Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0495 CTTGATAAAGCGAAATTTTATGGCGTAGGAGCTGGTCTCTTTACAGGAATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACAAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCCCTGTCTGTTATTAAGGGCTTACTGAAGAATGACGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATAACTGGTGCAATTCCTGCCAGGATTATCTTTCTTACTGCTTTGGAGACAACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTATGGCAAATGGGTTAGCTGGCATGACTGCCTCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAGGAAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGATTCTTAGGTCAAAACTCTGCTTCTGAGAAATTTGCTCCCAGCCATACCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCTTTGGACACCATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTGATCGCTGAGGATGGATGGAAAGGTTTATATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAAGCGGTTGTGTGCAAAAGATGAACAGACTTGA 906 43.49 LDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPFKFSEPTQAAMANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWRFLGQNSASEKFAPSHTQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5359141 5363952 - CmPI595203_11g004950.1 Cmu11g0495 429017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0495 301 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 300 - -
Cmu11g0495 301 PRINTS Mitochondrial carrier protein signature 19 33 IPR002067 GO:0055085(InterPro)
Cmu11g0495 301 PRINTS Mitochondrial carrier protein signature 163 181 IPR002067 GO:0055085(InterPro)
Cmu11g0495 301 PRINTS Mitochondrial carrier protein signature 219 241 IPR002067 GO:0055085(InterPro)
Cmu11g0495 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 210 294 IPR018108 -
Cmu11g0495 301 FunFam Mitochondrial substrate carrier family protein 7 298 - -
Cmu11g0495 301 Pfam Mitochondrial carrier protein 11 85 IPR018108 -
Cmu11g0495 301 Pfam Mitochondrial carrier protein 104 191 IPR018108 -
Cmu11g0495 301 Pfam Mitochondrial carrier protein 215 297 IPR018108 -
Cmu11g0495 301 SUPERFAMILY Mitochondrial carrier 4 291 IPR023395 -
Cmu11g0495 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 190 IPR018108 -
Cmu11g0495 301 Gene3D Mitochondrial carrier domain 6 301 IPR023395 -
Cmu11g0495 301 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 87 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0749 Cmu-Chr5:6612702 Cmu11g0495 Cmu-Chr11:5359141 3.00E-82 dispersed
Cmu05g1857 Cmu-Chr5:28589918 Cmu11g0495 Cmu-Chr11:5359141 7.20E-66 dispersed
Cmu09g0166 Cmu-Chr9:1800888 Cmu11g0495 Cmu-Chr11:5359141 5.00E-12 dispersed
Cmu10g1014 Cmu-Chr10:2124994 Cmu11g0495 Cmu-Chr11:5359141 1.80E-10 dispersed
Cmu11g0495 Cmu-Chr11:5359141 Cmu09g0081 Cmu-Chr9:1017029 1.60E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0495 K15121 - csv:101206140 575.089