Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0268 ATGGTGGGTTGGATTTTTTGTTGGTTTTTGTTAGTGGTGGTTCTAAGGGCGGCGGTGGTTCTGTGGTGGCGGCCGAGAAGAATCGAAGAGCATTTTTTCCGGCAAGGAATTCGTGGCCCTCCTTATCGTTTCTTCATCGGAAATGTTAAGGAACTTGTCGGAATGATGATTAAAGCTTCTTCTGATCTTTCTTTTCCTAATTCTTCTCATAATATTCTCCCTCGTGTTCTTCCTTTTTATCATCACTGGAAGAAAATTTATGGGTCAAAATTTCTAGTGTGGTTTGGGCCAACGGTGAGATTGGCAGTGTCTGATCCAGACTTGATTCGAGAAATCTTCACATCAAAATCAGAATTCTGTGAGAAAAATGAACCTCACCCACTTGTTAAACAGTTAGAAGGTGATGGTCTTCTAAGTCTCAAAGGCCAAAAATGGGCTCTTCATCGCAAGATTATCTCTCCTTCTTTCCACATGGACAATCTCAAATTGTTGATTCCAGTGATGGCAAAAAGTGTCGTGGACATGTTGGAGAAATGGTCAGCATTAATGACGTCAGCAGATTCCGGTGAGATGGAAATTGAAGTTTCCGAATGGTTCCAAACCCTAACTGAAGATGTCATCACTAGGACAGCATTTGGCTCTAGCTATGAAGATGGAAAAGCCATTTTTCGCTTACAAGCCCAACAAATGGTCCTTGCTTCTCAAGCCTTTGAAAAAGTTTTCATCCCCGGCTATAGATTCCTACCTACGAGAACAAACGTGAATTCGTGGAGACTGGATAGAGAAATAAGGAAATCGTTGATGAAATTGATCGACCGACGACGGGAGAATTCGATCGAGACGAGCTCTAAGGATTTACTAGGGTTAATGATTAGGGCATCAAAGTCTTCTCCATCATCTACAATCACTGTTAATGACATTGTTGAAGAGTGCAAAGGGTTTTTCTTTGCTGGCAAACAGACCACATCCAATTTGCTGACGTGGACAATGATCCTCATGGCAATGCACCCACAATGGCAGGTACAGGCACGTGATGAGGTACTAAGGGTGTGTGGAGCACGTGACATACCCTCCAAAGATGATGTTACAAAGCTCAAAATGTTGAGTATGATCATCAATGAATCGTTACGGTTATATCCGCCGACCGTCGCAACTATTCGACAAGCGAAAGTTGACGTGGAGCTTGGTGGTTACATGATTCCACGTGGCACTGAGCTATTGATTCCGATTTTAGCTGTTCATCATGATCAAACGATATGGGGTAATGATGTGAATGAATTCAATCCAGGGCGATTTGCTGAAGGTGTTGCAAAGGCAGCCAATCATCGAGTTGGGTTCATTCCATTCGGGTTAGGAGCTCGAACTTGCATCGGCCAAAACTTGGCTATATTGCAAGCAAAATTGGCTCTTGCACTCATACTTCAAAGATTCTCTTTTCGACTGGGACCCTCTTATCAACATTCACCAGCAGTTCAAATGCTACTTTATCCACGACATGGTGCACCTATTATTTTCCAAAAATTATCCACTCCATTAATCCATCAAGATCAACAGTCATGA 1560 42.63 MVGWIFCWFLLVVVLRAAVVLWWRPRRIEEHFFRQGIRGPPYRFFIGNVKELVGMMIKASSDLSFPNSSHNILPRVLPFYHHWKKIYGSKFLVWFGPTVRLAVSDPDLIREIFTSKSEFCEKNEPHPLVKQLEGDGLLSLKGQKWALHRKIISPSFHMDNLKLLIPVMAKSVVDMLEKWSALMTSADSGEMEIEVSEWFQTLTEDVITRTAFGSSYEDGKAIFRLQAQQMVLASQAFEKVFIPGYRFLPTRTNVNSWRLDREIRKSLMKLIDRRRENSIETSSKDLLGLMIRASKSSPSSTITVNDIVEECKGFFFAGKQTTSNLLTWTMILMAMHPQWQVQARDEVLRVCGARDIPSKDDVTKLKMLSMIINESLRLYPPTVATIRQAKVDVELGGYMIPRGTELLIPILAVHHDQTIWGNDVNEFNPGRFAEGVAKAANHRVGFIPFGLGARTCIGQNLAILQAKLALALILQRFSFRLGPSYQHSPAVQMLLYPRHGAPIIFQKLSTPLIHQDQQS 519
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 3230001 3232965 + CmPI595203_11g002680.1 Cmu11g0268 428790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0268 519 Gene3D Cytochrome P450 22 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 SUPERFAMILY Cytochrome P450 71 506 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 Pfam Cytochrome P450 80 484 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 CDD CYP734 77 502 - -
Cmu11g0268 519 PRINTS P450 superfamily signature 317 334 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 9 500 IPR050665 GO:0004497(PANTHER)|GO:0010268(PANTHER)|GO:0016131(PANTHER)
Cmu11g0268 519 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 PRINTS E-class P450 group I signature 84 103 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 PRINTS E-class P450 group I signature 326 352 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 PRINTS E-class P450 group I signature 306 323 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 PRINTS E-class P450 group I signature 202 220 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0268 519 FunFam Cytochrome P450 734A1 22 509 - -
Cmu11g0268 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1971 Cmu-Chr5:29496629 Cmu11g0268 Cmu-Chr11:3230001 2.30E-118 dispersed
Cmu05g1972 Cmu-Chr5:29503155 Cmu11g0268 Cmu-Chr11:3230001 2.10E-118 dispersed
Cmu11g0268 Cmu-Chr11:3230001 Cmu11g1704 Cmu-Chr11:29238073 3.70E-103 dispersed
Cmu03g2222 Cmu-Chr3:30818556 Cmu11g0268 Cmu-Chr11:3230001 5.50E-115 transposed
Cmu05g1838 Cmu-Chr5:28441824 Cmu11g0268 Cmu-Chr11:3230001 4.10E-25 transposed
Cmu11g1322 Cmu-Chr11:25417459 Cmu11g0268 Cmu-Chr11:3230001 5.60E-15 transposed
Cmu11g0268 Cmu-Chr11:3230001 Cmu05g0289 Cmu-Chr5:2438917 6.10E-21 wgd
Cmu11g0268 Cmu-Chr11:3230001 Cmu05g0225 Cmu-Chr5:1876953 3.80E-23 wgd
Cmu11g0268 Cmu-Chr11:3230001 Cmu06g1132 Cmu-Chr6:22051931 5.90E-226 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0268 K15639 - csv:101208789 1002.66