Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1155 ATGGACAATTTCATCGGAAAAAGAAAACCCACTATCGGTCTTTCACTCTTTACCGCTTTGTCTGGTTCATTCTCTTCTGATAAAACGAAATCCCCTCGCGATTTCGAAAAGGGTGTTGTTGGGTTGGGTATAGTGGCTGCCATGACTGATTCTGACAAAATTCATGAACCTTTTATGTCTTCGAAAGCGGTTTCTCCCAGGTCTTGCTCGATTCCTATTGTTTCTTCTGCTAAACCAGCGGCTAATTTCAGAGGTGGGTTTAACCTAGAAAAAGAACTATTACCTGAGGTCCTTGATGAACTTTCCGAAAGTTACACCTGCGTAACTTCACATTTTGGTAATCGTTTGTTTGAAAAGCGTGTTTACTTTAATGGTGAGCTCGAATTGGTCGATAGCCGCTCTTCAAATGTAGTGAGATCTGGGGTTTTTTCCACTTCCCCCATGAGTTTTGGTGTAGCGGAGAGAGGGTTTTGTGCTGCTGAATTTTTGAGCTCTTGCTATCTCTGCGGCAAGCATCTTCATGGGCTTGACATCTTCATGTACAGAGGGGAAAAGGCATTTTGCAGCGTTGAGTGTCGCGACAAACACATCAGAGGCGACGATTGCAGGGACAAGTGTGGATCGAAGGCCATGAAAGACTACTCGGCATTGCCTTGCTCCGTGGCTGGCCCCCCTGCCTTGGCTTCAGTACTTGTTGTTTCTCTTGTTACTAAGTTCATATTCCCCATGTCTCCACTTGCTTTCGGAGTCACAATCTTCATTGTTCCTCTCTTTACTTATATCATCTCTTCCATGGCCTTCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCTTCCTTGTGCAAGAGATTTGGCTCCATATTCCTCTTAAAACTCGGCTCCAAGAACCTCGTTGTTGTGTCTGATGCCGAGCTTGCTAGCCAAGTTCTCCATGCTCAAGGCGTCGAGTTTGGCTCTCGCCCTCGAAATGTCGTGTTTGATATCTTCACTGGAAATGGTCAAGATATGGTGTTTACCGTTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACATTGCCGTTTTTCACAAACAAAGTGGTGCACAACTACAGTGACATGTGGGAAGATGAGATGGACTCTGTGGTTCGTGACCTTAAGAGTAACAAGAAGTTTCAATCAGAAGGGATAGTCATTAGAAAGCGTTTGCAATTGATGTTGTACAATATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCCCAAGACGATCCTTTGTTCATTGAAGCAACCCGATTCAACTCAGAAAGGAGTCGATTGGCACAAAGCTTTGAGTACAACTATGGAGATTTCATTCCTTTGCTCAGACCCTTCTTGCGAGGTTACTTGAACAAGTGTAGAGGTTTGCAGAGTAGGAGGTTGAACTTTTTCAACAAAAACTATGTTGAGAAAAGAAGGAAGATAATGGCTGCGAATGGAGATAAGCACAAGATAAGTTGTGCCATGGATCATATTATAGACGCTCAATTGAAAGGTGAGATAAGTGAAGAGAATGTGATTTACATCGTGGAGAACATCAACGTGGCTGCTATCGAAACGACATTATGGTCGATGGAATGGGCGATAGCTGAGCTGGTGAATCATCCAGAAATCCAACACAAGATTCGGGAGGAGATTAGTGATGTCCTAAAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAACTACCATACTTGCAAGCAACAGTAAAAGAAACACTAAGGTTGCACACTCCAATTCCATTGTTGGTGCCACATATGAACTTGGAAGAGGCAAAGCTCGGAGGGTACACCATTCCAAAGGAATCTAAGGTGGTAGTGAATGCATGGTGGCTGGCTAATAACCCTGAGTGGTGGAAAAATCCAGAGGAGTTTAGGCCAGAGAGGTTCTTTGAAGAAGAAAGTGGAACAGAGGCTGTTGCTGCAGGAAAAGTGGATTATCGATTCTTACCATTTGGAGTTGGAAGAAGGAGTTGCCCTGGAATTGTTTTGGCAATGCCAATCTTAGGACTCATTGTGGCCAAGTTGGTTTCAAAGTTTGAAATGAAACCTCCTAATGGATTGGAGAAGATTGATGTCGCAGAAAAAGGAGGACAATTCAGCCTGCATATCGCCAACCACTCAACGTCAGACACTTGTAGGTTGCCATCGATCAAGCCACGAGTTGGATTGAGTCGTCCATGTCGCTATCGGTGTACAAGCCAAACCATCTGTGAATCCTCTGTTGTTCGCCACCGTCTGCGTGTCGACCACGTCACTGTCACGCGGATCTTGTTTTCTCTTGGATCTAACCGTTGGTTATCGCGCATTAAGGTTCAATTTTTGGTCACTACTGTGGGTTCGCTACCGCTATCGTTGATGGTCTCCAAAATCTCTATTTTTGGGAATTTCGACTTCGTCAGTGTATTGTTCGTAGAATTTGGAAGCGATTTTAGCAAGATTTTGGCTGGGCTACTTAATAGAAGGTGGAGTGAATTTTGGACTAAGCTACCTTTCGTCACTGTCCTACTGCACAGACTGATATGGTATCTAACACCCACTGTGTCCGATTCCCCTGCCTCAAGTGTTAACTCTCCGGTTCAACAACTAGCTTTACCTAGTCCTCTCACTTCCATTATACCTCAATCCACAAATATTCATCCCATGATCACTCGGTCAAAAGGTGGGATTGTTAAACCTCGAGTTTGGCATGCTCAATACAAAATTCAAATCTCTATTTCCACAGAACCAACCAGCTTTCGCCATGCGGTTAAATGTGCCAAATGGGGAGAAGCTATGGATAAGGAGTATAAGGCTTTTGGTTAG 2886 44.14 MDNFIGKRKPTIGLSLFTALSGSFSSDKTKSPRDFEKGVVGLGIVAAMTDSDKIHEPFMSSKAVSPRSCSIPIVSSAKPAANFRGGFNLEKELLPEVLDELSESYTCVTSHFGNRLFEKRVYFNGELELVDSRSSNVVRSGVFSTSPMSFGVAERGFCAAEFLSSCYLCGKHLHGLDIFMYRGEKAFCSVECRDKHIRGDDCRDKCGSKAMKDYSALPCSVAGPPALASVLVVSLVTKFIFPMSPLAFGVTIFIVPLFTYIISSMAFSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASLCKRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSDMWEDEMDSVVRDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRGLQSRRLNFFNKNYVEKRRKIMAANGDKHKISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEIQHKIREEISDVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGTEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPNGLEKIDVAEKGGQFSLHIANHSTSDTCRLPSIKPRVGLSRPCRYRCTSQTICESSVVRHRLRVDHVTVTRILFSLGSNRWLSRIKVQFLVTTVGSLPLSLMVSKISIFGNFDFVSVLFVEFGSDFSKILAGLLNRRWSEFWTKLPFVTVLLHRLIWYLTPTVSDSPASSVNSPVQQLALPSPLTSIIPQSTNIHPMITRSKGGIVKPRVWHAQYKIQISISTEPTSFRHAVKCAKWGEAMDKEYKAFG 961
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 21902288 21911534 + CmPI595203_11g011550.1 Cmu11g1155 429677
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1155 961 PRINTS P450 superfamily signature 677 686 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS P450 superfamily signature 543 560 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS P450 superfamily signature 595 606 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 253 736 - GO:0004497(PANTHER)
Cmu11g1155 961 FunFam Trans-cinnamate 4-monooxygenase 262 736 - -
Cmu11g1155 961 SUPERFAMILY Cytochrome P450 272 724 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 679 688 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu11g1155 961 Pfam zinc-finger of the FCS-type, C2-C2 159 201 IPR007650 -
Cmu11g1155 961 Gene3D Cytochrome P450 266 739 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 Pfam Cytochrome P450 272 732 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS E-class P450 group I signature 300 319 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS E-class P450 group I signature 419 437 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS E-class P450 group I signature 594 612 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS E-class P450 group I signature 635 659 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS E-class P450 group I signature 686 709 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS E-class P450 group I signature 676 686 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS E-class P450 group I signature 324 345 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS E-class P450 group I signature 532 549 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 PRINTS E-class P450 group I signature 552 578 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1155 961 ProSiteProfiles Zinc finger FLZ-type profile. 161 204 IPR007650 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g2090 Cmu-Chr3:29348109 Cmu11g1155 Cmu-Chr11:21902288 4.20E-17 dispersed
Cmu08g1220 Cmu-Chr8:24597767 Cmu11g1155 Cmu-Chr11:21902288 1.30E-11 dispersed
Cmu11g1155 Cmu-Chr11:21902288 Cmu11g1157 Cmu-Chr11:21923928 6.90E-252 dispersed
Cmu11g1535 Cmu-Chr11:27650865 Cmu11g1155 Cmu-Chr11:21902288 3.40E-07 dispersed
Cmu11g1155 Cmu-Chr11:21902288 Cmu11g1156 Cmu-Chr11:21916410 5.90E-70 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1155 K00487 - csv:105434566 982.245