Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1157 ATGGGGCATTCTGCAGAAAAGTTTGGTTTCCTTTGCTCAGTCTCTTCACTAGCTTTGGGGTTGATCACCAAGTTCATTTTCCCCAGTTTATTCTTGTCCATTTCCCCAAACATCCTTCCAATCACTCTTTTCATTGCAGTTGTTTTTGCTTTCACCTTCTTTGGCTTATCCAATTTCTCCAAAAATCCTCCAGGTCCTCTCCCTGTTCCCATCTTTGGGAATTGGCTCCAAGTTGGCAATGATCTCAACCATCGCCTTCTTGCTTCTTTGTCACAAAAATATGGTTCTGTCTTCCGACTCAAACTTGGTTACAAGAATCTAGTTGTGGTGTCTGATGCCGAGCTTGCTAACCAAGTCCTCCATGCTCAAGGTGTGGAGTTTGGATCTCGTCCACGAAATGTTGTCTTCGACATTTTCACTGGTAATGGACAGGATATGGTGTTCACCGTTTATGGCAACCATTGGCGTAAAATGCGTAGAATTATGACACTGCCGTTTTTTACAAACAAAGTTGTGCATAACTACAGTGGCATGTGGGAGGAAGAAATGGATTTAGTTGTTCATGATCTTATGAATAACCCAAAGGTAAAATCTGAAGGGTTAGTCATAAGAAAGCGTTTACAACTGATGTTGTACAATATCATGTATAGAATGATGTTTGATACTAAATTTGAATCTCAAGATGATCCTTTGTTTATTGAGGCAACTAAATTCAATTCTGAAAGAAGTCGATTGGCACAAAGTTTTGAATACAATTATGGAGATTTCATTCCTCTGCTTAGACCCTTTTTGAGGAGTTACTTGAACAAATGCAAGGATTTGCAAAGCAGGAGGTTGGCATTTTTCAACAACAACTATGTTGAGAAAAGAAGAAAAATTATGACTGCCAATGGAGACAAGCACAGGATAAGTTGTGCTATGGATCATATTATAGATGCTCAGCTAAAAGGAGAAATTAGTGAAGAGAATGTGATATACATTGTGGAAAATATTAATGTTGCAGCAATAGAGACGACACTTTGGTCGATGGAGTGGGCAATAGCTGAGTTGGTAAACCATCAAACTGTACAACAAAATATCCGAGAGGAAATCTCAACCATCCTAAAAGGAAAGGAAGTCACAGAATCTAACTTACATGAGCTGCCATATCTGCAAGCCACAGTGAAAGAGACATTGAGACTGCACACACCAATACCTTTATTAGTTCCACATATGAACTTGGAAGAAGCCAAGCTTGGAGGCTACACAATTCCAAAAGAGTCTAAGGTGGTGGTAAATGCATGGTGGTTGGCCAATAACCCAGCATGGTGGAAAAATCCAGAGGAATTCAGGCCAGAGAGGTTCCTTCAAGAAGAAAGTAGCACAGAAGCTGTAGCAGGAGGCAAAGTTGACTTCCGATTCTTACCATTTGGTGTTGGAAGGAGAAGTTGCCCTGGAATTGTTTTGGCGCTGCCAATCTTGGGATTGATCATTGCTAAGTTGGTGACAAATTTTGAAATGAAGCCTCCAATTGGCATGGAGAAGATTGATGTGAGCGAAAAAGGAGGACAATTCAGTTTACATATTGCCAACCACTCAACTGTGGCATTCAAACCTATAACTGCTTAG 1608 40.36 MGHSAEKFGFLCSVSSLALGLITKFIFPSLFLSISPNILPITLFIAVVFAFTFFGLSNFSKNPPGPLPVPIFGNWLQVGNDLNHRLLASLSQKYGSVFRLKLGYKNLVVVSDAELANQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGNHWRKMRRIMTLPFFTNKVVHNYSGMWEEEMDLVVHDLMNNPKVKSEGLVIRKRLQLMLYNIMYRMMFDTKFESQDDPLFIEATKFNSERSRLAQSFEYNYGDFIPLLRPFLRSYLNKCKDLQSRRLAFFNNNYVEKRRKIMTANGDKHRISCAMDHIIDAQLKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHQTVQQNIREEISTILKGKEVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGGYTIPKESKVVVNAWWLANNPAWWKNPEEFRPERFLQEESSTEAVAGGKVDFRFLPFGVGRRSCPGIVLALPILGLIIAKLVTNFEMKPPIGMEKIDVSEKGGQFSLHIANHSTVAFKPITA 535
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21923928 21925679 + CmPI595203_11g011570.1 Cmu11g1157 429679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1157 535 Gene3D Cytochrome P450 57 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 42 534 - GO:0004497(PANTHER)
Cmu11g1157 535 PRINTS E-class P450 group I signature 385 403 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PRINTS E-class P450 group I signature 477 500 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PRINTS E-class P450 group I signature 467 477 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 FunFam Trans-cinnamate 4-monooxygenase 56 527 - -
Cmu11g1157 535 Pfam Cytochrome P450 63 523 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 470 479 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu11g1157 535 PRINTS P450 superfamily signature 386 397 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PRINTS P450 superfamily signature 468 477 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu11g1157 535 SUPERFAMILY Cytochrome P450 63 515 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g1898 Cmu-Chr2:32901651 Cmu11g1157 Cmu-Chr11:21923928 7.60E-194 dispersed
Cmu03g0631 Cmu-Chr3:561755 Cmu11g1157 Cmu-Chr11:21923928 7.40E-181 dispersed
Cmu11g1155 Cmu-Chr11:21902288 Cmu11g1157 Cmu-Chr11:21923928 6.90E-252 dispersed
Cmu11g1157 Cmu-Chr11:21923928 Cmu03g0926 Cmu-Chr3:3925718 7.60E-59 dispersed
Cmu11g1156 Cmu-Chr11:21916410 Cmu11g1157 Cmu-Chr11:21923928 2.00E-49 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1157 K00487 - csv:101205775 1009.59