Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g0495 | CTTGATAAAGCGAAATTTTATGGCGTAGGAGCTGGTCTCTTTACAGGAATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACAAGGATGCAGGTTGCTGTAAAGGATTCTGCCGAGAAAAATGCCCTGTCTGTTATTAAGGGCTTACTGAAGAATGACGGGGTTCCTGGTCTTTACAGAGGGTTTGGCACAGTAATAACTGGTGCAATTCCTGCCAGGATTATCTTTCTTACTGCTTTGGAGACAACCAAAGTGGGAGCCTATAAACTGGTTGAGCCATTTAAATTTTCTGAACCTACACAGGCTGCTATGGCAAATGGGTTAGCTGGCATGACTGCCTCACTTTTTTCTCAAGCTGTTTTTGTTCCAATTGATGTGATTAGTCAGAAGCTCATGGTTCAAGGATACTCAGGAAATACAAGATATAATGGGGGTTTAGATGTTGCTCGTAAACTGATAAAGTCTAATGGGATCCGGGGATTGTATAAAGGTTTTGGGTTATCTGTTATGACCTACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCATCATCTGGAGATTCTTAGGTCAAAACTCTGCTTCTGAGAAATTTGCTCCCAGCCATACCCAACTTATTTCAGTTCAAGCTGCGGGTGGAATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCTTTGGACACCATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTGATCGCTGAGGATGGATGGAAAGGTTTATATAGGGGGCTGGGTCCTCGGTTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAAGCGGTTGTGTGCAAAAGATGAACAGACTTGA | 906 | 43.49 | LDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVIKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAYKLVEPFKFSEPTQAAMANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKSNGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRIIWRFLGQNSASEKFAPSHTQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGLYRGLGPRFFSMSAWGTSMILAYEYLKRLCAKDEQT | 301 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5359141 | 5363952 | - | CmPI595203_11g004950.1 | Cmu11g0495 | 429017 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g0495 | 301 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 1 | 300 | - | - | |
Cmu11g0495 | 301 | PRINTS | Mitochondrial carrier protein signature | 19 | 33 | IPR002067 | GO:0055085(InterPro) | |
Cmu11g0495 | 301 | PRINTS | Mitochondrial carrier protein signature | 163 | 181 | IPR002067 | GO:0055085(InterPro) | |
Cmu11g0495 | 301 | PRINTS | Mitochondrial carrier protein signature | 219 | 241 | IPR002067 | GO:0055085(InterPro) | |
Cmu11g0495 | 301 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 210 | 294 | IPR018108 | - | |
Cmu11g0495 | 301 | FunFam | Mitochondrial substrate carrier family protein | 7 | 298 | - | - | |
Cmu11g0495 | 301 | Pfam | Mitochondrial carrier protein | 11 | 85 | IPR018108 | - | |
Cmu11g0495 | 301 | Pfam | Mitochondrial carrier protein | 104 | 191 | IPR018108 | - | |
Cmu11g0495 | 301 | Pfam | Mitochondrial carrier protein | 215 | 297 | IPR018108 | - | |
Cmu11g0495 | 301 | SUPERFAMILY | Mitochondrial carrier | 4 | 291 | IPR023395 | - | |
Cmu11g0495 | 301 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 102 | 190 | IPR018108 | - | |
Cmu11g0495 | 301 | Gene3D | Mitochondrial carrier domain | 6 | 301 | IPR023395 | - | |
Cmu11g0495 | 301 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 2 | 87 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu05g0749 | Cmu-Chr5:6612702 | Cmu11g0495 | Cmu-Chr11:5359141 | 3.00E-82 | dispersed | |
Cmu05g1857 | Cmu-Chr5:28589918 | Cmu11g0495 | Cmu-Chr11:5359141 | 7.20E-66 | dispersed | |
Cmu09g0166 | Cmu-Chr9:1800888 | Cmu11g0495 | Cmu-Chr11:5359141 | 5.00E-12 | dispersed | |
Cmu10g1014 | Cmu-Chr10:2124994 | Cmu11g0495 | Cmu-Chr11:5359141 | 1.80E-10 | dispersed | |
Cmu11g0495 | Cmu-Chr11:5359141 | Cmu09g0081 | Cmu-Chr9:1017029 | 1.60E-69 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g0495 | K15121 | - | csv:101206140 | 575.089 |