Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g0984 | ATGCAGAATCATCAACAAATGAACTTGGTTTTGTCTACTGATGCAAAGCCAAGGCTGAAATGGACTTCTGAGCTTCATCAAAGATTTGTTGAGGCTGTCAATCATCTTGGTGGAGCAGATAAGGCCACCCCTAAGAGCTTGATGAGAGTTATGGGAATCACTGGCCTTAGTCTTTACCATCTCAAGAGCCACTTACAGAAATACAGGTTGGGAAAAAGCCAGCCGTCTGAAACCAATGCCCAACTCAAGCTAGAAGAGATGCAGAGAAAAGGTGGGAATTTTGATGGAGAAGAAAACAAGGATAGAAGTCAAAATCATAACAAAACAGAGAGCATGAAGATATCCGAAGCTCTAGAAATGCAAATGGAAGTACAGAAGAGATTACAAGAGCAAATAGAGGTACAAAGGCATTTACAACTGAGAATCGAAGCACAAGGAAAATATTTAAAGACAGTGTTAAGAAAGGCACAAGAGACAATTGCAGGGTACGGATGTTGTTCTGAAGCACTTGAAGAAGCCAAAGCAGAGCTCTCTCAATTGGCTTCAATGGTGAGTTCTGGTTGTCAGAGCTCTTCTTTATCAGAACTGACTGACTCGACAGAACTGAATTTCAAAGGCATTGAAAGAGTAGGAAGAAGAATGTGTTCCATTGAAAGCTCTTTAACGTCTTCAGAGACCTCAGAGGAGGCCCCAATCACGAAGAAGAGAAAAGGAAAAGAAAAGGAAAAGGAAAAAGAACAGAGCAGCTCTGTTTCGGAGGGAGATTGTAAGAGATTAACAATGCATAAAAGTGATGAGGAACACGAGGAATTCAGAATGATCGACTTGAATGATTCTCAATTTGACGATAATACAAGTGGAATTGAATCACAGTTGATTGAGTTCCTTTAA | 891 | 40.4 | MQNHQQMNLVLSTDAKPRLKWTSELHQRFVEAVNHLGGADKATPKSLMRVMGITGLSLYHLKSHLQKYRLGKSQPSETNAQLKLEEMQRKGGNFDGEENKDRSQNHNKTESMKISEALEMQMEVQKRLQEQIEVQRHLQLRIEAQGKYLKTVLRKAQETIAGYGCCSEALEEAKAELSQLASMVSSGCQSSSLSELTDSTELNFKGIERVGRRMCSIESSLTSSETSEEAPITKKRKGKEKEKEKEQSSSVSEGDCKRLTMHKSDEEHEEFRMIDLNDSQFDDNTSGIESQLIEFL | 296 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 15202807 | 15204154 | - | CmPI595203_11g009840.1 | Cmu11g0984 | 429506 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g0984 | 296 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 16 | 71 | IPR006447 | GO:0003677(InterPro) | |
Cmu11g0984 | 296 | SUPERFAMILY | Homeodomain-like | 15 | 71 | IPR009057 | - | |
Cmu11g0984 | 296 | MobiDBLite | consensus disorder prediction | 229 | 267 | - | - | |
Cmu11g0984 | 296 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 13 | 73 | IPR017930 | - | |
Cmu11g0984 | 296 | FunFam | Myb family transcription factor | 15 | 73 | - | - | |
Cmu11g0984 | 296 | Gene3D | - | 15 | 73 | - | - | |
Cmu11g0984 | 296 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 3 | 277 | IPR046955 | GO:0003700(InterPro) | |
Cmu11g0984 | 296 | Pfam | Myb-like DNA-binding domain | 18 | 69 | IPR001005 | - | |
Cmu11g0984 | 296 | MobiDBLite | consensus disorder prediction | 218 | 267 | - | - | |
Cmu11g0984 | 296 | MobiDBLite | consensus disorder prediction | 90 | 109 | - | - | |
Cmu11g0984 | 296 | Pfam | MYB-CC type transfactor, LHEQLE motif | 112 | 159 | IPR025756 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu09g2179 | Cmu-Chr9:37863001 | Cmu11g0984 | Cmu-Chr11:15202807 | 9.20E-30 | dispersed | |
Cmu10g2094 | Cmu-Chr10:26849092 | Cmu11g0984 | Cmu-Chr11:15202807 | 4.80E-39 | dispersed | |
Cmu10g2430 | Cmu-Chr10:30721995 | Cmu11g0984 | Cmu-Chr11:15202807 | 6.70E-21 | dispersed | |
Cmu11g0258 | Cmu-Chr11:3136476 | Cmu11g0984 | Cmu-Chr11:15202807 | 4.80E-10 | dispersed | |
Cmu11g0984 | Cmu-Chr11:15202807 | Cmu11g1648 | Cmu-Chr11:28752769 | 4.60E-13 | dispersed | |
Cmu11g0984 | Cmu-Chr11:15202807 | Cmu02g1871 | Cmu-Chr2:32636481 | 7.70E-29 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
7148 | PF00249 | Myb_DNA-binding | 1.10E-06 | CL0123 | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g0984 | - | - | - | 0.0 |