Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1150 ATGGCAAAAGGAGGAGCTCAGAAGAAAGATGTGGCGGTGGCGATCGACAAAGACAAATGTAGTCAACAAGCTTTGAAATGGACAATCGAACGCCTTCTTAGCAGAGGCCAAGTGGTTACTCTGCTTCATGTTAAGCAGAAACCGTCTTCCTCTGCACATTCGATGACGAATATGAGTGCGGATTCGGATGTGGATGAGGCCGCTTTGTATAAACAACAGCTTGATAGTCATGCCAGAGATCAGTTCTTCCTCCCTTTTCGTTGCATTTGCACAAGAAACAATATACCATGCAATGAGGTGATGTTGGATGAAGGAGAGATTCCAAAGACATTAATAAATTATGTCTCCAAAAATGTTATAGACATTTTAGTACTTGGTGCCCCTACAAGATCAATTTACAAGAGATTCAAGTCAGATGTTCCAAGCAGTGTATCAAAAGGAGCACCAGACTTCTGCACTGTTTACACTATTGGCAACAAAGGCAAGGTTTCAGTGAGACAATCCACAGCTCCACCGCCAGCAAAGCCTGTTGCTCCGCCGCGCACCCAACTGCAGCCCGCCCCACCCCGCCCTCAGCTGCTACATCAGCTCACCAATGCCTCGGAAGTTGCGGCCGAGCCGAACCAGCCACGCTCCCAAGCAGCTAAATCTTTAGATACTCAAAACAGCATAAATACTCCTCCTCGTGCCGTTCAAGAAGATTGGGACATCAAATCACCATTTACAAGGCCTGGTTCAAGGGCTTCAATGAGCAAAGTGATGGAACCATTGACGGCGGATTCCGACATATCGTATGTCAGCAGCGGGAGGCGGAGCATGGACCGTGGCTTCCAAGGGGCATGGAACTCCAGCACTTGCACCGACTCGTATCGCCTTTCTAACGTCTCTGAGTTTGAAGTTTCCAGCCCCAGTCCGGCTTCGCCTATGCTGGAAATGGGAGGAGGAACCAACAAATCATCCATTGATAATACTATCAATGATGATGATAATAATAACAACAACAATAGCAATGTCTCTTCTTACCCTCAAGATATGTCATTTTGCTCTTTACAAAGTGAAACATTCTCTTGGCCTTCCAATTCTCACGCTCAGGATGATGTTGAAGCTGAGATGAGAAGACTGAAATTAGAGCTCAAACAAACCATGGACATGTACAGTACGGCCTGCAAAGAAGCCCTAAACGCCAAGCAGAAGGCGATGGAGCTCCATCGCTGGAAAGTGGAAGAAGAGCAAAGGTTAGAAGAGGCGAGAATGGGGGGGGAAGCAGCATTAGCAATGGCGGAGAAGGAGAAGATGAAATGCAAAGCAGCGATGGAGGCAGCTGAAGCTGCACAAAAGATCGCAGTACTTGAGGCGAGGAAAAGAGCGAACGCGGAGAAAATGGTGGACATGGAAGCACAAGAAACGAAAAGAACACTTTCGCTTTCAGGATTCGGCCATGGAGAAATCGGTTACAGAAGGTACACAATCCAGGAAATCGAAACTGCCACGAAAGGCTTTTCTGATTCTCTAAAGATCGGTGAAGGCGGTTACGGTCCAGTCTTCCGTGGAGAACTTGACCACACACCGGTGGCAATCAAGGTTCTCCGGCCGGATGCTGCTCACGGACGATCACAATTTCAGCAAGAGGTTGAAGTTCTAAGTTGTATTCGTCATCCAAACATGGTTCTCCTTCTTGGAGCGTGTCCTGAAAACGGTTGTTTAGTTTACGAATTCATGGCGAATGGAAGCTTAGAAGACTGTCTCTTTCGAAAAGCGAATGATCCAATTCTTTCATGGCAGTTACGATTCCGAATCGCGGCGGAGATCGCTACCGGACTTCTCTTCCTACACCAGGCCAGACCAGAACCGATTGTACACCGCGATCTGAAACCGGGGAACATTTTGCTAGATAGGAACTACGTGAGCAAAATCAGTGACGTCGGACTGGCGAGGCTGGTTCCTCCATCAGTGGCCGATTCAGTGACTCAATATCGGATGACAGCAACGGCAGGGACATTCTTCTACATCGATCCAGAGTATCAGCAAACAGGATTGCTAGGGATTAAATCGGACATTTACTCGTTGGGCGTGATGCTTCTGCAAATAATCACAGCCAGGCCCCCAATCGGACTGGCGCACGCTGTCGAAAGGGCGATTGAGAAGGGGACATTTGCAGAGATGCTTGATCCAGATGTGAAGGACTGGCCGGTTGAAGACGCGTTGAAGTTTGCGAAACTTTCAATTAAGTGCGCAGAAATGAGGAAGAGAGATCGACCAGATCTTGGGAAGGTGGTGCTGCCGGAGCTTAATCGGTTGAGAACAATGGCGGAGGAGAGTATGGGACTTCGGTCGTTCAACGGTGGTAGTACGTGTTCATCGCCATATGCAAGCCAAACTTCTCAGGAAATGATAAGTAGTGTAAATCTGGAGCATTGTGGAGCATGGGTTGAGAGCTCAAGCAGCCAATCAGATAGCAGCATGTCATCATACTCAGGCAAAATACCTTATTGGCTGGACTAG 2502 47.96 MAKGGAQKKDVAVAIDKDKCSQQALKWTIERLLSRGQVVTLLHVKQKPSSSAHSMTNMSADSDVDEAALYKQQLDSHARDQFFLPFRCICTRNNIPCNEVMLDEGEIPKTLINYVSKNVIDILVLGAPTRSIYKRFKSDVPSSVSKGAPDFCTVYTIGNKGKVSVRQSTAPPPAKPVAPPRTQLQPAPPRPQLLHQLTNASEVAAEPNQPRSQAAKSLDTQNSINTPPRAVQEDWDIKSPFTRPGSRASMSKVMEPLTADSDISYVSSGRRSMDRGFQGAWNSSTCTDSYRLSNVSEFEVSSPSPASPMLEMGGGTNKSSIDNTINDDDNNNNNNSNVSSYPQDMSFCSLQSETFSWPSNSHAQDDVEAEMRRLKLELKQTMDMYSTACKEALNAKQKAMELHRWKVEEEQRLEEARMGGEAALAMAEKEKMKCKAAMEAAEAAQKIAVLEARKRANAEKMVDMEAQETKRTLSLSGFGHGEIGYRRYTIQEIETATKGFSDSLKIGEGGYGPVFRGELDHTPVAIKVLRPDAAHGRSQFQQEVEVLSCIRHPNMVLLLGACPENGCLVYEFMANGSLEDCLFRKANDPILSWQLRFRIAAEIATGLLFLHQARPEPIVHRDLKPGNILLDRNYVSKISDVGLARLVPPSVADSVTQYRMTATAGTFFYIDPEYQQTGLLGIKSDIYSLGVMLLQIITARPPIGLAHAVERAIEKGTFAEMLDPDVKDWPVEDALKFAKLSIKCAEMRKRDRPDLGKVVLPELNRLRTMAEESMGLRSFNGGSTCSSPYASQTSQEMISSVNLEHCGAWVESSSSQSDSSMSSYSGKIPYWLD 833
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21749267 21756459 + CmPI595203_11g011500.1 Cmu11g1150 429672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1150 833 Coils Coil 364 384 - -
Cmu11g1150 833 Gene3D Phosphorylase Kinase; domain 1 482 572 - -
Cmu11g1150 833 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 478 572 - -
Cmu11g1150 833 MobiDBLite consensus disorder prediction 192 229 - -
Cmu11g1150 833 MobiDBLite consensus disorder prediction 172 187 - -
Cmu11g1150 833 SUPERFAMILY Protein kinase-like (PK-like) 479 759 IPR011009 -
Cmu11g1150 833 Gene3D HUPs 9 157 IPR014729 -
Cmu11g1150 833 ProSiteProfiles Protein kinase domain profile. 500 763 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1150 833 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 137 - -
Cmu11g1150 833 CDD STK_N 11 161 - -
Cmu11g1150 833 Pfam Universal stress protein family 10 136 IPR006016 -
Cmu11g1150 833 FunFam U-box domain-containing protein 51 573 773 - -
Cmu11g1150 833 Pfam Protein kinase domain 503 754 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1150 833 Gene3D Transferase(Phosphotransferase) domain 1 573 778 - -
Cmu11g1150 833 Coils Coil 424 444 - -
Cmu11g1150 833 SMART serkin_6 500 763 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1150 833 MobiDBLite consensus disorder prediction 163 232 - -
Cmu11g1150 833 PANTHER OS02G0152300 PROTEIN 11 796 IPR051348 -
Cmu11g1150 833 MobiDBLite consensus disorder prediction 313 342 - -
Cmu11g1150 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1150 833 MobiDBLite consensus disorder prediction 300 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu08g1193 Cmu-Chr8:24359784 Cmu11g1150 Cmu-Chr11:21749267 8.50E-216 dispersed
Cmu09g0078 Cmu-Chr9:944752 Cmu11g1150 Cmu-Chr11:21749267 5.30E-154 dispersed
Cmu11g0163 Cmu-Chr11:2098871 Cmu11g1150 Cmu-Chr11:21749267 8.90E-103 dispersed
Cmu11g1150 Cmu-Chr11:21749267 Cmu04g0678 Cmu-Chr4:20888500 8.50E-49 dispersed
Cmu11g1150 Cmu-Chr11:21749267 Cmu08g0944 Cmu-Chr8:21775898 9.00E-184 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75935 PF00069 Pkinase 5.30E-37 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1150 - - - 0.0