Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0672 ATGGCTGAGATTTGGTTTGGTGCAGATGCCGATCCCCCTTCCCCGCCAAAATCTCGACCTGGCCGAAAAATGGAGTTTCTTGAGCTTAAAGCCGCCGCCGATAATGCCGGCGGTGCTTCCTCGTCCGGACGGAAACGCCGGAGTGTGCAACCGTTTCCACGGCGGTGCGAAAATGAAGACGATGAAAACAGGGGGCAGAGGAATGATGATAGGAATGATGATGAGGTTGAAGTTAAATATGGGGTGACCTCTGTATGCGGAAGAAAAAGAGAAATGGAAGACACGGTTTCTGTTCATCTTTACTTTGCTACTCAAAAAAATGAACCCCAAATTCCTCTTCATTTTTTTGGGGTGTTCGATGGCCATGGTTGCTCTCATGTGTCGAAGAGCTGTAAGAATCGAATGCATGAAATAGTGAAAGAAGAGATTGATGAAATGGAAATAGAAGAAACAGAGGAATGGAAGAAAATAATGAGAAGAAGCTTTGGGCGTATGGATGGGGAAGTAATGAAACAGAGAGAAGAAGCCTCTTCTTCTGAATCTAATAATATTAGTTGTAGATGCGAACTTCAAACTCCAAATCGATACGACACTGTTAGATCCAATGCTCTCATTGCTCTCTTAATGCCACACAAGTTCATCATCGCCAACTGCGGCGATTCCAGCGCCGTCCTTTCCCGGAAAACTACCGGAATCCTCCCTCTCTCCTCCGAGCATAAGCCAGATCGAGGAGATGAATTGTCACGAATAGAATCACGTGGAGGGCGCGTGATATACCGGGAAGGGGCAAGAGTGTTGGGAGTTTATACAACATCAAGAGCAATAGGCGATGGTTGTTTAAAGCCTTACGTGATATCGGAGCCGGAGGTGGTGATTATGGATCGAACAGCGGAGGATGAGTTCATGATATTGGCTACCGATGGCCTGTGGGACGTGGTTACAAATGAAACTGCATGCGATGCAGTCCGAACGTGCATGCGGGCACACCGCCCGTTGTCGTCCTCGTCAGAATCGTCGGGATCTATGAGTGGCGGCCCTGACAAAACATGTTCCGACGCCTCCATTTTACTGACCAAGTTGGCCATGGCCAAGCATAGTTCAGATAACATTACCATTGTGGTTATAGATTTGAGAACATCATCACCACAACCAAAGCATTGA 1161 47.2 MAEIWFGADADPPSPPKSRPGRKMEFLELKAAADNAGGASSSGRKRRSVQPFPRRCENEDDENRGQRNDDRNDDEVEVKYGVTSVCGRKREMEDTVSVHLYFATQKNEPQIPLHFFGVFDGHGCSHVSKSCKNRMHEIVKEEIDEMEIEETEEWKKIMRRSFGRMDGEVMKQREEASSSESNNISCRCELQTPNRYDTVRSNALIALLMPHKFIIANCGDSSAVLSRKTTGILPLSSEHKPDRGDELSRIESRGGRVIYREGARVLGVYTTSRAIGDGCLKPYVISEPEVVIMDRTAEDEFMILATDGLWDVVTNETACDAVRTCMRAHRPLSSSSESSGSMSGGPDKTCSDASILLTKLAMAKHSSDNITIVVIDLRTSSPQPKH 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7393816 7395156 - CmPI595203_11g006720.1 Cmu11g0672 429194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0672 386 SUPERFAMILY PP2C-like 78 378 IPR036457 -
Cmu11g0672 386 Gene3D - 69 382 IPR036457 -
Cmu11g0672 386 MobiDBLite consensus disorder prediction 1 74 - -
Cmu11g0672 386 MobiDBLite consensus disorder prediction 50 74 - -
Cmu11g0672 386 ProSiteProfiles PPM-type phosphatase domain profile. 79 377 IPR001932 -
Cmu11g0672 386 FunFam Protein phosphatase 2C 50 78 383 - -
Cmu11g0672 386 Pfam Protein phosphatase 2C 79 370 IPR001932 -
Cmu11g0672 386 PANTHER PROTEIN PHOSPHATASE 67 376 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu11g0672 386 CDD PP2Cc 78 377 IPR001932 -
Cmu11g0672 386 ProSitePatterns PPM-type phosphatase domain signature. 115 123 IPR000222 GO:0043169(InterPro)
Cmu11g0672 386 SMART PP2C_4 69 375 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0943 Cmu-Chr8:21761824 Cmu11g0672 Cmu-Chr11:7393816 3.80E-47 dispersed
Cmu09g0018 Cmu-Chr9:463197 Cmu11g0672 Cmu-Chr11:7393816 8.70E-15 dispersed
Cmu11g0672 Cmu-Chr11:7393816 Cmu11g0873 Cmu-Chr11:11452378 3.80E-20 dispersed
Cmu11g0672 Cmu-Chr11:7393816 Cmu03g0742 Cmu-Chr3:1593010 4.80E-87 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0672 K14497 - csv:101220425 485.723