Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g0584 | ATGTCAAGAGAAAGAGAATTGCAACAGGTCGATGAGACCGGGAAGAAAATAAAGAGGGAAATTGATCAAAGTTTTTATGATCCATTAATGGGAAGAAGACATATTTTAAGTCCAAGTACTGGGACGACATTGAATACAATAACGCCATGTGCAGCTTGTAAGCTTTTAAGAAGAAGATGTGCTCAAGAATGTCCATTTTCTCCATATTTTTCTCCACATGAACCCCAAAAATTTGCTTCGGTTCATAAGGTTTTTGGTGCAAGCAACGTGGCTAAGATGCTAATGGAGGTACCGGAGAGTCAAAGAGCGGACGCAGCAAACAGCCTTGTTTATGAAGCAAATCTAAGGCTAAGAGATCCCGTGTATGGTTGCATGGGAGTCATTTCTGCTCTCCAACACCAACTTCATACTTTACAATCTGACCTCAATTCCATCAGAACTCAGATTTTCAACTTCAAATTTACACAACATAATAATTCACACATTCCTAATTTCATTTCCGCCGCCGCAACCCCGCCTGCAGCCCCGCCGACTCCGCCACATTCTCAGCCGCCTCCCCTCTCTCTTCCGCCCCCTCTTCCTTCCTCCTCTTCCATCTTTTCATCTCCTATTATCACTACTACTACTGCTGCCCCTGAATTAATTAACCCCATCTCAACAACTCAACATATCTCCTACTTTGGTTAA | 687 | 42.94 | MSRERELQQVDETGKKIKREIDQSFYDPLMGRRHILSPSTGTTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVAKMLMEVPESQRADAANSLVYEANLRLRDPVYGCMGVISALQHQLHTLQSDLNSIRTQIFNFKFTQHNNSHIPNFISAAATPPAAPPTPPHSQPPPLSLPPPLPSSSSIFSSPIITTTTAAPELINPISTTQHISYFG | 228 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6419537 | 6422004 | + | CmPI595203_11g005840.1 | Cmu11g0584 | 429106 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g0584 | 228 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 47 | 173 | - | - | |
Cmu11g0584 | 228 | MobiDBLite | consensus disorder prediction | 166 | 193 | - | - | |
Cmu11g0584 | 228 | ProSiteProfiles | LOB domain profile. | 48 | 149 | IPR004883 | - | |
Cmu11g0584 | 228 | Pfam | Lateral organ boundaries (LOB) domain | 49 | 145 | IPR004883 | - | |
Cmu11g0584 | 228 | Coils | Coil | 128 | 148 | - | - | |
Cmu11g0584 | 228 | MobiDBLite | consensus disorder prediction | 170 | 193 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu05g0881 | Cmu-Chr5:8005628 | Cmu11g0584 | Cmu-Chr11:6419537 | 2.90E-29 | dispersed | |
Cmu09g1951 | Cmu-Chr9:35582584 | Cmu11g0584 | Cmu-Chr11:6419537 | 3.20E-13 | dispersed | |
Cmu10g2152 | Cmu-Chr10:27552403 | Cmu11g0584 | Cmu-Chr11:6419537 | 2.80E-32 | dispersed | |
Cmu11g0584 | Cmu-Chr11:6419537 | Cmu11g1129 | Cmu-Chr11:21248884 | 7.30E-35 | dispersed | |
Cmu11g0584 | Cmu-Chr11:6419537 | Cmu07g0544 | Cmu-Chr7:6422346 | 4.10E-54 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
7128 | PF03195 | LOB | 1.90E-40 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g0584 | - | - | - | 0.0 |