Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0772 ATGGGGATTTTTGTGAGAAAAGGAGATGGGCAGCTGGTGGAAATTTTTTATAAATCCACTTGTCCAAACGTGGAACAAATAGTGAGACAGGCCGTTCAAAACAAGCTCTCCCAAACTACTATTACCATTCCCGCTACTCTCCGTCTCTTCTTCCATGATTGTTTCGTTGAGGGATGCGATGCTTCGATCATGATTTCATCGCCAAACGGAGACGCCGAGAAGGACGCTCAAGATAACCTTTCCCTTGCTGGAGATGGCTTTGACACCGTCGTCAAGGCAAAACAGGCCGTTGAAGCCGCCTGCCCCGGTCGAGTCTCTTGCGCTGACATTTTGGCTCTCGCTGCCCGAGATGCCGTCGTCCTCGCAGGAGGCCCAAATTTCAACGTCGAATTAGGACGTCGTGATGGCCTGATCTCCAAAGCCTCACGTGTCGACGGAAATTTACCATCCCCAAATTTCGACCTCAACACACTGACTTCCATGTTCGCCAGACATGGCCTCTCCCAAACCGACATGATCGCCCTCTCCGGCGCCCACACAATCGGCGCCTCCCACTGCAACCGCTTTTCCGATCGACTCTTCTCTGCTTCCGGTGTAGATCCATCGCTAAATCCTACCTACGCAGAGCAGTTGAAACAAGCGTGCCCTCGAAATGTGGATCCAAATGTGGTGGTGAAGCTGGATCCGACCACTCCAGACACTTTTGACAACGTGTATTACCGAAATCTAATGAACGGAAAAGGACTGTTTAGATCAGATGAGGTTCTGTTCACGAGCTCAGCGTTGAAGGGGACGGTGGTGGGATTTGCGAACAACGGAGGGCAGTTCAATACGGCGTTTGTAGAGGCGATGAGGAAGCTTGGGAGAGTGGGAGTTAAGACGGGGAGAGCTGGAGAGATAAGGAGAGACTGTAGTGCCTTCAATTGA 927 51.35 MGIFVRKGDGQLVEIFYKSTCPNVEQIVRQAVQNKLSQTTITIPATLRLFFHDCFVEGCDASIMISSPNGDAEKDAQDNLSLAGDGFDTVVKAKQAVEAACPGRVSCADILALAARDAVVLAGGPNFNVELGRRDGLISKASRVDGNLPSPNFDLNTLTSMFARHGLSQTDMIALSGAHTIGASHCNRFSDRLFSASGVDPSLNPTYAEQLKQACPRNVDPNVVVKLDPTTPDTFDNVYYRNLMNGKGLFRSDEVLFTSSALKGTVVGFANNGGQFNTAFVEAMRKLGRVGVKTGRAGEIRRDCSAFN 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8206744 8210502 + CmPI595203_11g007720.1 Cmu11g0772 429294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0772 308 CDD secretory_peroxidase 11 307 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu11g0772 308 PRINTS Haem peroxidase superfamily signature 105 122 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Haem peroxidase superfamily signature 171 186 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Haem peroxidase superfamily signature 43 57 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Haem peroxidase superfamily signature 123 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Haem peroxidase superfamily signature 228 243 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 ProSitePatterns Peroxidases proximal heme-ligand signature. 171 181 IPR019793 -
Cmu11g0772 308 SUPERFAMILY Heme-dependent peroxidases 16 308 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 FunFam Peroxidase 149 287 - -
Cmu11g0772 308 Gene3D - 16 308 - -
Cmu11g0772 308 ProSiteProfiles Plant heme peroxidase family profile. 11 308 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 FunFam Peroxidase 15 158 - -
Cmu11g0772 308 PANTHER - 8 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 Pfam Peroxidase 28 272 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 Gene3D Peroxidase, domain 2 149 287 - -
Cmu11g0772 308 PRINTS Plant peroxidase signature 85 98 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Plant peroxidase signature 21 40 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Plant peroxidase signature 242 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Plant peroxidase signature 282 295 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Plant peroxidase signature 104 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Plant peroxidase signature 170 182 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Plant peroxidase signature 45 65 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Plant peroxidase signature 226 241 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu11g0772 308 PRINTS Plant peroxidase signature 123 138 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g1646 Cmu-Chr5:26467439 Cmu11g0772 Cmu-Chr11:8206744 1.80E-63 dispersed
Cmu11g0585 Cmu-Chr11:6426450 Cmu11g0772 Cmu-Chr11:8206744 7.60E-62 dispersed
Cmu11g0772 Cmu-Chr11:8206744 Cmu01g1615 Cmu-Chr1:29853203 5.50E-54 dispersed
Cmu11g0772 Cmu-Chr11:8206744 Cmu11g0774 Cmu-Chr11:8239138 9.60E-123 proximal
Cmu11g0771 Cmu-Chr11:8195461 Cmu11g0772 Cmu-Chr11:8206744 7.00E-116 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0772 K00430 - csv:101213343 543.502