Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g0163 | ATGACATCCGTGGCGGTTGCCGTTAACGGCGTCCGCGGCGGCAAAGGCGGCGGAGCAAGCCGCCGCGCTGTCAGATGGGCCGTCGAGAATCTCTTGCCGACCGCCGATCGCTTCATTTTGGTTCACGTTATGCCCAAAATCACCTCCATCCCCACCCCAATGGGGGATCTTGTTGCTGTCTCTGAACTTGATGCAGATGTGGTAGCTCTTTATGTTCATGATATGAAAAAGAAATATGAACAAGTTTTTGTACCTTTTAAGAAGTTATGTAGAAGAGAAAAGTTTCTTCTTCTGGTAGAAACTTTGATTTTGGAGGATGACAATCCTGCCACTGCACTTTTGAGATATGCATCTCAATCTGGGATTAAATGCTTGGTTTTGGGTTCTTGTTTTAGAACTTGCATAGCAAGGAAGATAAAAGGGGATTCAGTACCCTCTGCTATTATGAGAACTGCTAGTTCTTTTGATATTTATGTTATATATAAGAGGAGAGTTATCACACGAACCGCTAGTACTGCTCCATCTAGTGAAACTGACTCGAGGCAGTGGATGCTTGGTGACACTGATTATTACAGGGGTTTCAGTGCTGTTAGTGAAAAATTATCAGGAACTTCCTCTCCTTCTTCCTTGTCGATTGGACATCGAAGGGGTGATAGCCTCGAAGTTAACTCTACTGAGCAACTGAACTCTTTAAGCACTCTGACTGAGGAGGAAGATATGCGGGCTGAAGTTGAATCTCTGCAGCTAGAACTAGAGACCACTGTTTCCTTGTACAATCAAGCTTGTGAAGAACTAGTACATGCTCAGAAGAAGGTTCAGTCACTTACATCAGAATGCCTTGAAGAATCAAGAAAAGTGAATGCTGCTTTGGAAAGGGAACAATCTTTGAGGAAAGTTGCTGCTAAAGAGAAAGCAAAGCATTTGGAAGCCATTAAAGAGCTTGAGGAGGCTAAAGACTTGCTGGCTAAAGAAGCTTATGAGAGGCAGCTGGCTGAGCTTAATGCCATAAAGGAGTCCGTGGAGAAGCAGAAAATTCTTGATACTCTTCTGACTAATGATAGGAGGTACAGAAGATATACCACTGCCGAAATAGAAGCTGCAACAAATTTCTTCGACGAAGTTAATGTGATTGGCATCGGAGGATATGGGAAAGTCTACAAATGCAGTCTCGATCATACACCTGTAGCCATTAAGGTTTTTCAACACGACATATTCGAGAAAAAAGATGAGTTTCTGAAAGAGGTTGAAATTCTAAGTCAGATACGACATCCGCACGTGGTTTTACTGCTTGGAGCTTGTCCCGAGCGAGGTTGTTTGATCTATGAATACATGGAAAATGGAAGCTTAGATGATCATATCTTGCTCCGGAAAGGAAAAGCTCCCCTCCCTTGGTCTATTAGATTTAGAATAGTTTTTCAAGTAGCTTCTGGCCTTGCATTTTTACACAATTCAAAGCCAGAGCCTATCATTCATAGAGATCTCAAACCGGGTAATATCTTACTGGACAGAAACTTTGTAAGTAAAATCTCAGATGTTGGAATGGCTAAGATCATCGGCGATATTGTGCCGGACAATGTCACGGAGTACCGAAACACCATTCTTGCCGGTACTCTACATTACATGGATCCTGAATATCAGAGAACTGGCACACTCCGGCCAAAGTCAGATACGTACGCACTTGGGGTAACAATTCTGCAGTTGTTGACCGGGCGAGAACCACACGGTCTTCTTCTGGCTATTGAAAACTCCATCGCAAGCGCGTCCCTTGCAGATATTCTAGACAAGTCAATAACTGACTGGCCTCTGGCTGAAGCTGAAGAGTTAGCTCAACTCGCACTCAAGTGCTTGAAACTTAGATGCAGGGATAGGCCAGATCTTGAATCTGAAGTTCTTCCAGTCCTTAAAAGGCTTGTTGATTTTGCAGATTCTTGTCAAAATGAAGGCAAAAATCCTGCTAATCCCCCAAGCCACTACTTCTGCCCAATCCTACAGGAAATCATGGAGGACCCTTATATAGCAGCCGATGGCTTTACTTATGAGTATGTAGCCATTAAAGCATGGCTCGAGAAATACGACGTATCGCCGGTGACAAAGCTTAAGCTTCAGCATTCTATTTTTATTCCAAACCACACTCTGCTCTCTGCCATACTAGAGTGGAAGTCAAGAGTGACATTTCCATCTTCCTAA | 2187 | 43.48 | MTSVAVAVNGVRGGKGGGASRRAVRWAVENLLPTADRFILVHVMPKITSIPTPMGDLVAVSELDADVVALYVHDMKKKYEQVFVPFKKLCRREKFLLLVETLILEDDNPATALLRYASQSGIKCLVLGSCFRTCIARKIKGDSVPSAIMRTASSFDIYVIYKRRVITRTASTAPSSETDSRQWMLGDTDYYRGFSAVSEKLSGTSSPSSLSIGHRRGDSLEVNSTEQLNSLSTLTEEEDMRAEVESLQLELETTVSLYNQACEELVHAQKKVQSLTSECLEESRKVNAALEREQSLRKVAAKEKAKHLEAIKELEEAKDLLAKEAYERQLAELNAIKESVEKQKILDTLLTNDRRYRRYTTAEIEAATNFFDEVNVIGIGGYGKVYKCSLDHTPVAIKVFQHDIFEKKDEFLKEVEILSQIRHPHVVLLLGACPERGCLIYEYMENGSLDDHILLRKGKAPLPWSIRFRIVFQVASGLAFLHNSKPEPIIHRDLKPGNILLDRNFVSKISDVGMAKIIGDIVPDNVTEYRNTILAGTLHYMDPEYQRTGTLRPKSDTYALGVTILQLLTGREPHGLLLAIENSIASASLADILDKSITDWPLAEAEELAQLALKCLKLRCRDRPDLESEVLPVLKRLVDFADSCQNEGKNPANPPSHYFCPILQEIMEDPYIAADGFTYEYVAIKAWLEKYDVSPVTKLKLQHSIFIPNHTLLSAILEWKSRVTFPSS | 728 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 2098871 | 2102340 | - | CmPI595203_11g001630.1 | Cmu11g0163 | 428685 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g0163 | 728 | Coils | Coil | 258 | 278 | - | - | |
Cmu11g0163 | 728 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 653 | 724 | IPR013083 | - | |
Cmu11g0163 | 728 | ProSiteProfiles | Protein kinase domain profile. | 371 | 634 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu11g0163 | 728 | FunFam | Os07g0541700 protein | 444 | 534 | - | - | |
Cmu11g0163 | 728 | ProSiteProfiles | U-box domain profile. | 653 | 726 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cmu11g0163 | 728 | Gene3D | Phosphorylase Kinase; domain 1 | 350 | 443 | - | - | |
Cmu11g0163 | 728 | Gene3D | HUPs | 2 | 160 | IPR014729 | - | |
Cmu11g0163 | 728 | Pfam | Universal stress protein family | 18 | 152 | IPR006016 | - | |
Cmu11g0163 | 728 | CDD | STK_N | 3 | 162 | - | - | |
Cmu11g0163 | 728 | MobiDBLite | consensus disorder prediction | 200 | 224 | - | - | |
Cmu11g0163 | 728 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 489 | 501 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu11g0163 | 728 | CDD | RING-Ubox_WDSUB1-like | 655 | 709 | - | - | |
Cmu11g0163 | 728 | SMART | Ubox_2 | 657 | 719 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cmu11g0163 | 728 | SUPERFAMILY | Protein kinase-like (PK-like) | 354 | 627 | IPR011009 | - | |
Cmu11g0163 | 728 | ProSitePatterns | Protein kinases ATP-binding region signature. | 377 | 398 | IPR017441 | GO:0005524(InterPro) | |
Cmu11g0163 | 728 | SMART | serkin_6 | 371 | 634 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu11g0163 | 728 | Pfam | U-box domain | 655 | 720 | IPR003613 | GO:0004842(InterPro)|GO:0016567(InterPro) | |
Cmu11g0163 | 728 | Coils | Coil | 297 | 343 | - | - | |
Cmu11g0163 | 728 | Gene3D | Transferase(Phosphotransferase) domain 1 | 444 | 651 | - | - | |
Cmu11g0163 | 728 | PANTHER | OS02G0152300 PROTEIN | 4 | 716 | IPR051348 | - | |
Cmu11g0163 | 728 | Pfam | Protein kinase domain | 373 | 627 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu11g0163 | 728 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 16 | 142 | - | - | |
Cmu11g0163 | 728 | SUPERFAMILY | RING/U-box | 645 | 722 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g0448 | Cmu-Chr1:4645907 | Cmu11g0163 | Cmu-Chr11:2098871 | 1.90E-126 | dispersed | |
Cmu05g0168 | Cmu-Chr5:1461590 | Cmu11g0163 | Cmu-Chr11:2098871 | 2.70E-91 | dispersed | |
Cmu06g0363 | Cmu-Chr6:4177363 | Cmu11g0163 | Cmu-Chr11:2098871 | 2.10E-68 | dispersed | |
Cmu11g0163 | Cmu-Chr11:2098871 | Cmu11g1150 | Cmu-Chr11:21749267 | 8.90E-103 | dispersed | |
Cmu11g0163 | Cmu-Chr11:2098871 | Cmu09g0078 | Cmu-Chr9:944752 | 5.60E-113 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75903 | PF00069 | Pkinase | 1.70E-41 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g0163 | - | - | - | 0.0 |