Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g0914 | ATGGAAGCTCTAAACAGTTGGAGGGAGACTCGGTTGTTTTATCTAGTTCATTTTACTCTTATGATTGGTCAACAGAGTATGAGCTCTTCATCAACTCAACTCTGTGCTTCAAGGATGGGCATCTATGAGCCATTTCACCAGATCAACTCATGGGCAAATGCATTCGGTAGTCGACTAGATACGAGCATATCACCTATTATAAAAGTGGATGACTGTGTAGACATTAAACCCGAGTTTGTTCCTTTTGAATCAATGGATCATCTCGAGAGCAGTCAAGAAATGAACAAGCCAATCGATGATAAGGTACAAAGACGTTTAGCACAAAATCGGGAAGCAGCTCGTAAAAGCCGTATGAGGAAAAAGGTTTATGTGCAGCAGTTAGAAACTAGCCGTTTGAAGCTGCGACTGTTGGAGCAGGAGCTAGAAAGAACTAAGCAACAGAAGGGTACCAGCTGCTTAGTAGATATCAGCCACTTCGGATTCAGCGGATTTGTAAACCCAGGGATTGCTGCATTTGAGATGGAATACAATCACTGGGTTGAAGAGCAACAGAGACAGATCACCGAACTCAGAAAGGCGTTGCAAGTTCATACAACTGATATAGAACTCCAAATTTTAGTGGAGAGCAGCCTAAACCATTACCACAATCTGTTTTGCATGAAAGCCAATGCTGCAAAGGCTGATGTTTTCTATTTAATGTCTGGTATTTGGAGAACATCGGCAGAGCGTTTTTTCCACTGGATAGGAGGATTTCGCCCATCAGAGCTGCTAAACGTTCTGAAGCCATACTTTGAGCCATTAAATGAACAACAAAGAGCCGATATCCACAAGTTGCAACAGTCGTCTCGGCAAGCTGAAGATGCGCTCACACAGGGAATGGAAAAACTGCACCAGAATCTATCCCTCAGCATTGCCAGTGATCCTATAGGAAGCTATATTTCTCAGATGGGTGATGGAATGGAGAAACTAGAAGCACTGGAGAGCTTCGTAAGCCAGCCGAGTGTGTGTTACTCTTTTCTTGAACAGGCAGACCATCTCAGGCAACAAACATTGAAGAGAATGTCTCACATCCTAACCACCAAACAGGCAGCACAAGGCTTGCTCGCTTTGGGCGAGTACTTCCACCGTCTCCGCATCCTCAGTTCGCTCTGGGCTACTCGACCTCGTGAACCTGCCTAG | 1179 | 44.78 | MEALNSWRETRLFYLVHFTLMIGQQSMSSSSTQLCASRMGIYEPFHQINSWANAFGSRLDTSISPIIKVDDCVDIKPEFVPFESMDHLESSQEMNKPIDDKVQRRLAQNREAARKSRMRKKVYVQQLETSRLKLRLLEQELERTKQQKGTSCLVDISHFGFSGFVNPGIAAFEMEYNHWVEEQQRQITELRKALQVHTTDIELQILVESSLNHYHNLFCMKANAAKADVFYLMSGIWRTSAERFFHWIGGFRPSELLNVLKPYFEPLNEQQRADIHKLQQSSRQAEDALTQGMEKLHQNLSLSIASDPIGSYISQMGDGMEKLEALESFVSQPSVCYSFLEQADHLRQQTLKRMSHILTTKQAAQGLLALGEYFHRLRILSSLWATRPREPA | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12420174 | 12424858 | - | CmPI595203_11g009140.1 | Cmu11g0914 | 429436 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g0914 | 392 | PANTHER | TRANSCRIPTION FACTOR TGA9 | 27 | 391 | - | - | |
Cmu11g0914 | 392 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 104 | 119 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu11g0914 | 392 | Coils | Coil | 127 | 147 | - | - | |
Cmu11g0914 | 392 | Coils | Coil | 268 | 288 | - | - | |
Cmu11g0914 | 392 | ProSiteProfiles | DOG1 domain profile. | 169 | 387 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cmu11g0914 | 392 | Pfam | Seed dormancy control | 186 | 261 | IPR025422 | GO:0006351(InterPro)|GO:0043565(InterPro) | |
Cmu11g0914 | 392 | Coils | Coil | 180 | 200 | - | - | |
Cmu11g0914 | 392 | SMART | brlzneu | 97 | 150 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu11g0914 | 392 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 99 | 143 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cmu11g0914 | 392 | FunFam | BZIP family transcription factor | 100 | 150 | - | - | |
Cmu11g0914 | 392 | Gene3D | - | 100 | 152 | - | - | |
Cmu11g0914 | 392 | SUPERFAMILY | Leucine zipper domain | 101 | 142 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu07g0936 | Cmu-Chr7:23565417 | Cmu11g0914 | Cmu-Chr11:12420174 | 1.10E-93 | dispersed | |
Cmu10g2471 | Cmu-Chr10:31315563 | Cmu11g0914 | Cmu-Chr11:12420174 | 2.30E-65 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
7144 | PF14144 | DOG1 | 2.00E-28 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g0914 | K14431 | - | csv:101217648 | 685.256 |