Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu11g1155 | ATGGACAATTTCATCGGAAAAAGAAAACCCACTATCGGTCTTTCACTCTTTACCGCTTTGTCTGGTTCATTCTCTTCTGATAAAACGAAATCCCCTCGCGATTTCGAAAAGGGTGTTGTTGGGTTGGGTATAGTGGCTGCCATGACTGATTCTGACAAAATTCATGAACCTTTTATGTCTTCGAAAGCGGTTTCTCCCAGGTCTTGCTCGATTCCTATTGTTTCTTCTGCTAAACCAGCGGCTAATTTCAGAGGTGGGTTTAACCTAGAAAAAGAACTATTACCTGAGGTCCTTGATGAACTTTCCGAAAGTTACACCTGCGTAACTTCACATTTTGGTAATCGTTTGTTTGAAAAGCGTGTTTACTTTAATGGTGAGCTCGAATTGGTCGATAGCCGCTCTTCAAATGTAGTGAGATCTGGGGTTTTTTCCACTTCCCCCATGAGTTTTGGTGTAGCGGAGAGAGGGTTTTGTGCTGCTGAATTTTTGAGCTCTTGCTATCTCTGCGGCAAGCATCTTCATGGGCTTGACATCTTCATGTACAGAGGGGAAAAGGCATTTTGCAGCGTTGAGTGTCGCGACAAACACATCAGAGGCGACGATTGCAGGGACAAGTGTGGATCGAAGGCCATGAAAGACTACTCGGCATTGCCTTGCTCCGTGGCTGGCCCCCCTGCCTTGGCTTCAGTACTTGTTGTTTCTCTTGTTACTAAGTTCATATTCCCCATGTCTCCACTTGCTTTCGGAGTCACAATCTTCATTGTTCCTCTCTTTACTTATATCATCTCTTCCATGGCCTTCTCCTCCAAGCTTCCTCCTGGCCCTCTCTCCATTCCCATCTTTGGCAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCTTCCTTGTGCAAGAGATTTGGCTCCATATTCCTCTTAAAACTCGGCTCCAAGAACCTCGTTGTTGTGTCTGATGCCGAGCTTGCTAGCCAAGTTCTCCATGCTCAAGGCGTCGAGTTTGGCTCTCGCCCTCGAAATGTCGTGTTTGATATCTTCACTGGAAATGGTCAAGATATGGTGTTTACCGTTTATGGAGACCATTGGCGTAAGATGCGTAGAATCATGACATTGCCGTTTTTCACAAACAAAGTGGTGCACAACTACAGTGACATGTGGGAAGATGAGATGGACTCTGTGGTTCGTGACCTTAAGAGTAACAAGAAGTTTCAATCAGAAGGGATAGTCATTAGAAAGCGTTTGCAATTGATGTTGTACAATATCATGTATAGAATGATGTTTGATGCAAAGTTTGAGTCCCAAGACGATCCTTTGTTCATTGAAGCAACCCGATTCAACTCAGAAAGGAGTCGATTGGCACAAAGCTTTGAGTACAACTATGGAGATTTCATTCCTTTGCTCAGACCCTTCTTGCGAGGTTACTTGAACAAGTGTAGAGGTTTGCAGAGTAGGAGGTTGAACTTTTTCAACAAAAACTATGTTGAGAAAAGAAGGAAGATAATGGCTGCGAATGGAGATAAGCACAAGATAAGTTGTGCCATGGATCATATTATAGACGCTCAATTGAAAGGTGAGATAAGTGAAGAGAATGTGATTTACATCGTGGAGAACATCAACGTGGCTGCTATCGAAACGACATTATGGTCGATGGAATGGGCGATAGCTGAGCTGGTGAATCATCCAGAAATCCAACACAAGATTCGGGAGGAGATTAGTGATGTCCTAAAAGGAAAGGAAGTGACTGAATCTAACCTTCATGAACTACCATACTTGCAAGCAACAGTAAAAGAAACACTAAGGTTGCACACTCCAATTCCATTGTTGGTGCCACATATGAACTTGGAAGAGGCAAAGCTCGGAGGGTACACCATTCCAAAGGAATCTAAGGTGGTAGTGAATGCATGGTGGCTGGCTAATAACCCTGAGTGGTGGAAAAATCCAGAGGAGTTTAGGCCAGAGAGGTTCTTTGAAGAAGAAAGTGGAACAGAGGCTGTTGCTGCAGGAAAAGTGGATTATCGATTCTTACCATTTGGAGTTGGAAGAAGGAGTTGCCCTGGAATTGTTTTGGCAATGCCAATCTTAGGACTCATTGTGGCCAAGTTGGTTTCAAAGTTTGAAATGAAACCTCCTAATGGATTGGAGAAGATTGATGTCGCAGAAAAAGGAGGACAATTCAGCCTGCATATCGCCAACCACTCAACGTCAGACACTTGTAGGTTGCCATCGATCAAGCCACGAGTTGGATTGAGTCGTCCATGTCGCTATCGGTGTACAAGCCAAACCATCTGTGAATCCTCTGTTGTTCGCCACCGTCTGCGTGTCGACCACGTCACTGTCACGCGGATCTTGTTTTCTCTTGGATCTAACCGTTGGTTATCGCGCATTAAGGTTCAATTTTTGGTCACTACTGTGGGTTCGCTACCGCTATCGTTGATGGTCTCCAAAATCTCTATTTTTGGGAATTTCGACTTCGTCAGTGTATTGTTCGTAGAATTTGGAAGCGATTTTAGCAAGATTTTGGCTGGGCTACTTAATAGAAGGTGGAGTGAATTTTGGACTAAGCTACCTTTCGTCACTGTCCTACTGCACAGACTGATATGGTATCTAACACCCACTGTGTCCGATTCCCCTGCCTCAAGTGTTAACTCTCCGGTTCAACAACTAGCTTTACCTAGTCCTCTCACTTCCATTATACCTCAATCCACAAATATTCATCCCATGATCACTCGGTCAAAAGGTGGGATTGTTAAACCTCGAGTTTGGCATGCTCAATACAAAATTCAAATCTCTATTTCCACAGAACCAACCAGCTTTCGCCATGCGGTTAAATGTGCCAAATGGGGAGAAGCTATGGATAAGGAGTATAAGGCTTTTGGTTAG | 2886 | 44.14 | MDNFIGKRKPTIGLSLFTALSGSFSSDKTKSPRDFEKGVVGLGIVAAMTDSDKIHEPFMSSKAVSPRSCSIPIVSSAKPAANFRGGFNLEKELLPEVLDELSESYTCVTSHFGNRLFEKRVYFNGELELVDSRSSNVVRSGVFSTSPMSFGVAERGFCAAEFLSSCYLCGKHLHGLDIFMYRGEKAFCSVECRDKHIRGDDCRDKCGSKAMKDYSALPCSVAGPPALASVLVVSLVTKFIFPMSPLAFGVTIFIVPLFTYIISSMAFSSKLPPGPLSIPIFGNWLQVGNDLNHRLLASLCKRFGSIFLLKLGSKNLVVVSDAELASQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSDMWEDEMDSVVRDLKSNKKFQSEGIVIRKRLQLMLYNIMYRMMFDAKFESQDDPLFIEATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCRGLQSRRLNFFNKNYVEKRRKIMAANGDKHKISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPEIQHKIREEISDVLKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPEWWKNPEEFRPERFFEEESGTEAVAAGKVDYRFLPFGVGRRSCPGIVLAMPILGLIVAKLVSKFEMKPPNGLEKIDVAEKGGQFSLHIANHSTSDTCRLPSIKPRVGLSRPCRYRCTSQTICESSVVRHRLRVDHVTVTRILFSLGSNRWLSRIKVQFLVTTVGSLPLSLMVSKISIFGNFDFVSVLFVEFGSDFSKILAGLLNRRWSEFWTKLPFVTVLLHRLIWYLTPTVSDSPASSVNSPVQQLALPSPLTSIIPQSTNIHPMITRSKGGIVKPRVWHAQYKIQISISTEPTSFRHAVKCAKWGEAMDKEYKAFG | 961 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 21902288 | 21911534 | + | CmPI595203_11g011550.1 | Cmu11g1155 | 429677 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu11g1155 | 961 | PRINTS | P450 superfamily signature | 677 | 686 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | P450 superfamily signature | 543 | 560 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | P450 superfamily signature | 595 | 606 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PANTHER | TRANS-CINNAMATE 4-MONOOXYGENASE | 253 | 736 | - | GO:0004497(PANTHER) | |
| Cmu11g1155 | 961 | FunFam | Trans-cinnamate 4-monooxygenase | 262 | 736 | - | - | |
| Cmu11g1155 | 961 | SUPERFAMILY | Cytochrome P450 | 272 | 724 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 679 | 688 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cmu11g1155 | 961 | Pfam | zinc-finger of the FCS-type, C2-C2 | 159 | 201 | IPR007650 | - | |
| Cmu11g1155 | 961 | Gene3D | Cytochrome P450 | 266 | 739 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | Pfam | Cytochrome P450 | 272 | 732 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | E-class P450 group I signature | 300 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | E-class P450 group I signature | 419 | 437 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | E-class P450 group I signature | 594 | 612 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | E-class P450 group I signature | 635 | 659 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | E-class P450 group I signature | 686 | 709 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | E-class P450 group I signature | 676 | 686 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | E-class P450 group I signature | 324 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | E-class P450 group I signature | 532 | 549 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | PRINTS | E-class P450 group I signature | 552 | 578 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cmu11g1155 | 961 | ProSiteProfiles | Zinc finger FLZ-type profile. | 161 | 204 | IPR007650 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu03g2090 | Cmu-Chr3:29348109 | Cmu11g1155 | Cmu-Chr11:21902288 | 4.20E-17 | dispersed | |
| Cmu08g1220 | Cmu-Chr8:24597767 | Cmu11g1155 | Cmu-Chr11:21902288 | 1.30E-11 | dispersed | |
| Cmu11g1155 | Cmu-Chr11:21902288 | Cmu11g1157 | Cmu-Chr11:21923928 | 6.90E-252 | dispersed | |
| Cmu11g1535 | Cmu-Chr11:27650865 | Cmu11g1155 | Cmu-Chr11:21902288 | 3.40E-07 | dispersed | |
| Cmu11g1155 | Cmu-Chr11:21902288 | Cmu11g1156 | Cmu-Chr11:21916410 | 5.90E-70 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu11g1155 | K00487 | - | csv:105434566 | 982.245 |