Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0090 ATGGCAATGACTCGAGTAATTCTCATTGCTACGTTGTCATTGTTGCTTTTCGGTATAGTTTGTGATGCTCAACTTTCTTCTACATTTTACGATCAAACTTGTCCTACTGCACTCAATACTATTAGAACTGTTGTTAGGCAAGCAGTTTCTCAAGAGCGTCGAATGGCTGCATCTCTCATTCGCCTCCATTTTCATGATTGCTTTGTTCAAGGTTGTGATGCATCGATATTGCTTGATGATACTCATTCCATGATTGGTGAACAAAATGCAGCTCCAAACAGAAACTCTGCAAGAGGTTATGGAGTGATACACAAGGCTAAGACGGAAGTTGAGAAGATATGTCCTGGTGTTGTATCTTGTGCAGATATTCTTACTGTGGCTGCAAGAGATGCATCTTTTGCTGTCGGAGGTCCATCTTGGACAGTGAAACTTGGAAGACGAGATTCTACCACCGCAAGTAAAACTCTAGCAGAAAGTGAGCTACCAGGCTTCCAAGAAAGCCTCGACAAACTTATATCCATTTTTGAGAACAAAGGTCTTAGTGCTAGAGACATGGTTGCACTTTCAGGTTCTCACACCATAGGACAAGCCCAATGCTTTCTTTTCCGCAATAGGATATACAACCAAAGTAATATTGACACAGGATTTGCTAGTACTCGTCGTAGAAATTGTCCTACAACTGGTGGTAATGGAAATTTGGCACCACTTGATTTGGTTACACCTAACTCCTTTGACAATAACTACTTCAAAAATCTTGTGCAAAAGAAGGGATTGCTTGAAACAGATCAAGTTCTCTTTAATGGAGGATCAACAGATAGTATTGTCACAGAGTATAGTAGGAATCCCACGACATTCAAATCAGATTTTGCAACTGCAATGATAAAAATGGGAGACATTCAACCTCTCATTGGAGTAGAAGGACAAATAAGAAAGATATGTGGTGCAGTGAACTAA 954 40.15 MAMTRVILIATLSLLLFGIVCDAQLSSTFYDQTCPTALNTIRTVVRQAVSQERRMAASLIRLHFHDCFVQGCDASILLDDTHSMIGEQNAAPNRNSARGYGVIHKAKTEVEKICPGVVSCADILTVAARDASFAVGGPSWTVKLGRRDSTTASKTLAESELPGFQESLDKLISIFENKGLSARDMVALSGSHTIGQAQCFLFRNRIYNQSNIDTGFASTRRRNCPTTGGNGNLAPLDLVTPNSFDNNYFKNLVQKKGLLETDQVLFNGGSTDSIVTEYSRNPTTFKSDFATAMIKMGDIQPLIGVEGQIRKICGAVN 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1434628 1435774 - CmPI595203_11g000900.1 Cmu11g0090 428612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0090 317 ProSiteProfiles Plant heme peroxidase family profile. 24 317 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 FunFam Peroxidase 162 296 - -
Cmu11g0090 317 CDD secretory_peroxidase 24 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu11g0090 317 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 FunFam Peroxidase 28 178 - -
Cmu11g0090 317 SUPERFAMILY Heme-dependent peroxidases 24 317 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 Gene3D - 28 313 - -
Cmu11g0090 317 Gene3D Peroxidase, domain 2 162 296 - -
Cmu11g0090 317 Pfam Peroxidase 41 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0090 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cmu11g0090 317 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cmu11g0090 317 PANTHER PEROXIDASE 72-RELATED 13 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu11g0090 Cmu-Chr11:1434628 Cmu11g0585 Cmu-Chr11:6426450 1.70E-106 dispersed
Cmu11g0089 Cmu-Chr11:1429584 Cmu11g0090 Cmu-Chr11:1434628 3.20E-158 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0090 K00430 - csv:116403994 550.436