-Chr11:1114034 Cmu11g0585 Cmu-Chr11:6426450 1.30E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0062 K00430 - csv:116403992 560.451