Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g0091 | ATGGGTCTCTTCTTCTTCCTCTCTACAATGCCCATTTCAAGGCTTTGCCTATTTCTCGCCTTCTTTCCGCTGTTTCTTTCACCCCTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGATGACCGGAGCTTCCTCCTCCTCCGCCACCACCGCCACCTCCTCCACCAACCCTTTTTCCCATGGACTTCCTTACCTCCATCTCAAGCTCCATCTTCTCTTTCTCCCTTGCCTCAACCACAGCACCAACAGCCTAAACTCCCCTTTTCTTCTACTTCATTTTCCTCGCCCCCTAAACCCTTTTTTCCATCCTACCCTTCGTCGCCGCCGCCGCCTCCGTCCCCTCCTTTGACGGCGCTCCCTACATTTCCGGCCAACATTTCTGCTCTTCTCTTTCCGCAACCTACTTCTTCTTCCCAACACCTCCACCGCCATGTCTTTGCCATTGTCATCTCTGTTTCTCTTGTCTTCTCTGTTCTTGTTTTTCTCGTTGCTCTGTACTTATACTTTCGAAAGCGGAACCGACAAATCTCTGCTACCGATAAGGCCTCGAGAACTGATAATCTCCGGCTGTATCCGCCGGATATTGACACTTCTGATGGAGTTCACAAACACAGAACCTCCTCCACCACCAGCTCCAAATTTCTTTATCTTGGGACTTTGGCTACTTCTCGAGAGATTGATGAGGAGGCCGCCGGAAATGTGGAGGACGGTGGCGGCGGGATCGTGGAGTCTGTTTCTCCGGTGAAAATGGGGTCGCCGGAGCTGAAGCCCCTTCCACCGCTTCCTCGCCGGAATTTCGCCGAAGATTATCAGAGGAATGTTGATAGTAATGACAACGATGATGACGAAGAAGATCGCGACGATGAAGAGTTCTTTTCGCCAAGAGGGTCTTCTGTCGGCGGGAAGGATAATGTGGGGAGTAATAGAAGATTGAGCCCTGTGAAGTTGTTTCATAATGTGGAAACTGAAAATTTCTTGAGGAAAAGCTATAATTCTAGTTTGAATTCTGGTTCTCCCTCTGTTTCTGTTCCCAATAGTCCTTCTCCGCCATTGATGTTGAGCCCCACGAGTTTGAGATCGAAGTCGCCTGACTCCATTATCAGATTCCCTGTTCCTTTACGGCCACTGCCAACACTTCCGGTACCGCCATCACCGTCGTTGTCCTCTGCTTCTTCACCAATGGGAGGTTCAGGGAACACCAAGAACTCGCCGTCGAGAGATTCCGATTTGTCAGAGCTGCATCGGCAGTGTTCAAATGGTTTTAGGATGGATTACCAGCAACCATTACCGGTAAAACTACCACCACCCCGGCCACCACCACCGCCACCACCTCCTCCAATGTTTTGGGAGATTCCTCAATCTTCCTCTCTTCTCAACAAGGAACCAAATCTAGGTCCACCGGTACTCACCGTGCCATCGAGACCGATACTCTCACAGAACATAGCTCATATGTCAGCAGGGGAGCAATCAAACACCATTGGAGATGCCGAGAGAATGGAAGAAAATTCGAAGCCGAAACTGAAGGCCTTGCATTGGGACAAAGTTCGGACGAGCTCCGATCGAGCCATGGTGTGGGATCAGATCAAGTCGAGTTCTTTTCAGTTGAATGAGGAAATGATTGAATCACTTTTTATGGTGAATAACAATAATTCAAGTCTGATGAGCAAGGAAAATGGTAGTGTTCGTCAAAACATGCCTTTAGGGAGCCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATTGAAGAAGTCTCAGAGGCCCTTTTGGAAGGAAATTCAGATACTTTGTGCACTGAACTGCTAGAAAGTTTACTAAAAATGGCGCCGACCGAAGAAGAAGAACGTAATTTGAAAGAATACAAAGATGATTCACCTTTTAAACTTGGGCCAGCTGAGAAATTCCTCAAGGTAGTTCTCGATGTACCATTTGCATTCAAAAGGGTGGATGCAATGCTTTACATTGCTAATTTCGAATCTGAGGTTGAGTACCTCAATCGGTCCTTCGAAACTCTTGAGGCTGCTTGTATAGAATTGAAGAACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACCGGGAACCGGATGAATGTAGGCACGAACCGAGGCGATGCACATGCTTTTAAACTCGACACCCTTCTGAAGCTTGTCGATATCAAGGGCACTGATGGAAAGACCACTCTCTTGCATTTCGTAGTGCAGGAGATTATTAGAGCTGAAGGTTATCGACACTCCACCTCTGACCTCAACCTGACAGCTGATAAAACTCAACAATCTTCCTTAACAAATGACGTCGAGTTTCGGAAGCTTGGTCTTCAAGTTGTTTCAGGTCTTAGTAGGGAGCTATCCAATGTGAAGAAAGCTGCATTAATGGATGCAGATGTGCTTAGCAACGATGTAGGGAAACTCGCTGGAGGGATCACAAAAATCACTGAGGTCATTAGATTAAATGAAGACATGTCGAAAGGAGGGAGTAAGTCAAATTTCTCGGACTCCATGAACAGGTTCTTGGGGAGGGCAGCTGAAGAAGTAGCAAGGGTACAAGTCAAAGAGGGCATTATCCTCTCCATGGTAAAGGAAATAACCGAATACTTTCATGGAAACTTAGCGAAAGAAGAAGCTCGGCCGCTGCGTATATTCATGGTGGTAAAGGATTTTCTTGCAATCTTAGATCAGGTATGCAAAGAAGTTGGAAGAATCAATGAAAGAACAATAGTTGGTTCGGCTCGTCAATTTACGGGCCCTCCAAATCCATGTCTTCCATCGATTTTCCCTGGATTATGCGAAACCACCTCCTACCCACCAGCCATTTCACTCCGCCTCGACGCACCTCGCCCGCCGTTCCTGCCCGCCACCGACTTAACGTTGCCGCCGTACACTGCACTCTTAGCTGCTCCAGTCTCAGCCTTCCGACGAAATTGCCGCCGCCACCTTCCTCTCACACTCTCTCACCTCTCCAAGCAATCAGCCTTGCATATCTCTGTTTTGTTTATCAGAAACACTGTGCTTCAGCCCCTAACCGGCGCCGTTGGTGAGATGGTGCCGCTGCCCCTCATTTCTCAGATCCCCAAGTTCAATCAAGTTTCTAGATTTTGTGTGGCCATGAAGAAGCAGGAAGAAACCGTTGTAGCTTCAAGTGATCGCTACGAGATGAGGATTCCGCATGTGTTGAGTGTTGCTGGTTCTGATTCAGGAGCAGGGGCTGGAATCCAAGCGGATCTTAAGACTTGTGCTGCTCGTGGAGTGTACTGCTCCACTGTGATAACTGCTATTACTGCACAGAACACTGTAGGGGTTCAGGATGTGAACATTGTGCCGGAGGGTTTTGTTTCAGAGCAGCTGAAATCTGTTCTCTCTGATATGCAAGTGGATGTGGTGAAAACCGGAATGCTACCTTCTACCCGCATTGTTCAGGTTCTACATCAGCGCCTGAAGGAGTTTCCCGTTCAAGCCTTGGTGGTTGATCCTGTCATGGTGTCTACCAGTGGAGATGTACTAGCTGGTCCTACCATTGTCTCAGTGTTACAGGAAGAGCTTCTACCAATGGCTGACTTGGTAACTCCAAATTTGAAGGAAGCATCTGCCTTACTTGGTGGTATGCCACTTAAAACAATTTCTGACATGCGTCATGCTGCAACATTAATCCATCAGATGGGATCAAAGAATGTACTTGTCAAAGGTGGGGACCTTCCCGATTCATTGGATGCCGTCGATATATTCTTTGATGGCAAGGATTTGCATGAGCTACGTTCTTCGCGCATAAAGACATGCAACACTCATGGTACTGGATGCAGCTTAGCATCATGCATCGCAGCTGAACTTGCTAAAGGGTCTTCAATGTTCTCAGCTGTTAAGGCAAGCAAACAGTTCATTGAAAGAGCATTGAAGTACAGTAAGGACATCAGCATTGGAAATGGACCTCAAGGCCCATTTGATCATCTATGTCGTCTCAAGAGTCAAGAACATAGTTCCTACAGACAGGGGTATTTCAATCCAGCTGACTTATTCTTGTATGCTGTTACGGACTCAGGTATGAATAAGCGTTGGGACCGTTCTATTACCGATGCTGTTAAAGCTGCAGTGGAAGGAGGTGCTACTATTGTTCAAATAAGGGAAAAGGATGCTAAAACTCGTGATTTCTTGGAAGCAGCAAAGGCATGTATGAAGATTTGTCACGCACATGGAGTTCCATTGTTGATCAACGATCGCATTGACATCGCACTTGCGTGTGATGCTGATGGTGTACACGTTGGTCAGTCCGATATTCCTGCTCATGAAGTTCGCAGTCTTCTGGGCCCTAATAAGATCATCGGTGTCTCGTGCAAGACACCGGAGCAAGCAGAACAGGCATGGCTTGATGGTGCAGATTACATTGGGTGCGGTGGAGTTTATCCCACAAACACAAAAGCAAACAATCTGACTGTTGGGATTGATGGATTGAAAAGAGTTTGCTTAGCTTCCAAGTTACCTGTGGTTGCAATTGGTGGTATTAATCAAAGTAATGCAGCAGCTGTGATGGAAATTGGTGTCCCAAATCTTAAAGGTGTTGCAGTTGTGTCAGCTCTTTTTGATAGGCAATGTGTTTTAGAGGAGGCCTTAAAGTTACATGCAACTTTGGTGGAGGCTACAACAACAAATATATGA | 4686 | 47.01 | MGLFFFLSTMPISRLCLFLAFFPLFLSPLSAAAAAAAADDRSFLLLRHHRHLLHQPFFPWTSLPPSQAPSSLSPLPQPQHQQPKLPFSSTSFSSPPKPFFPSYPSSPPPPPSPPLTALPTFPANISALLFPQPTSSSQHLHRHVFAIVISVSLVFSVLVFLVALYLYFRKRNRQISATDKASRTDNLRLYPPDIDTSDGVHKHRTSSTTSSKFLYLGTLATSREIDEEAAGNVEDGGGGIVESVSPVKMGSPELKPLPPLPRRNFAEDYQRNVDSNDNDDDEEDRDDEEFFSPRGSSVGGKDNVGSNRRLSPVKLFHNVETENFLRKSYNSSLNSGSPSVSVPNSPSPPLMLSPTSLRSKSPDSIIRFPVPLRPLPTLPVPPSPSLSSASSPMGGSGNTKNSPSRDSDLSELHRQCSNGFRMDYQQPLPVKLPPPRPPPPPPPPPMFWEIPQSSSLLNKEPNLGPPVLTVPSRPILSQNIAHMSAGEQSNTIGDAERMEENSKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMVNNNNSSLMSKENGSVRQNMPLGSQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLCTELLESLLKMAPTEEEERNLKEYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAMLYIANFESEVEYLNRSFETLEAACIELKNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDLNLTADKTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLSNDVGKLAGGITKITEVIRLNEDMSKGGSKSNFSDSMNRFLGRAAEEVARVQVKEGIILSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLAILDQVCKEVGRINERTIVGSARQFTGPPNPCLPSIFPGLCETTSYPPAISLRLDAPRPPFLPATDLTLPPYTALLAAPVSAFRRNCRRHLPLTLSHLSKQSALHISVLFIRNTVLQPLTGAVGEMVPLPLISQIPKFNQVSRFCVAMKKQEETVVASSDRYEMRIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAITAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSTRIVQVLHQRLKEFPVQALVVDPVMVSTSGDVLAGPTIVSVLQEELLPMADLVTPNLKEASALLGGMPLKTISDMRHAATLIHQMGSKNVLVKGGDLPDSLDAVDIFFDGKDLHELRSSRIKTCNTHGTGCSLASCIAAELAKGSSMFSAVKASKQFIERALKYSKDISIGNGPQGPFDHLCRLKSQEHSSYRQGYFNPADLFLYAVTDSGMNKRWDRSITDAVKAAVEGGATIVQIREKDAKTRDFLEAAKACMKICHAHGVPLLINDRIDIALACDADGVHVGQSDIPAHEVRSLLGPNKIIGVSCKTPEQAEQAWLDGADYIGCGGVYPTNTKANNLTVGIDGLKRVCLASKLPVVAIGGINQSNAAAVMEIGVPNLKGVAVVSALFDRQCVLEEALKLHATLVEATTTNI | 1561 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 1440399 | 1454165 | - | CmPI595203_11g000910.1 | Cmu11g0091 | 428613 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g0091 | 1561 | ProSiteProfiles | Formin homology-2 (FH2) domain profile. | 496 | 930 | IPR015425 | - | |
Cmu11g0091 | 1561 | MobiDBLite | consensus disorder prediction | 387 | 405 | - | - | |
Cmu11g0091 | 1561 | NCBIfam | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | 1070 | 1327 | IPR004399 | GO:0008972(InterPro)|GO:0009228(InterPro) | |
Cmu11g0091 | 1561 | CDD | HMPP_kinase | 1069 | 1312 | IPR004399 | GO:0008972(InterPro)|GO:0009228(InterPro) | |
Cmu11g0091 | 1561 | Gene3D | Aldolase class I | 1344 | 1556 | IPR013785 | - | |
Cmu11g0091 | 1561 | MobiDBLite | consensus disorder prediction | 68 | 96 | - | - | |
Cmu11g0091 | 1561 | MobiDBLite | consensus disorder prediction | 274 | 288 | - | - | |
Cmu11g0091 | 1561 | MobiDBLite | consensus disorder prediction | 97 | 116 | - | - | |
Cmu11g0091 | 1561 | MobiDBLite | consensus disorder prediction | 68 | 116 | - | - | |
Cmu11g0091 | 1561 | MobiDBLite | consensus disorder prediction | 428 | 448 | - | - | |
Cmu11g0091 | 1561 | Gene3D | - | 1048 | 1343 | IPR029056 | - | |
Cmu11g0091 | 1561 | SUPERFAMILY | Ribokinase-like | 1065 | 1324 | IPR029056 | - | |
Cmu11g0091 | 1561 | Pfam | Formin Homology 2 Domain | 499 | 904 | IPR015425 | - | |
Cmu11g0091 | 1561 | Gene3D | Formin, FH2 domain | 495 | 914 | IPR042201 | - | |
Cmu11g0091 | 1561 | Coils | Coil | 666 | 686 | - | - | |
Cmu11g0091 | 1561 | CDD | TMP_TenI | 1351 | 1551 | IPR022998 | - | |
Cmu11g0091 | 1561 | SMART | it6_source | 496 | 919 | IPR015425 | - | |
Cmu11g0091 | 1561 | Hamap | Thiamine-phosphate synthase [thiE]. | 1348 | 1555 | IPR034291 | GO:0004789(InterPro)|GO:0009228(InterPro) | |
Cmu11g0091 | 1561 | Pfam | Thiamine monophosphate synthase | 1351 | 1536 | IPR022998 | - | |
Cmu11g0091 | 1561 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 433 | 917 | - | - | |
Cmu11g0091 | 1561 | FunFam | Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic | 1053 | 1342 | - | - | |
Cmu11g0091 | 1561 | MobiDBLite | consensus disorder prediction | 424 | 448 | - | - | |
Cmu11g0091 | 1561 | SUPERFAMILY | Thiamin phosphate synthase | 1346 | 1549 | IPR036206 | - | |
Cmu11g0091 | 1561 | FunFam | Thiamine biosynthetic bifunctional enzyme | 1343 | 1554 | - | - | |
Cmu11g0091 | 1561 | NCBIfam | thiamine phosphate synthase | 1351 | 1540 | IPR034291 | GO:0004789(InterPro)|GO:0009228(InterPro) | |
Cmu11g0091 | 1561 | Pfam | Phosphomethylpyrimidine kinase | 1077 | 1321 | IPR013749 | - | |
Cmu11g0091 | 1561 | MobiDBLite | consensus disorder prediction | 330 | 361 | - | - | |
Cmu11g0091 | 1561 | MobiDBLite | consensus disorder prediction | 377 | 410 | - | - | |
Cmu11g0091 | 1561 | PANTHER | FORMIN-RELATED | 25 | 941 | IPR027643 | GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro) | |
Cmu11g0091 | 1561 | MobiDBLite | consensus disorder prediction | 228 | 309 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu03g2293 | Cmu-Chr3:31608164 | Cmu11g0091 | Cmu-Chr11:1440399 | 1.80E-105 | dispersed | |
Cmu07g0289 | Cmu-Chr7:2906779 | Cmu11g0091 | Cmu-Chr11:1440399 | 1.80E-163 | dispersed | |
Cmu08g0830 | Cmu-Chr8:20609521 | Cmu11g0091 | Cmu-Chr11:1440399 | 1.10E-68 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g0091 | K14153 | - | csv:101213912 | 1362.05 |