Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0771 ATGGCCATGCGAGTGGTGCTGTCATTGACTCTTCTCTTCATTCTCATTGGGGTCGCCCAGGCCCAGCTCTCCCTCAACTTCTACAATTCAACGTGCCCAAATGTCGAACAAATCGTTCGCCAGGCCGTCACCCTAAAGTTTAATCAAACATTCGTTACTGTTCCCGCAACTCTAAGGCTCTTCTTCCATGACTGCTTTGTTCAGGGATGTGATGCTTCGGTTATGATAGCATCCGCAAGTGGTGATGCAGAAAAAGACGCCGAGGACAACTTGTCATTGGCAGGAGATGGATTTGATACCGTGGTTAAAGCTAAACAAGCAGTGGAAGCTCAATGTCCTGGAATAGTATCGTGTGCGGATGTATTAGCCATCGCAGCAAGGGACGTCGTGGTTTTGGCAAGAGGGCCAAATTTCGCTGTTGAATTAGGACGGCGAGATGGGCTAATCTCGAAAGCATCTTTAGTAGCCGGAAACTTACCGGGACCAAACTTCAACTTGAGCGAATTAAACGCAATGTTCGCCAAAAACAACCTAACCCAAACCGAAATGATTGCGTTATCAGGAGCTCACACGGTTGGGTTCTCACATTGCAACCGTTTTGCAAACCGTCTCTACAACTTCTCGGCCACTTCTAATGTGGACCCTTCTCTGGACTCGGACTACGCCCAGCAGCTCATAGACGCCTGCCCACAAAACGTGGATCCCAGAGTGGCTGTGGACATGGACACTATTACCCCAAGGAAAATGGATAATGTGTATTACCAAAATCTTGTGAACCACAAGGGGCTATTCACGTCGGATCAGGTGCTTTTTACGGACCCGTTGTCGCAACCGACGGTGAGTGGCTTTGCTAATGACAATCATGGGTTCAAGAAAGCGTTTGCGGCGGCTATGGTTCAGCTTGGGAGAGTGGGGGTTAAGACTGGGGTTTTGGGTGAGATTAGAACTGATTGTACTGCATTTAATTCCTAA 972 48.35 MAMRVVLSLTLLFILIGVAQAQLSLNFYNSTCPNVEQIVRQAVTLKFNQTFVTVPATLRLFFHDCFVQGCDASVMIASASGDAEKDAEDNLSLAGDGFDTVVKAKQAVEAQCPGIVSCADVLAIAARDVVVLARGPNFAVELGRRDGLISKASLVAGNLPGPNFNLSELNAMFAKNNLTQTEMIALSGAHTVGFSHCNRFANRLYNFSATSNVDPSLDSDYAQQLIDACPQNVDPRVAVDMDTITPRKMDNVYYQNLVNHKGLFTSDQVLFTDPLSQPTVSGFANDNHGFKKAFAAAMVQLGRVGVKTGVLGEIRTDCTAFNS 323
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8195461 8197066 + CmPI595203_11g007710.1 Cmu11g0771 429293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0771 323 FunFam Peroxidase 160 301 - -
Cmu11g0771 323 PANTHER - 9 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 SUPERFAMILY Heme-dependent peroxidases 22 322 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 Pfam Peroxidase 39 286 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Cmu11g0771 323 Gene3D Peroxidase, domain 2 160 301 - -
Cmu11g0771 323 ProSiteProfiles Plant heme peroxidase family profile. 22 322 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 FunFam Peroxidase 26 168 - -
Cmu11g0771 323 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601(InterPro)
Cmu11g0771 323 Gene3D - 26 322 - -
Cmu11g0771 323 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0771 323 CDD secretory_peroxidase 22 321 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1217 Cmu-Chr2:25019444 Cmu11g0771 Cmu-Chr11:8195461 4.20E-116 dispersed
Cmu03g1384 Cmu-Chr3:9056983 Cmu11g0771 Cmu-Chr11:8195461 5.80E-76 dispersed
Cmu05g1793 Cmu-Chr5:28057743 Cmu11g0771 Cmu-Chr11:8195461 1.80E-103 dispersed
Cmu11g0771 Cmu-Chr11:8195461 Cmu11g0774 Cmu-Chr11:8239138 1.70E-122 dispersed
Cmu11g0771 Cmu-Chr11:8195461 Cmu11g0772 Cmu-Chr11:8206744 7.00E-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0771 K00430 - csv:101213098 556.984