Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0091 ATGGGTCTCTTCTTCTTCCTCTCTACAATGCCCATTTCAAGGCTTTGCCTATTTCTCGCCTTCTTTCCGCTGTTTCTTTCACCCCTTTCCGCCGCCGCCGCCGCCGCCGCCGCCGATGACCGGAGCTTCCTCCTCCTCCGCCACCACCGCCACCTCCTCCACCAACCCTTTTTCCCATGGACTTCCTTACCTCCATCTCAAGCTCCATCTTCTCTTTCTCCCTTGCCTCAACCACAGCACCAACAGCCTAAACTCCCCTTTTCTTCTACTTCATTTTCCTCGCCCCCTAAACCCTTTTTTCCATCCTACCCTTCGTCGCCGCCGCCGCCTCCGTCCCCTCCTTTGACGGCGCTCCCTACATTTCCGGCCAACATTTCTGCTCTTCTCTTTCCGCAACCTACTTCTTCTTCCCAACACCTCCACCGCCATGTCTTTGCCATTGTCATCTCTGTTTCTCTTGTCTTCTCTGTTCTTGTTTTTCTCGTTGCTCTGTACTTATACTTTCGAAAGCGGAACCGACAAATCTCTGCTACCGATAAGGCCTCGAGAACTGATAATCTCCGGCTGTATCCGCCGGATATTGACACTTCTGATGGAGTTCACAAACACAGAACCTCCTCCACCACCAGCTCCAAATTTCTTTATCTTGGGACTTTGGCTACTTCTCGAGAGATTGATGAGGAGGCCGCCGGAAATGTGGAGGACGGTGGCGGCGGGATCGTGGAGTCTGTTTCTCCGGTGAAAATGGGGTCGCCGGAGCTGAAGCCCCTTCCACCGCTTCCTCGCCGGAATTTCGCCGAAGATTATCAGAGGAATGTTGATAGTAATGACAACGATGATGACGAAGAAGATCGCGACGATGAAGAGTTCTTTTCGCCAAGAGGGTCTTCTGTCGGCGGGAAGGATAATGTGGGGAGTAATAGAAGATTGAGCCCTGTGAAGTTGTTTCATAATGTGGAAACTGAAAATTTCTTGAGGAAAAGCTATAATTCTAGTTTGAATTCTGGTTCTCCCTCTGTTTCTGTTCCCAATAGTCCTTCTCCGCCATTGATGTTGAGCCCCACGAGTTTGAGATCGAAGTCGCCTGACTCCATTATCAGATTCCCTGTTCCTTTACGGCCACTGCCAACACTTCCGGTACCGCCATCACCGTCGTTGTCCTCTGCTTCTTCACCAATGGGAGGTTCAGGGAACACCAAGAACTCGCCGTCGAGAGATTCCGATTTGTCAGAGCTGCATCGGCAGTGTTCAAATGGTTTTAGGATGGATTACCAGCAACCATTACCGGTAAAACTACCACCACCCCGGCCACCACCACCGCCACCACCTCCTCCAATGTTTTGGGAGATTCCTCAATCTTCCTCTCTTCTCAACAAGGAACCAAATCTAGGTCCACCGGTACTCACCGTGCCATCGAGACCGATACTCTCACAGAACATAGCTCATATGTCAGCAGGGGAGCAATCAAACACCATTGGAGATGCCGAGAGAATGGAAGAAAATTCGAAGCCGAAACTGAAGGCCTTGCATTGGGACAAAGTTCGGACGAGCTCCGATCGAGCCATGGTGTGGGATCAGATCAAGTCGAGTTCTTTTCAGTTGAATGAGGAAATGATTGAATCACTTTTTATGGTGAATAACAATAATTCAAGTCTGATGAGCAAGGAAAATGGTAGTGTTCGTCAAAACATGCCTTTAGGGAGCCAAGAGAATCGAGTTCTTGATCCTAAGAAGTCTCAGAATATTGCAATTTTGTTGAGGGCACTTAATGTTACCATTGAAGAAGTCTCAGAGGCCCTTTTGGAAGGAAATTCAGATACTTTGTGCACTGAACTGCTAGAAAGTTTACTAAAAATGGCGCCGACCGAAGAAGAAGAACGTAATTTGAAAGAATACAAAGATGATTCACCTTTTAAACTTGGGCCAGCTGAGAAATTCCTCAAGGTAGTTCTCGATGTACCATTTGCATTCAAAAGGGTGGATGCAATGCTTTACATTGCTAATTTCGAATCTGAGGTTGAGTACCTCAATCGGTCCTTCGAAACTCTTGAGGCTGCTTGTATAGAATTGAAGAACAGCAGAATGTTTCTCAAACTTCTTGAAGCAGTGCTCAAAACCGGGAACCGGATGAATGTAGGCACGAACCGAGGCGATGCACATGCTTTTAAACTCGACACCCTTCTGAAGCTTGTCGATATCAAGGGCACTGATGGAAAGACCACTCTCTTGCATTTCGTAGTGCAGGAGATTATTAGAGCTGAAGGTTATCGACACTCCACCTCTGACCTCAACCTGACAGCTGATAAAACTCAACAATCTTCCTTAACAAATGACGTCGAGTTTCGGAAGCTTGGTCTTCAAGTTGTTTCAGGTCTTAGTAGGGAGCTATCCAATGTGAAGAAAGCTGCATTAATGGATGCAGATGTGCTTAGCAACGATGTAGGGAAACTCGCTGGAGGGATCACAAAAATCACTGAGGTCATTAGATTAAATGAAGACATGTCGAAAGGAGGGAGTAAGTCAAATTTCTCGGACTCCATGAACAGGTTCTTGGGGAGGGCAGCTGAAGAAGTAGCAAGGGTACAAGTCAAAGAGGGCATTATCCTCTCCATGGTAAAGGAAATAACCGAATACTTTCATGGAAACTTAGCGAAAGAAGAAGCTCGGCCGCTGCGTATATTCATGGTGGTAAAGGATTTTCTTGCAATCTTAGATCAGGTATGCAAAGAAGTTGGAAGAATCAATGAAAGAACAATAGTTGGTTCGGCTCGTCAATTTACGGGCCCTCCAAATCCATGTCTTCCATCGATTTTCCCTGGATTATGCGAAACCACCTCCTACCCACCAGCCATTTCACTCCGCCTCGACGCACCTCGCCCGCCGTTCCTGCCCGCCACCGACTTAACGTTGCCGCCGTACACTGCACTCTTAGCTGCTCCAGTCTCAGCCTTCCGACGAAATTGCCGCCGCCACCTTCCTCTCACACTCTCTCACCTCTCCAAGCAATCAGCCTTGCATATCTCTGTTTTGTTTATCAGAAACACTGTGCTTCAGCCCCTAACCGGCGCCGTTGGTGAGATGGTGCCGCTGCCCCTCATTTCTCAGATCCCCAAGTTCAATCAAGTTTCTAGATTTTGTGTGGCCATGAAGAAGCAGGAAGAAACCGTTGTAGCTTCAAGTGATCGCTACGAGATGAGGATTCCGCATGTGTTGAGTGTTGCTGGTTCTGATTCAGGAGCAGGGGCTGGAATCCAAGCGGATCTTAAGACTTGTGCTGCTCGTGGAGTGTACTGCTCCACTGTGATAACTGCTATTACTGCACAGAACACTGTAGGGGTTCAGGATGTGAACATTGTGCCGGAGGGTTTTGTTTCAGAGCAGCTGAAATCTGTTCTCTCTGATATGCAAGTGGATGTGGTGAAAACCGGAATGCTACCTTCTACCCGCATTGTTCAGGTTCTACATCAGCGCCTGAAGGAGTTTCCCGTTCAAGCCTTGGTGGTTGATCCTGTCATGGTGTCTACCAGTGGAGATGTACTAGCTGGTCCTACCATTGTCTCAGTGTTACAGGAAGAGCTTCTACCAATGGCTGACTTGGTAACTCCAAATTTGAAGGAAGCATCTGCCTTACTTGGTGGTATGCCACTTAAAACAATTTCTGACATGCGTCATGCTGCAACATTAATCCATCAGATGGGATCAAAGAATGTACTTGTCAAAGGTGGGGACCTTCCCGATTCATTGGATGCCGTCGATATATTCTTTGATGGCAAGGATTTGCATGAGCTACGTTCTTCGCGCATAAAGACATGCAACACTCATGGTACTGGATGCAGCTTAGCATCATGCATCGCAGCTGAACTTGCTAAAGGGTCTTCAATGTTCTCAGCTGTTAAGGCAAGCAAACAGTTCATTGAAAGAGCATTGAAGTACAGTAAGGACATCAGCATTGGAAATGGACCTCAAGGCCCATTTGATCATCTATGTCGTCTCAAGAGTCAAGAACATAGTTCCTACAGACAGGGGTATTTCAATCCAGCTGACTTATTCTTGTATGCTGTTACGGACTCAGGTATGAATAAGCGTTGGGACCGTTCTATTACCGATGCTGTTAAAGCTGCAGTGGAAGGAGGTGCTACTATTGTTCAAATAAGGGAAAAGGATGCTAAAACTCGTGATTTCTTGGAAGCAGCAAAGGCATGTATGAAGATTTGTCACGCACATGGAGTTCCATTGTTGATCAACGATCGCATTGACATCGCACTTGCGTGTGATGCTGATGGTGTACACGTTGGTCAGTCCGATATTCCTGCTCATGAAGTTCGCAGTCTTCTGGGCCCTAATAAGATCATCGGTGTCTCGTGCAAGACACCGGAGCAAGCAGAACAGGCATGGCTTGATGGTGCAGATTACATTGGGTGCGGTGGAGTTTATCCCACAAACACAAAAGCAAACAATCTGACTGTTGGGATTGATGGATTGAAAAGAGTTTGCTTAGCTTCCAAGTTACCTGTGGTTGCAATTGGTGGTATTAATCAAAGTAATGCAGCAGCTGTGATGGAAATTGGTGTCCCAAATCTTAAAGGTGTTGCAGTTGTGTCAGCTCTTTTTGATAGGCAATGTGTTTTAGAGGAGGCCTTAAAGTTACATGCAACTTTGGTGGAGGCTACAACAACAAATATATGA 4686 47.01 MGLFFFLSTMPISRLCLFLAFFPLFLSPLSAAAAAAAADDRSFLLLRHHRHLLHQPFFPWTSLPPSQAPSSLSPLPQPQHQQPKLPFSSTSFSSPPKPFFPSYPSSPPPPPSPPLTALPTFPANISALLFPQPTSSSQHLHRHVFAIVISVSLVFSVLVFLVALYLYFRKRNRQISATDKASRTDNLRLYPPDIDTSDGVHKHRTSSTTSSKFLYLGTLATSREIDEEAAGNVEDGGGGIVESVSPVKMGSPELKPLPPLPRRNFAEDYQRNVDSNDNDDDEEDRDDEEFFSPRGSSVGGKDNVGSNRRLSPVKLFHNVETENFLRKSYNSSLNSGSPSVSVPNSPSPPLMLSPTSLRSKSPDSIIRFPVPLRPLPTLPVPPSPSLSSASSPMGGSGNTKNSPSRDSDLSELHRQCSNGFRMDYQQPLPVKLPPPRPPPPPPPPPMFWEIPQSSSLLNKEPNLGPPVLTVPSRPILSQNIAHMSAGEQSNTIGDAERMEENSKPKLKALHWDKVRTSSDRAMVWDQIKSSSFQLNEEMIESLFMVNNNNSSLMSKENGSVRQNMPLGSQENRVLDPKKSQNIAILLRALNVTIEEVSEALLEGNSDTLCTELLESLLKMAPTEEEERNLKEYKDDSPFKLGPAEKFLKVVLDVPFAFKRVDAMLYIANFESEVEYLNRSFETLEAACIELKNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRAEGYRHSTSDLNLTADKTQQSSLTNDVEFRKLGLQVVSGLSRELSNVKKAALMDADVLSNDVGKLAGGITKITEVIRLNEDMSKGGSKSNFSDSMNRFLGRAAEEVARVQVKEGIILSMVKEITEYFHGNLAKEEARPLRIFMVVKDFLAILDQVCKEVGRINERTIVGSARQFTGPPNPCLPSIFPGLCETTSYPPAISLRLDAPRPPFLPATDLTLPPYTALLAAPVSAFRRNCRRHLPLTLSHLSKQSALHISVLFIRNTVLQPLTGAVGEMVPLPLISQIPKFNQVSRFCVAMKKQEETVVASSDRYEMRIPHVLSVAGSDSGAGAGIQADLKTCAARGVYCSTVITAITAQNTVGVQDVNIVPEGFVSEQLKSVLSDMQVDVVKTGMLPSTRIVQVLHQRLKEFPVQALVVDPVMVSTSGDVLAGPTIVSVLQEELLPMADLVTPNLKEASALLGGMPLKTISDMRHAATLIHQMGSKNVLVKGGDLPDSLDAVDIFFDGKDLHELRSSRIKTCNTHGTGCSLASCIAAELAKGSSMFSAVKASKQFIERALKYSKDISIGNGPQGPFDHLCRLKSQEHSSYRQGYFNPADLFLYAVTDSGMNKRWDRSITDAVKAAVEGGATIVQIREKDAKTRDFLEAAKACMKICHAHGVPLLINDRIDIALACDADGVHVGQSDIPAHEVRSLLGPNKIIGVSCKTPEQAEQAWLDGADYIGCGGVYPTNTKANNLTVGIDGLKRVCLASKLPVVAIGGINQSNAAAVMEIGVPNLKGVAVVSALFDRQCVLEEALKLHATLVEATTTNI 1561
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 1440399 1454165 - CmPI595203_11g000910.1 Cmu11g0091 428613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0091 1561 ProSiteProfiles Formin homology-2 (FH2) domain profile. 496 930 IPR015425 -
Cmu11g0091 1561 MobiDBLite consensus disorder prediction 387 405 - -
Cmu11g0091 1561 NCBIfam bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 1070 1327 IPR004399 GO:0008972(InterPro)|GO:0009228(InterPro)
Cmu11g0091 1561 CDD HMPP_kinase 1069 1312 IPR004399 GO:0008972(InterPro)|GO:0009228(InterPro)
Cmu11g0091 1561 Gene3D Aldolase class I 1344 1556 IPR013785 -
Cmu11g0091 1561 MobiDBLite consensus disorder prediction 68 96 - -
Cmu11g0091 1561 MobiDBLite consensus disorder prediction 274 288 - -
Cmu11g0091 1561 MobiDBLite consensus disorder prediction 97 116 - -
Cmu11g0091 1561 MobiDBLite consensus disorder prediction 68 116 - -
Cmu11g0091 1561 MobiDBLite consensus disorder prediction 428 448 - -
Cmu11g0091 1561 Gene3D - 1048 1343 IPR029056 -
Cmu11g0091 1561 SUPERFAMILY Ribokinase-like 1065 1324 IPR029056 -
Cmu11g0091 1561 Pfam Formin Homology 2 Domain 499 904 IPR015425 -
Cmu11g0091 1561 Gene3D Formin, FH2 domain 495 914 IPR042201 -
Cmu11g0091 1561 Coils Coil 666 686 - -
Cmu11g0091 1561 CDD TMP_TenI 1351 1551 IPR022998 -
Cmu11g0091 1561 SMART it6_source 496 919 IPR015425 -
Cmu11g0091 1561 Hamap Thiamine-phosphate synthase [thiE]. 1348 1555 IPR034291 GO:0004789(InterPro)|GO:0009228(InterPro)
Cmu11g0091 1561 Pfam Thiamine monophosphate synthase 1351 1536 IPR022998 -
Cmu11g0091 1561 SUPERFAMILY Formin homology 2 domain (FH2 domain) 433 917 - -
Cmu11g0091 1561 FunFam Thiamine biosynthetic bifunctional enzyme TH1, chloroplastic 1053 1342 - -
Cmu11g0091 1561 MobiDBLite consensus disorder prediction 424 448 - -
Cmu11g0091 1561 SUPERFAMILY Thiamin phosphate synthase 1346 1549 IPR036206 -
Cmu11g0091 1561 FunFam Thiamine biosynthetic bifunctional enzyme 1343 1554 - -
Cmu11g0091 1561 NCBIfam thiamine phosphate synthase 1351 1540 IPR034291 GO:0004789(InterPro)|GO:0009228(InterPro)
Cmu11g0091 1561 Pfam Phosphomethylpyrimidine kinase 1077 1321 IPR013749 -
Cmu11g0091 1561 MobiDBLite consensus disorder prediction 330 361 - -
Cmu11g0091 1561 MobiDBLite consensus disorder prediction 377 410 - -
Cmu11g0091 1561 PANTHER FORMIN-RELATED 25 941 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cmu11g0091 1561 MobiDBLite consensus disorder prediction 228 309 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2293 Cmu-Chr3:31608164 Cmu11g0091 Cmu-Chr11:1440399 1.80E-105 dispersed
Cmu07g0289 Cmu-Chr7:2906779 Cmu11g0091 Cmu-Chr11:1440399 1.80E-163 dispersed
Cmu08g0830 Cmu-Chr8:20609521 Cmu11g0091 Cmu-Chr11:1440399 1.10E-68 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0091 K14153 - csv:101213912 1362.05