Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g0957 ATGGGGCTATTGATAAGTTGCTCTTGGTTCTACATCGGCTTCAAGAGATGGAAGCTCATAAAACTCAGAGAATATTTCTTCCGACAAAATGGAGGATTAATGTTTGAGCAACAACTTTCCATCCGAGACGACGCCGCACAAACCGCTAAACTTTTCACAGCTGAGGAATTACGGAAAGCCACTAACAACTACTCTGACGACCGAATCGTCGGCAAAGGCGGCTTCGGAACAGTCTACAAAGGCATCCTCCCTACCGGCGCCGCCGTCGCCATCAAGAAATCCAAGATCGTCGATAAAACTCAGAACAAACAGTTCATCAACGAAGTCATTGTCCTCTCACAGATCAATCATCGAAACACAGTCAAGCTCTTAGGCTGTTGCTTGGAAGAAGAAGTTCCTCTTCTCGTCTACGAATTCGTCTCCAATGGCACGCTCTTCGATCACATTCACAAGAGAAAATCACAGCGCTCTATTCCTTGGAAGATCCGCCTCAAAATCGCGTCCGAAACCGCCGGAGTACTCTCCTATCTTCACTCCTCCGCCACTATTCCGATCATTCACAGAGATGTCAAATCCACAAACATTCTCCTCGACGAAAATTTCACTGCGAAGGTCTCCGATTTTGGGGCTTCCAAACTAGTTCCTTTAGATCAGGTCGATTTGAACACGATCGTGCAAGGAACTCTGGGATACCTAGATCCAGAGTATTTGCAAACTAGTCAATTGACGGAGAAGAGTGACGTGTACAGTTTCGGCGTTGTTTTGGTCGAATTGATGACCGGAAAAGCTCCTCTGTCCTTCAGCCGATCGGAGGAAGAACGGATTCTATCAATGCATTTTCTAATCGCTCTGAAACAGAATCGGCTTGGAGAAATTGTGGATAGAAGTTTAGGCGGCGATGTGGATGTGGAGCAACTGAAGGAAGTTGCGAACCTTGCGAAGAGGTGTTTGAGAGTGAAGGGAGAAGAAAGGCCGACGATGAAGGAGGTTGCTGCAGAGCTTGAAGGATTATGTCAAATGGCGTTCGGTCATCCATGGAATGTTGATAAATCTTCGTCTGTGGAAGGAGGAGAGCTTTTGGTTAATGAAGAAGATAAAAATGAAGTTCCATTTGATAGTTTGCTTTTCCCCATCAACCAAATGATACCAAACGCACGTTCTGCCAGGTTTTAA 1173 45.78 MGLLISCSWFYIGFKRWKLIKLREYFFRQNGGLMFEQQLSIRDDAAQTAKLFTAEELRKATNNYSDDRIVGKGGFGTVYKGILPTGAAVAIKKSKIVDKTQNKQFINEVIVLSQINHRNTVKLLGCCLEEEVPLLVYEFVSNGTLFDHIHKRKSQRSIPWKIRLKIASETAGVLSYLHSSATIPIIHRDVKSTNILLDENFTAKVSDFGASKLVPLDQVDLNTIVQGTLGYLDPEYLQTSQLTEKSDVYSFGVVLVELMTGKAPLSFSRSEEERILSMHFLIALKQNRLGEIVDRSLGGDVDVEQLKEVANLAKRCLRVKGEERPTMKEVAAELEGLCQMAFGHPWNVDKSSSVEGGELLVNEEDKNEVPFDSLLFPINQMIPNARSARF 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13432391 13434403 - CmPI595203_11g009570.1 Cmu11g0957 429479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g0957 390 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524(InterPro)
Cmu11g0957 390 SMART serkin_6 64 342 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g0957 390 FunFam Wall-associated receptor kinase 2 140 356 - -
Cmu11g0957 390 FunFam Wall-associated receptor kinase 2 34 139 - -
Cmu11g0957 390 Pfam Protein kinase domain 64 331 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g0957 390 Gene3D Phosphorylase Kinase; domain 1 33 139 - -
Cmu11g0957 390 ProSiteProfiles Protein kinase domain profile. 64 347 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g0957 390 CDD STKc_IRAK 70 337 - -
Cmu11g0957 390 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 4 338 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(InterPro)|GO:0007166(PANTHER)
Cmu11g0957 390 Gene3D Transferase(Phosphotransferase) domain 1 140 345 - -
Cmu11g0957 390 SUPERFAMILY Protein kinase-like (PK-like) 48 336 IPR011009 -
Cmu11g0957 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g0571 Cmu-Chr8:17871740 Cmu11g0957 Cmu-Chr11:13432391 5.10E-119 dispersed
Cmu08g0574 Cmu-Chr8:17900906 Cmu11g0957 Cmu-Chr11:13432391 7.50E-94 dispersed
Cmu11g0669 Cmu-Chr11:7376180 Cmu11g0957 Cmu-Chr11:13432391 2.70E-76 dispersed
Cmu11g0957 Cmu-Chr11:13432391 Cmu11g1333 Cmu-Chr11:25552158 4.40E-64 dispersed
Cmu11g0957 Cmu-Chr11:13432391 Cmu11g1898 Cmu-Chr11:30986988 2.00E-117 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75931 PF00069 Pkinase 2.70E-51 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g0957 - - - 0.0