Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0792 ATGGGAATTATTAGTTTGGGAGAAGAATGTTACATGATGAGTTTAGGAAGTGGAGTAGTGTTGGGAGTGATAACGTGGTTGGTTTGGACATGGATCATTGTTCATAGATGGAACCAAAGGAAGAAGACGACAGGTCCTAAAACATGGCCACTCGTAGGAGCAGCAATCGAACAGTTTTTAAATTACCACAGAATGCATGATTGGCTTCTTGGTTACCTTAATCTCTCCAAAACTGTTGTGGTTCCTATGCCTTTCACTACTTATACTTACATTGCTGACCCTGCGAATGTTCAGCATATTCTCAAGACCAACTTTGCTAATTATCCCAAGGGTGATGTGTATCATTCATATATGGAAGTGCTTCTGGGAGATGGGATATTCAACGTAGATGGAGAGCTATGGAGAAAACAAAGGAAAACTGCGAGCTTCGAATTTGCATCTAAGAATTTGAGGGATTTCAGTACCTTAGTTTTCAGAGAGTACACTCTGAAGCTATCAAATATTTTAACAAGGGCCTCTTTAGACAACCAACAAATTGACATGCAGGAATTGTTGATGAGAATGACTTTAGACTCGATATGCAAGGTGGGATTTGGTGTTGAAATTGGATCATTGGCTCCAAATTTGCCAGAAAATGGGTTTGCTAAGGCGTTTGACACAGCCAACATGATCGTCACCCTTCGTTTCATCGATCCTTTATGGAAAATTAAAAAATTTCTGAATTTGGGATCTGAAGCTCTTCTTGATAGGTCCATTAAAATCATCGATGATTTCACCTACTCTGTCATTGCCACTAGGAAAAAAGAGATGCAACAACAACCTCAAACCACATCCAAAGATGCCAATAAGGAGAAAAAACATGACATATTGTCAAGGTTTATTGAGTTAGGCGAAGACCCAAACAACAATTTCACAAACAAAAGCTTAAGAGATGTTGTTCTAAACTTCGTGATTGCTGGACGTGACACAACAGCTGCAACTCTTTCATGGGCTATTTATATGGTAATGACTCATTCTCATGTAGCTCACAAACTTTACTCAGAGCTCAAGAATTTCGAAGAAGAAAGAGCCAAAGAAGAAAACATTTCATTGCTTCAATATCAACCAACTGATCTTCAATCCTTTGAGAGAAGAGTAATGCAATTTTCACAAATCCTCAATTATGATTCCCTTGCTCGATTACACTATTTGCATGCTACCATCACTGAGACACTTCGTCTTTACCCTGCAGTCCCTCAGGACCCAAAGGGAATTTTGGAGGATGATGTATTGCCAGATGGTACAAAGGTAAGAGCAGGAGGAATGGTGACATATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGTTGTGATGCAACTTCATTTAACCCTGAAAGATGGCTCAAACAAGGCATTTTCCACAATGAATCTCCATTCAAGTTCACAGCTTTTCAGGCTGGACCAAGGATTTGCATGGGAAAGGACTCAGCATATCTACAGATGAAAATGGCTCTTGCCATTTTGTGCAGATTCTACAAATTTAGTTTGGTGAGTGGACATCGAGTCAACTACAGAATGATGACTATTCTCTCCATGGCTAATGGCTTGAAAGTTACCGTGGCTCCACGCTCTTAA 1620 39.81 MGIISLGEECYMMSLGSGVVLGVITWLVWTWIIVHRWNQRKKTTGPKTWPLVGAAIEQFLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHILKTNFANYPKGDVYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSTLVFREYTLKLSNILTRASLDNQQIDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENGFAKAFDTANMIVTLRFIDPLWKIKKFLNLGSEALLDRSIKIIDDFTYSVIATRKKEMQQQPQTTSKDANKEKKHDILSRFIELGEDPNNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVAHKLYSELKNFEEERAKEENISLLQYQPTDLQSFERRVMQFSQILNYDSLARLHYLHATITETLRLYPAVPQDPKGILEDDVLPDGTKVRAGGMVTYVPYSMGRMEYNWGCDATSFNPERWLKQGIFHNESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLVSGHRVNYRMMTILSMANGLKVTVAPRS 539
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 8702088 8715036 + CmPI595203_11g007920.1 Cmu11g0792 429314
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0792 539 CDD CYP86A 77 531 - -
Cmu11g0792 539 FunFam Alkane hydroxylase MAH1 38 539 - -
Cmu11g0792 539 PRINTS E-class P450 group I signature 398 416 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 PRINTS E-class P450 group I signature 486 509 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 PRINTS E-class P450 group I signature 476 486 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 PANTHER CYTOCHROME P450 31 531 - -
Cmu11g0792 539 PRINTS P450 superfamily signature 477 486 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 PRINTS P450 superfamily signature 486 497 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 PRINTS P450 superfamily signature 399 410 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 Gene3D Cytochrome P450 29 539 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 Coils Coil 342 362 - -
Cmu11g0792 539 Pfam Cytochrome P450 45 359 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 Pfam Cytochrome P450 378 529 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g0792 539 SUPERFAMILY Cytochrome P450 35 538 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu05g0228 Cmu-Chr5:1931993 Cmu11g0792 Cmu-Chr11:8702088 3.80E-108 dispersed
Cmu10g2637 Cmu-Chr10:33127361 Cmu11g0792 Cmu-Chr11:8702088 4.50E-74 dispersed
Cmu11g0792 Cmu-Chr11:8702088 Cmu01g1662 Cmu-Chr1:30379301 4.00E-15 dispersed
Cmu11g0792 Cmu-Chr11:8702088 Cmu05g0225 Cmu-Chr5:1876953 1.20E-107 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0792 K20495 - csv:101222076 928.317