Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g0079 | ATGTCCATTTCAATCAAAGGATTCAAAGTGAAATGGTGGTCATTCGAGTACTTCAAGAGACAAATACATAATGTTGTTGTTGATTTAGAAGTCTCCCGACCTGTTGACTATGGTAATGATTTTAGAGATTTCAAAAATCAATTTCCCAAGGGATATATTAATGTTGAGATGGATGAGCTAGCCATAGACAACCAGGCAATTTATAAGTCGATGACACATAAATCAATGACAGATGACATTGTGATGATACATGAGATGATGACACAAGAGCTAGAGATAAATGAGCCATCGATGACTCAGAATTTGATGGCACACAAGCAACCAACTTATGATAATGATATGACACTTGAGCTGGTGAGCGTGAAGTCAAAGTTGGCCTTAATGAAGTCAGACCTCACGAGCATAAAGTTAGAGTTGGCCACTGTCATGTTAAAGTTGAAGAGTATAACGTCAGTGTTACATTTGTTCTATAAGGAAAAGGTAGTCGAGGTGGAACAAGTGGTTCAACAGAACGCTATTGAAGACCCATCGACCATAAAGAAAAAGGGCATGGATGTTGATGAGCGATCTGCCCTAGCCTTTGTAAAACGCAAGCTTCCTGTAATCTCTCTATCTCTCTCTTTCACGACGGTGATCTCTCTCTCACATTCATCACTCGCCGCCGCCGGCAGCTTCTCTCTCTCTGACGCCACCGCCGCCGGTAATCTCTCTCCCTTTCTCTCACTCATCTCTCAATCGCTCTCTCAACGCAGAGAAATTCAGATTGAGCATCAGCAGATGCTTCTGTTTAGACCGTTTGCTGATTTTGTTACCTTGGTTGGTGGCAGTGCAGACAAGATGTCTCGGAAGGGTTTGATGGAACAAGACTTAAAGAAATTGGATGTGACAAAGCTCCATCCGCTCTCGCCAGAGGTTATATCTCGTCAAGCTACCATTAATATTGGTACTATTGGTCATGTGGCACATGGGAAGTCTACCGTTGTAAAAGCAATTTCAGGAGTCCAGACTGTACGTTTCAAGAATGAGCTGGAGCGTAACATTACTATTAAGCTGGGGTATGCTAATGCAAAGATATACAAATGTGAAGATGACAAGTGCCCTCGGCCTATGTGCTACAAGGCATATGGAAGTGGAAAGGAAGACAGTCCTTTATGTGATGTGCTTGGGTTTGAAAATTGCAGGATGAAACTATTGCGACATGTATCCTTTGTCGACTGCCCAGGTCACGATATTCTCATGGCTACCATGCTTAACGGAGCAGCCATTATGGATGGAGCATTACTTCTGATAGCTGCCAATGAAAGCTGCCCTCAACCTCAAACTTCTGAGCACCTTGCTGCTGTTGAAATTATGCGCCTTCAGCATATTATAATCCTCCAGAATAAAGTTGATCTTATTCAGGAAAATGTAGCAATCAATCAGCACGAAGCTATTCAAAAGTTCATTCAGGGAACTGTTGCCGATGGTGCACCAGTAGTACCAATTTCTGCTCAGCTGAAGTATAACATTGATGTTGTTTGCGAGTACATAGTTAAAAAGATTCCAATTCCAGAAAGGAATTTTGTCTCGCCTCCTAATATGATCGTGATTCGTTCTTTTGACGTTAACAAACCTGGATTTGAAGTTGATGAGATCAAAGGTGGTGTGGCTGGTGGTAGCATACTACGGGGTGTTTTAAAGGTGAATCAATTTATTGAAGTTCGCCCGGGTATTGTTGTTAAGGATGAAAGTGGTAACATCAAGTGCACCCCAATATACTCTAGGATTGTTTCTTTGTATGCGGAGCAAAATGAGCTGCAATTTGCAGTCCCTGGAGGTCTCATTGGGGTTGGCACGACCATGGATCCCACTTTGACTCGTGCTGACAGATTGGTCGGTCAGGTTCTTGGGGAAGTTGGATCACTTCCTGATGTTTTTGTTGAGCTAGAGGTAAACTTTTTCCTTTTGCGGCGGCTCCTAGGTGTGAGGACAAAAGGATCAGAAAGGCAGGGAAAAGTATCGAAACTGGCCAAGGGGGAGATTTTAATGTTGAACATAGGATCCATGTCTACGGGAGCTAGAGTACTTGCAGTGAAGAACGATTTAGCAAAGTTGCAGCTTACATCTCCTGTTTGCACCAGCAAAGGGGAGAAGATTGCTCTAAGTCGTCGAGTCGAGAAGCACTGGCGTCTTATTGGCTGGGGTCAAATTCAAGCTGGAACGACTCTCGATGTCCCTCCCTGCCCCATTTGA | 2232 | 43.41 | MSISIKGFKVKWWSFEYFKRQIHNVVVDLEVSRPVDYGNDFRDFKNQFPKGYINVEMDELAIDNQAIYKSMTHKSMTDDIVMIHEMMTQELEINEPSMTQNLMAHKQPTYDNDMTLELVSVKSKLALMKSDLTSIKLELATVMLKLKSITSVLHLFYKEKVVEVEQVVQQNAIEDPSTIKKKGMDVDERSALAFVKRKLPVISLSLSFTTVISLSHSSLAAAGSFSLSDATAAGNLSPFLSLISQSLSQRREIQIEHQQMLLFRPFADFVTLVGGSADKMSRKGLMEQDLKKLDVTKLHPLSPEVISRQATINIGTIGHVAHGKSTVVKAISGVQTVRFKNELERNITIKLGYANAKIYKCEDDKCPRPMCYKAYGSGKEDSPLCDVLGFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFVSPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIKCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPDVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKGEILMLNIGSMSTGARVLAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGTTLDVPPCPI | 743 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1356245 | 1364724 | - | CmPI595203_11g000790.1 | Cmu11g0079 | 428601 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g0079 | 743 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER | 283 | 738 | IPR050543 | GO:0000049(PANTHER)|GO:0001731(PANTHER)|GO:0003743(PANTHER)|GO:0005829(PANTHER)|GO:0005850(PANTHER) | |
Cmu11g0079 | 743 | FunFam | Eukaryotic translation initiation factor 2 subunit gamma | 520 | 635 | - | - | |
Cmu11g0079 | 743 | CDD | eIF2_gamma | 312 | 519 | IPR044128 | GO:0005525(InterPro) | |
Cmu11g0079 | 743 | SUPERFAMILY | Translation proteins | 519 | 633 | IPR009000 | - | |
Cmu11g0079 | 743 | FunFam | Eukaryotic translation initiation factor 2 subunit gamma | 636 | 735 | - | - | |
Cmu11g0079 | 743 | Pfam | Elongation factor Tu domain 2 | 547 | 629 | IPR004161 | GO:0005525(InterPro) | |
Cmu11g0079 | 743 | PRINTS | GTP-binding elongation factor signature | 402 | 412 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cmu11g0079 | 743 | PRINTS | GTP-binding elongation factor signature | 418 | 429 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cmu11g0079 | 743 | PRINTS | GTP-binding elongation factor signature | 456 | 465 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cmu11g0079 | 743 | PRINTS | GTP-binding elongation factor signature | 313 | 326 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cmu11g0079 | 743 | CDD | eIF2_gamma_II | 520 | 633 | IPR044127 | GO:0000049(InterPro) | |
Cmu11g0079 | 743 | Pfam | Initiation factor eIF2 gamma, C terminal | 641 | 730 | IPR015256 | - | |
Cmu11g0079 | 743 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 309 | 518 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) | |
Cmu11g0079 | 743 | FunFam | Eukaryotic translation initiation factor 2 subunit gamma | 309 | 519 | - | - | |
Cmu11g0079 | 743 | Gene3D | Translation factors | 636 | 735 | - | - | |
Cmu11g0079 | 743 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 302 | 521 | IPR027417 | - | |
Cmu11g0079 | 743 | Gene3D | Translation factors | 521 | 635 | - | - | |
Cmu11g0079 | 743 | CDD | eIF2_gamma_III | 636 | 730 | IPR015256 | - | |
Cmu11g0079 | 743 | Gene3D | - | 309 | 519 | IPR027417 | - | |
Cmu11g0079 | 743 | SUPERFAMILY | EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain | 634 | 731 | IPR009001 | - | |
Cmu11g0079 | 743 | Pfam | Elongation factor Tu GTP binding domain | 311 | 515 | IPR000795 | GO:0003924(InterPro)|GO:0005525(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu09g0640 | Cmu-Chr9:5949370 | Cmu11g0079 | Cmu-Chr11:1356245 | 8.20E-14 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g0079 | K03242 | - | csv:101220434 | 912.909 |