Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu11g0553 | ATGCCCATCATGTTGCCACTCCTTACAACTTTAGCTTTCCTAACGACGTCGTTTTTCATCTTCTCTTTATTATACGACACCGTTTCTTGCTACTGGTTCACTCCTAGACGCATCAAGAAGAAGATGGCAAAGCAAGGTGTTCATGGCCCTAAACCCCGCCCTCTCCTCGGCAACATCCTCGACGTCGCCGCCCTCCTCTCCAAATCCACCTCCTCCGACATGCCCTCCATCTCCCACGACCTCGTCCCCCGTCTCCTACCTCATTTCCTCGCCTGGTCCACCCAATTCGGGAAGAGATTTATATTTTGGAATGGGATTGAGCCGAGAATGTGTCTAACAGAAACGGATTTGATAAAAGAGCTTTTGTCAAAATACAGTGCGGTTTCGGGAAAGTCATGGCTCCAACAACAAGGCTCTAAGCACTTTATTGGGAGAGGTCTTTTAATGGCCAACGGCCAAAATTGGTTCCATCAACGCCATATTGTCGCGCCGGCTTTCGTCGGGGATCGACTTAAGAGTTACGCGGGGTATATGGTGGAGTGCACAAAGGAGATGCTTGAATCAATAGAAAATGAGGTAAAATCGGGGCGATCAGAGTTTGAAATCGGCGAGTATATGACTAGACTCACTGCTGATATAATTTCAAGAACCGAGTTTGAAAGCAGCTACGAAAAGGGAAAACAAATCTTTCATTTACTTACTGTTTTACAGCATCTTTGTGCCCAGGCCAGCCGCCACCTCTGCCTTCCCGGTAGCCGGTTTTTTCCAAGTAAGTATAACAGAGAGATAAAGGCATTGAAAGGGAAAGTGGAGGAGTTGTTAATGGAGATAATACAGAGTAGAAGGGATTGTGTGGAAATTGGAAGAAGCAGTTCATATGGAAATGATTTATTGGGAATGTTGCTAAATGAAATGCAAAAGAAAAAAGATGGGAATGGTTTGAGTTTGAATTTGCAAATTATAATGGATGAATGCAAAACCTTCTTCTTTGCTGGCCATGAAACCACTGCCCTTTTGCTCACTTGGACTGTCATGTTATTAGCCACTAACCCTTCTTGGCAACACAAGGTTCGAACCGAAGTTATGGCCATTTGCGGTTCTCAAACGCCTTCCTTTCATCATCTTTCCAAACTCTCCCTGTTGAGTATGGTGATAAATGAATCACTAAGACTATACCCACCAGCAAGTATTCTTCCAAGGATGGCATTTGAAGATATAAAACTTGGAGATTTAGAGATCCCAAAAGGCTTATCAATATGGATTCCAGTGTTAGCCATTCATCATAGTGAAGAATTATGGGGAAAAGATGCAAATGAGTTCAATCCAGAAAGATTTGCCAATTCAAAAGCTTTTACTTCTGGTGGATTCATCCCTTTTGCTTCTGGCCCTCGCAACTGTGTTGGCCAATCTTTTGCTCTTATGGAAACTAAGATCATCTTGGCTATGCTCATCTCCAAATTTAGCTTCACCATCTCGGATAATTATCGGCATGCGCCCGTCGTCGTGCTCACCATAAAACCTAAATATGGTGTTCAAGTTTGCTTGAAGCCTTTGAATTAA | 1560 | 43.46 | MPIMLPLLTTLAFLTTSFFIFSLLYDTVSCYWFTPRRIKKKMAKQGVHGPKPRPLLGNILDVAALLSKSTSSDMPSISHDLVPRLLPHFLAWSTQFGKRFIFWNGIEPRMCLTETDLIKELLSKYSAVSGKSWLQQQGSKHFIGRGLLMANGQNWFHQRHIVAPAFVGDRLKSYAGYMVECTKEMLESIENEVKSGRSEFEIGEYMTRLTADIISRTEFESSYEKGKQIFHLLTVLQHLCAQASRHLCLPGSRFFPSKYNREIKALKGKVEELLMEIIQSRRDCVEIGRSSSYGNDLLGMLLNEMQKKKDGNGLSLNLQIIMDECKTFFFAGHETTALLLTWTVMLLATNPSWQHKVRTEVMAICGSQTPSFHHLSKLSLLSMVINESLRLYPPASILPRMAFEDIKLGDLEIPKGLSIWIPVLAIHHSEELWGKDANEFNPERFANSKAFTSGGFIPFASGPRNCVGQSFALMETKIILAMLISKFSFTISDNYRHAPVVVLTIKPKYGVQVCLKPLN | 519 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 6084655 | 6088320 | + | CmPI595203_11g005530.1 | Cmu11g0553 | 429075 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu11g0553 | 519 | Coils | Coil | 263 | 283 | - | - | |
| Cmu11g0553 | 519 | Coils | Coil | 179 | 199 | - | - | |
| Cmu11g0553 | 519 | PRINTS | E-class P450 group I signature | 423 | 447 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PRINTS | E-class P450 group I signature | 456 | 466 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PRINTS | E-class P450 group I signature | 466 | 489 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PRINTS | E-class P450 group I signature | 209 | 227 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PRINTS | E-class P450 group I signature | 93 | 112 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PRINTS | E-class P450 group I signature | 340 | 366 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PRINTS | E-class P450 group I signature | 320 | 337 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 18 | 511 | IPR050665 | GO:0004497(PANTHER) | |
| Cmu11g0553 | 519 | Pfam | Cytochrome P450 | 93 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | Gene3D | Cytochrome P450 | 31 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PRINTS | P450 superfamily signature | 466 | 477 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PRINTS | P450 superfamily signature | 331 | 348 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PRINTS | P450 superfamily signature | 383 | 394 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | PRINTS | P450 superfamily signature | 457 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | SUPERFAMILY | Cytochrome P450 | 49 | 517 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g0553 | 519 | CDD | CYP72_clan | 86 | 512 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu01g0436 | Cmu-Chr1:4487651 | Cmu11g0553 | Cmu-Chr11:6084655 | 2.10E-81 | dispersed | |
| Cmu11g0553 | Cmu-Chr11:6084655 | Cmu11g1704 | Cmu-Chr11:29238073 | 6.80E-89 | dispersed | |
| Cmu05g1260 | Cmu-Chr5:13631474 | Cmu11g0553 | Cmu-Chr11:6084655 | 2.30E-233 | transposed | |
| Cmu11g0553 | Cmu-Chr11:6084655 | Cmu07g0584 | Cmu-Chr7:7265980 | 1.80E-89 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu11g0553 | K10717 | - | csv:101215037 | 974.926 |