Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0079 ATGTCCATTTCAATCAAAGGATTCAAAGTGAAATGGTGGTCATTCGAGTACTTCAAGAGACAAATACATAATGTTGTTGTTGATTTAGAAGTCTCCCGACCTGTTGACTATGGTAATGATTTTAGAGATTTCAAAAATCAATTTCCCAAGGGATATATTAATGTTGAGATGGATGAGCTAGCCATAGACAACCAGGCAATTTATAAGTCGATGACACATAAATCAATGACAGATGACATTGTGATGATACATGAGATGATGACACAAGAGCTAGAGATAAATGAGCCATCGATGACTCAGAATTTGATGGCACACAAGCAACCAACTTATGATAATGATATGACACTTGAGCTGGTGAGCGTGAAGTCAAAGTTGGCCTTAATGAAGTCAGACCTCACGAGCATAAAGTTAGAGTTGGCCACTGTCATGTTAAAGTTGAAGAGTATAACGTCAGTGTTACATTTGTTCTATAAGGAAAAGGTAGTCGAGGTGGAACAAGTGGTTCAACAGAACGCTATTGAAGACCCATCGACCATAAAGAAAAAGGGCATGGATGTTGATGAGCGATCTGCCCTAGCCTTTGTAAAACGCAAGCTTCCTGTAATCTCTCTATCTCTCTCTTTCACGACGGTGATCTCTCTCTCACATTCATCACTCGCCGCCGCCGGCAGCTTCTCTCTCTCTGACGCCACCGCCGCCGGTAATCTCTCTCCCTTTCTCTCACTCATCTCTCAATCGCTCTCTCAACGCAGAGAAATTCAGATTGAGCATCAGCAGATGCTTCTGTTTAGACCGTTTGCTGATTTTGTTACCTTGGTTGGTGGCAGTGCAGACAAGATGTCTCGGAAGGGTTTGATGGAACAAGACTTAAAGAAATTGGATGTGACAAAGCTCCATCCGCTCTCGCCAGAGGTTATATCTCGTCAAGCTACCATTAATATTGGTACTATTGGTCATGTGGCACATGGGAAGTCTACCGTTGTAAAAGCAATTTCAGGAGTCCAGACTGTACGTTTCAAGAATGAGCTGGAGCGTAACATTACTATTAAGCTGGGGTATGCTAATGCAAAGATATACAAATGTGAAGATGACAAGTGCCCTCGGCCTATGTGCTACAAGGCATATGGAAGTGGAAAGGAAGACAGTCCTTTATGTGATGTGCTTGGGTTTGAAAATTGCAGGATGAAACTATTGCGACATGTATCCTTTGTCGACTGCCCAGGTCACGATATTCTCATGGCTACCATGCTTAACGGAGCAGCCATTATGGATGGAGCATTACTTCTGATAGCTGCCAATGAAAGCTGCCCTCAACCTCAAACTTCTGAGCACCTTGCTGCTGTTGAAATTATGCGCCTTCAGCATATTATAATCCTCCAGAATAAAGTTGATCTTATTCAGGAAAATGTAGCAATCAATCAGCACGAAGCTATTCAAAAGTTCATTCAGGGAACTGTTGCCGATGGTGCACCAGTAGTACCAATTTCTGCTCAGCTGAAGTATAACATTGATGTTGTTTGCGAGTACATAGTTAAAAAGATTCCAATTCCAGAAAGGAATTTTGTCTCGCCTCCTAATATGATCGTGATTCGTTCTTTTGACGTTAACAAACCTGGATTTGAAGTTGATGAGATCAAAGGTGGTGTGGCTGGTGGTAGCATACTACGGGGTGTTTTAAAGGTGAATCAATTTATTGAAGTTCGCCCGGGTATTGTTGTTAAGGATGAAAGTGGTAACATCAAGTGCACCCCAATATACTCTAGGATTGTTTCTTTGTATGCGGAGCAAAATGAGCTGCAATTTGCAGTCCCTGGAGGTCTCATTGGGGTTGGCACGACCATGGATCCCACTTTGACTCGTGCTGACAGATTGGTCGGTCAGGTTCTTGGGGAAGTTGGATCACTTCCTGATGTTTTTGTTGAGCTAGAGGTAAACTTTTTCCTTTTGCGGCGGCTCCTAGGTGTGAGGACAAAAGGATCAGAAAGGCAGGGAAAAGTATCGAAACTGGCCAAGGGGGAGATTTTAATGTTGAACATAGGATCCATGTCTACGGGAGCTAGAGTACTTGCAGTGAAGAACGATTTAGCAAAGTTGCAGCTTACATCTCCTGTTTGCACCAGCAAAGGGGAGAAGATTGCTCTAAGTCGTCGAGTCGAGAAGCACTGGCGTCTTATTGGCTGGGGTCAAATTCAAGCTGGAACGACTCTCGATGTCCCTCCCTGCCCCATTTGA 2232 43.41 MSISIKGFKVKWWSFEYFKRQIHNVVVDLEVSRPVDYGNDFRDFKNQFPKGYINVEMDELAIDNQAIYKSMTHKSMTDDIVMIHEMMTQELEINEPSMTQNLMAHKQPTYDNDMTLELVSVKSKLALMKSDLTSIKLELATVMLKLKSITSVLHLFYKEKVVEVEQVVQQNAIEDPSTIKKKGMDVDERSALAFVKRKLPVISLSLSFTTVISLSHSSLAAAGSFSLSDATAAGNLSPFLSLISQSLSQRREIQIEHQQMLLFRPFADFVTLVGGSADKMSRKGLMEQDLKKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDKCPRPMCYKAYGSGKEDSPLCDVLGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFVSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKGEILMLNIGSMSTGARVLAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTLDVPPCPI 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1356245 1364724 - CmPI595203_11g000790.1 Cmu11g0079 428601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0079 743 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 283 738 IPR050543 GO:0000049(PANTHER)|GO:0001731(PANTHER)|GO:0003743(PANTHER)|GO:0005829(PANTHER)|GO:0005850(PANTHER)
Cmu11g0079 743 FunFam Eukaryotic translation initiation factor 2 subunit gamma 520 635 - -
Cmu11g0079 743 CDD eIF2_gamma 312 519 IPR044128 GO:0005525(InterPro)
Cmu11g0079 743 SUPERFAMILY Translation proteins 519 633 IPR009000 -
Cmu11g0079 743 FunFam Eukaryotic translation initiation factor 2 subunit gamma 636 735 - -
Cmu11g0079 743 Pfam Elongation factor Tu domain 2 547 629 IPR004161 GO:0005525(InterPro)
Cmu11g0079 743 PRINTS GTP-binding elongation factor signature 402 412 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu11g0079 743 PRINTS GTP-binding elongation factor signature 418 429 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu11g0079 743 PRINTS GTP-binding elongation factor signature 456 465 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu11g0079 743 PRINTS GTP-binding elongation factor signature 313 326 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu11g0079 743 CDD eIF2_gamma_II 520 633 IPR044127 GO:0000049(InterPro)
Cmu11g0079 743 Pfam Initiation factor eIF2 gamma, C terminal 641 730 IPR015256 -
Cmu11g0079 743 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 309 518 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
Cmu11g0079 743 FunFam Eukaryotic translation initiation factor 2 subunit gamma 309 519 - -
Cmu11g0079 743 Gene3D Translation factors 636 735 - -
Cmu11g0079 743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 302 521 IPR027417 -
Cmu11g0079 743 Gene3D Translation factors 521 635 - -
Cmu11g0079 743 CDD eIF2_gamma_III 636 730 IPR015256 -
Cmu11g0079 743 Gene3D - 309 519 IPR027417 -
Cmu11g0079 743 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 634 731 IPR009001 -
Cmu11g0079 743 Pfam Elongation factor Tu GTP binding domain 311 515 IPR000795 GO:0003924(InterPro)|GO:0005525(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g0640 Cmu-Chr9:5949370 Cmu11g0079 Cmu-Chr11:1356245 8.20E-14 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0079 K03242 - csv:101220434 912.909