Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0497 ATGGCGTTGGCCATGGTGATTCTTGCTCTGTTTCTACTCCTCTGTTTTTGCGCTGCTTTGCTACGATGGAATGAAGTTCGATATAGCAAAAAGGGGTTGCCTCCAGGTACAATGGGATGGCCTGTTTTTGGGGAAACTACTGAGTTTCTTAAACAAGGTCCAAACTTTATGAAATCTCAAAGAGCGAGGTATGGGAGCATTTTCAAGTCCCATATTTTGGGGTGTCCTACGATTGTTTCTATGGATCCTGAGGTTAATAGATATGTTTTAATGAATGAATCAAAAGGGCTTGTCCCTGGTTACCCTCAATCCATGCTTGACATACTTGGAAAATGCAATATCGCCGCCGTCCATGGCGGCGCTCACAAGCTCATGAGAGGTGCTCTGCTTGCTATTGTTAGCCCCACCATGATTAAAGACCGTCTTCTTCCTAAAATCGATGACTTTATGCGATCTCATTTGAGGAATTGGGATCCCCAAATCATTGATATCCAAGAAAAGACTAAAGAGATGGCTCTCCGGTCGTCTTTGAAGCAGATTGCTGGAATCGAATCCGGTCCGTTGTCAGAATCTTTCATCCCGGAGTTCTTCAAGCTCGTCCTCGGCACCCTCTCGCTCCCCATCGATCTTCCCGGCACGAACTACCGCCGAGGAATTCAGGCCAGGAAGAACATAATAAAGCTATTGCAGCAGCTGATAAATGAGAGAAGAGATTCAAAGATACAAAAGGATGACATGCTTGGGTATTTTATGAGTGAGGAGAACAAATATAAGCTAAACGATGAAGAGATTATTGATCAAATCATCACTCTATTGTACTCTGGCTATGAAACTGTTTCAACAACTTCTATGATGGCTGTAAAGTTTCTCCATGATCATCCCAAAGTTCTTCAGCAACTCAGAGAAGAGCATTTGGCAATCAGAGAGAAGAAAAATCCTGAGGACCCCATTGATTGGGATGATCTTAAAGCAATGAAGTTCACTCGTGCGGTGATAAATGAAACATCAAGGCTGGCCACTATTGTTAATGGGGTTTTGAGGAAAACTACAAAGGACATGGAACTAAATGGCTTTCTCATTCCAAAAGGATGGAGGATTTATGTGTATACTAGAGAGATAAACTATGACCCTTTTCTCTATTCTGAACCATTCACCTTCAACCCTTGGAGATGGCTGGACAAAAACTTAGAGTCCCATAATTACTTCTTCATCTTTGGAGGTGGAACTAGACATTGTCCTGGCAAAGAATTGGGAATTGCAGAGATTTCTACTTTTTTACATTACTTTGTAACTAAATACAGATGGGAAGAAGTTGGAGGAGATAAGCTCTTGAAATTTCCAAGAGTGGAGGCTCCAAGTGGGTTCCACATTAGGGTTTCATCTTACTGA 1389 42.19 MALAMVILALFLLLCFCAALLRWNEVRYSKKGLPPGTMGWPVFGETTEFLKQGPNFMKSQRARYGSIFKSHILGCPTIVSMDPEVNRYVLMNESKGLVPGYPQSMLDILGKCNIAAVHGGAHKLMRGALLAIVSPTMIKDRLLPKIDDFMRSHLRNWDPQIIDIQEKTKEMALRSSLKQIAGIESGPLSESFIPEFFKLVLGTLSLPIDLPGTNYRRGIQARKNIIKLLQQLINERRDSKIQKDDMLGYFMSEENKYKLNDEEIIDQIITLLYSGYETVSTTSMMAVKFLHDHPKVLQQLREEHLAIREKKNPEDPIDWDDLKAMKFTRAVINETSRLATIVNGVLRKTTKDMELNGFLIPKGWRIYVYTREINYDPFLYSEPFTFNPWRWLDKNLESHNYFFIFGGGTRHCPGKELGIAEISTFLHYFVTKYRWEEVGGDKLLKFPRVEAPSGFHIRVSSY 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5421664 5424183 + CmPI595203_11g004970.1 Cmu11g0497 429019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0497 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 405 414 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu11g0497 462 Gene3D Cytochrome P450 24 459 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PANTHER CYTOCHROME P450 26 33 433 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Cmu11g0497 462 PRINTS E-class P450 group I signature 369 393 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PRINTS E-class P450 group I signature 263 280 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PRINTS E-class P450 group I signature 402 412 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PRINTS E-class P450 group I signature 283 309 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PRINTS E-class P450 group I signature 329 347 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PRINTS E-class P450 group I signature 412 435 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 Pfam Cytochrome P450 34 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PRINTS P450 superfamily signature 274 291 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PRINTS P450 superfamily signature 330 341 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PRINTS P450 superfamily signature 412 423 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 PRINTS P450 superfamily signature 403 412 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 CDD CYP90-like 60 460 - -
Cmu11g0497 462 SUPERFAMILY Cytochrome P450 27 442 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0497 462 FunFam Cytochrome P450 85A1 24 461 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1344 Cmu-Chr7:28728087 Cmu11g0497 Cmu-Chr11:5421664 1.40E-69 dispersed
Cmu09g2127 Cmu-Chr9:37407452 Cmu11g0497 Cmu-Chr11:5421664 1.00E-44 dispersed
Cmu10g1033 Cmu-Chr10:2328823 Cmu11g0497 Cmu-Chr11:5421664 3.80E-57 dispersed
Cmu10g1034 Cmu-Chr10:2338620 Cmu11g0497 Cmu-Chr11:5421664 8.90E-62 dispersed
Cmu10g1187 Cmu-Chr10:4551434 Cmu11g0497 Cmu-Chr11:5421664 1.30E-78 dispersed
Cmu11g0497 Cmu-Chr11:5421664 Cmu01g1856 Cmu-Chr1:32157693 6.20E-17 dispersed
Cmu11g0497 Cmu-Chr11:5421664 Cmu09g0055 Cmu-Chr9:798985 8.20E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0497 K09590 - csv:101206858 877.47