Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g1129 | ATGGCATCGACTTCCTCGAATTCGCCCTGTGCAGCTTGCAAATTTCTCCGGCGAAAATGCCAACCGGAATGTGTTTTTGCGCCTTATTTTCCGCCGGATCAGCCACAGAAATTCGCCAATGTTCATAAGGTATTCGGAGCCAGCAATGTCACAAAACTTCTCAATGAATTGCATCCTCACCAGAGAGAAGACGCCGTCAATTCGCTCGCCTATGAAGCCGATATGCGTCTTCGAGACCCTGTCTATGGCTGTGTTGGCGTAATTTCTCTGCTCCAACACCAACTCTGTAAACTCCAAATGGATCTCACCTGCGCCAAATCCGAACTCTCCAAATATCAAAACCTAGGCATCGGAAACCACGCCGCCCTGATTTCGCCGCCCTCCACTGTTTCCACCGTCGCTCATGGACAGCGGAACCACCAGCCGGCGTTCAATTTTGCTCGAGATCAACCGCATAGCCTCTATCACGATCAATCTTTTCCTCGAGATCAACAACAGCAACAGATGATGCTCCGACGAAGCTTCGACGGCGGTAGCAACTATGACGGACTTTTGGCTGTCAATGTCACCGCCAGTATCGGCAACCTCAGCCACCAGTTCCAGCAACCTCGCGCCGCCGCCGGAGACGATCGTCGCGGTACTCTCGATCATTCTTAG | 657 | 52.05 | MASTSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLCKLQMDLTCAKSELSKYQNLGIGNHAALISPPSTVSTVAHGQRNHQPAFNFARDQPHSLYHDQSFPRDQQQQQMMLRRSFDGGSNYDGLLAVNVTASIGNLSHQFQQPRAAAGDDRRGTLDHS | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 21248884 | 21249540 | - | CmPI595203_11g011290.1 | Cmu11g1129 | 429651 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g1129 | 218 | ProSiteProfiles | LOB domain profile. | 8 | 109 | IPR004883 | - | |
Cmu11g1129 | 218 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 7 | 155 | - | - | |
Cmu11g1129 | 218 | Pfam | Lateral organ boundaries (LOB) domain | 9 | 106 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g1297 | Cmu-Chr1:25547676 | Cmu11g1129 | Cmu-Chr11:21248884 | 7.70E-42 | dispersed | |
Cmu01g2437 | Cmu-Chr1:36319110 | Cmu11g1129 | Cmu-Chr11:21248884 | 2.00E-31 | dispersed | |
Cmu02g1329 | Cmu-Chr2:26716473 | Cmu11g1129 | Cmu-Chr11:21248884 | 2.80E-45 | dispersed | |
Cmu06g1772 | Cmu-Chr6:28767374 | Cmu11g1129 | Cmu-Chr11:21248884 | 8.70E-47 | dispersed | |
Cmu09g1851 | Cmu-Chr9:34644362 | Cmu11g1129 | Cmu-Chr11:21248884 | 8.00E-44 | dispersed | |
Cmu11g0584 | Cmu-Chr11:6419537 | Cmu11g1129 | Cmu-Chr11:21248884 | 7.30E-35 | dispersed | |
Cmu11g0609 | Cmu-Chr11:6658568 | Cmu11g1129 | Cmu-Chr11:21248884 | 1.90E-37 | dispersed | |
Cmu11g1129 | Cmu-Chr11:21248884 | Cmu10g2152 | Cmu-Chr10:27552403 | 5.10E-46 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
7154 | PF03195 | LOB | 4.10E-43 | No_clan | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g1129 | - | - | - | 0.0 |