Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0675 ATGGCGGATAGATGTTGGGGTGGAATTGGGAATCTTGCACACACAGAACAAGAACATGGTACTAAGAATGAAGATGAGGATGGAATTAAAACCAAGAGACGGCCACGAGGGAGACCACCAGGCTCAAAAAACAAGCCAAAGCCACCCATTGTTATCACTAAACATACTCCCAATGCCTTTCAAACCCACGTTTTCGAAATCACCACCGCCACCGACATTGCCCACTCCATTTCCACTTTCGCCCATCGCCGCCACCGTGGGGTTTCCATTCTCAGCGCCACCGGCCTCGTCGCTGACGTCACTCTCCGACAACCCCCCGGCGTCATTACCCTCCACGAACGCTTCGAGATTTTATCTCTCTCTGGCGCTTTCCTCCCCACACCCTCCCCCCACGGGGCTACCTCCTTGACCGTGTATCTCGCCGGCGGCCAAGGCCGGGTCGTTGGAGGCCTCGTCGCCGGTCCCCTCATCGCCGCTGGCCCCGTCATTGTAGTTGCAGCTTCATTTACCAACGCTATGTATGAAAAATTACCGATTGAAGAAGATGAAGAGAATGCAGAGGAGAAGAAATTAGAAGAAGAAAATATTAATGGAAATAATTCAGTGGGAGAATCATCATCAGTGGCAGCAGCAGCAGCAGCAGCAGCAACAACAACTTCTTTGCCAGTTTATAATTTGATTCCTAATACTCAAATTTCACAAGAAATGTTTTGGGCTCCTCTTCCTCTTCCTCCTCCATCTTATTAA 747 50.07 MADRCWGGIGNLAHTEQEHGTKNEDEDGIKTKRRPRGRPPGSKNKPKPPIVITKHTPNAFQTHVFEITTATDIAHSISTFAHRRHRGVSILSATGLVADVTLRQPPGVITLHERFEILSLSGAFLPTPSPHGATSLTVYLAGGQGRVVGGLVAGPLIAAGPVIVVAASFTNAMYEKLPIEEDEENAEEKKLEEENINGNNSVGESSSVAAAAAAAATTTSLPVYNLIPNTQISQEMFWAPLPLPPPSY 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7436826 7437572 + CmPI595203_11g006750.1 Cmu11g0675 429197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0675 248 MobiDBLite consensus disorder prediction 1 53 - -
Cmu11g0675 248 MobiDBLite consensus disorder prediction 181 203 - -
Cmu11g0675 248 Coils Coil 179 199 - -
Cmu11g0675 248 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 17 240 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cmu11g0675 248 CDD DUF296 61 169 IPR005175 -
Cmu11g0675 248 Pfam Plants and Prokaryotes Conserved (PCC) domain 61 170 IPR005175 -
Cmu11g0675 248 SUPERFAMILY AF0104/ALDC/Ptd012-like 57 183 - -
Cmu11g0675 248 Gene3D - 61 191 - -
Cmu11g0675 248 ProSiteProfiles PPC domain profile profile. 57 192 IPR005175 -
Cmu11g0675 248 MobiDBLite consensus disorder prediction 17 34 - -
Cmu11g0675 248 PIRSF ESCAROLA 9 241 IPR014476 GO:0003680(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu09g1156 Cmu-Chr9:12476026 Cmu11g0675 Cmu-Chr11:7436826 8.60E-51 dispersed
Cmu10g1022 Cmu-Chr10:2183337 Cmu11g0675 Cmu-Chr11:7436826 4.90E-48 dispersed
Cmu11g0675 Cmu-Chr11:7436826 Cmu11g1456 Cmu-Chr11:26790324 3.70E-32 dispersed
Cmu11g0675 Cmu-Chr11:7436826 Cmu07g0391 Cmu-Chr7:3988582 1.70E-53 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0675 - - - 0.0