Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g1166 | ATGCCATCGCTTAAGGGCTCTCCGTACGCTAGACGGAGTGATGTGGAGTCCGGTAGCAGCAATTCCGGCGACGCGGAGGAGGAGGATTTATCTAATCCTTTTGAAATTCACACCACTAAGCATGCTTCTGTTGACAGACTCCGCCGCTGGAGACAAGCTGCGCTAGTGTTAAATGCTTCTCGTCGTTTTCGGTATACTTTAGACTTGAAAAAGGAAGAAGAGAAGAAAGAAGCTTTGAGAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCGTATCTCTTTAAAGAGGCTGGGGATCGTGTAACAGGACCAGGGCCTGCAGCAGCAGAAGCTCCAAATGGTGATTTTTCAGTTGGACCAGAGCAACTGGCTGTGTTGGTTAAGGATCGTAATGTTGAAGCTCTGGAGCAGTATGGAGGGGTTAAAGGGGTAGCAGATATGTTACAATCAAATTTAGAGAAGGGGATAATTGGTGATGATTCTGATTTATTGAAACGGAGAAACACATATGGTTCAAACACATATCCCCAGAAACCGGGAAGGAGTTTTTGGAGGTTTCTCTGGGAAGCTTGGCAAGATCTTACATTGATCATATTGATGATAGCTGCTGTTGCTTCGTTGGTGCTAGGCATAAAGACTGAGGGAATCAAGGAAGGCTGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTCATTGTCGTAACAGCTATTAGTGACTATCGACAATCTCTTCAATTTCAGAACTTGAATAAGGAGAAGAGGAACATACAAGTGGAGGTCGTTAGGGGTGGCCGTCGAATTGAGGTCTCAATTTATGACATCGTTGTTGGTGATGTTATACCGCTCAATATTGGTGATCAGGTCCCTGCTGATGGCATCCTAATTTCTGGACACTCACTTGCTATTGATGAATCAAGCATGACTGGAGAGAGCAAGATTGTTCAAAAGCATGGTAAGGAACCATTCCTGATGTCTGGATGCAAAGTAGCTGATGGTAGTGGCACCATGCTGGTTACAAGTGTTGGAGTTAATACTGAATGGGGTTTGCTTATGGCAAGTATTTCTGAAGACAACGGCGAGGAAACTCCTTTGCAGGTGCGTTTAAATGGTGTGGCAACTTTAATTGGTATTGTTGGACTCACAGTAGCTTTTGCTGTCTTGATTGTGCTCCTTACAAGGTATTTCACTGGTCACACCAAAAATCCAGATGGAAGCCGTCAGTTTATTCCAGGCCAGACAAAAGTTGGTCGTGCCGTTGACGGGGCCATCAAAATTGTCACTATTGCGGTGACCATTGTTGTGGTTGCTGTGCCAGAAGGGCTTCCACTAGCTGTAACCTTAACTCTTGCTTACTCAATGAGAAAGATGATGGCAGACAAGGCATTGGTGCGGAGGCTATCAGCATGTGAGACGATGGGGTCTGCTACAACTATTTGTAGTGATAAGACTGGAACCTTAACTTTAAATCAGATGACCATTGTTGAGGCTTATGCTGGTGGAAAGAAGATTGATCCGCCAGAGAAGAAGTCAGAGTTGTCTCCTATGTTACACTCTACACTTATTGAAGGCATTGCTCTAAACTCAAATGGCAGTGTATATATGCCTGAGAGTGGTGGAGAGGTGGAGGTTACAGGATCACCAACAGAGAAGGCTATTCTTAATTGGGGTATCAAGCTGGGAATGAACTTTGAAGCACTTCGATCAGAATCTGCAATTCTTCACGTCTTCCCCTTCAGCTCAGATAAAAAACGTGGTGGTGTTGCAGGTCAACGGGATGATCAAGTCCGTGTACACTGGAAAGGTGCTGCTGAGATAGTCTTAGCATCGTGCACACAGTATATGGATGAACATGATCAATCTGTTCAATTAGATGAAGATAAGATGAAGTATTTTAAAAGGGCTATCGAAGATATGGCTTCACGTAGTTTACGTTGTGTTGCAATTGCATATAGACCTGTTGAACCTGAGAATGTTCCTGATGGCGAAGAACAATTGAGTAAGTGGGCTCTACCAGAAGACGACCTTGTGTTGTTGGCTATAGTTGGTTTGAAGGACCCCTGCCGACCAGGAGTGAAAGATGCAGTACGACTTTGCCAAAAGGCTGGTGTTAAGGTGCGCATGGTCACTGGTGATAATGTTCAAACTGCTAGAGCTATTGCATTGGAATGTGGAATACTTGGTTCAGATTCAGATGCTACTGAACCAAATCTTATTGAAGGAAAAGTATTCCGTGCCCTATCTGATGCCCAAAGAGAAGAAGTTGCTGAGAAAATATCAGTGATGGGCCGATCCTCCCCCAATGATAAGCTTCTCCTTGTGCAAGCGTTGAGAAAGAAAGGACATGTAGTTGCTGTTACTGGAGATGGTACAAATGATGCTCCTGCATTGCATGAGGCAGATATTGGCCTTGCAATGGGAATTCAGGGGACAGAAGTTGCCAAAGAAAGCTCCGATATTATTATTTTAGATGACAACTTTGCTTCTGTTGTGAAGGTTGTAAGGTGGGGCCGATCAGTATATGCAAATATTCAGAAATTCATTCAGTTTCAGCTTACTGTTAATGTTGCAGCACTCATTATAAATGTCGTGGCAGCAGTATCCTCTGGTGATGTCCCACTAAATGCTGTGCAGCTTTTGTGGGTTAATCTTATCATGGACACTCTCGGAGCATTAGCTTTGGCTACTGAACCACCAACCAATCACCTTATGGACAGATCGCCAGTTGGTAGAAGAGAACCTCTCATAACAAATATTATGTGGAGGAACCTCCTGATACAGGCATTTTATCAAGTCACTGTGTTGCTCGTCCTCAATTTTCGTGGTCGGAGTTTGCTTCATTTGAACCACTCTAATTTAGAAGCTATCAAAGTGAAGAATACATTGATTTTCAATGCATTTGTACTTTGTCAAATTTTCAATGAGTTTAATGCTCGAAAACCTGATGAGAAGAATATATTCAAAGGAGTCACTAAAAATTATCTCTTCATCGGGATCATTGCAATTACTGTCATCCTCCAGGTGATAATAATCGAGTTTCTTGGGAAATTCACATCCACGGTAAGGCTAAATTGGAAATATTGGATTATTTCCATAATCATTGGCGTTATCAGTTGGCCTCTTGCTCTTCTTGGGAAATTCATACCTGTTCCTGAAACTCCCTTCCATGTGCTCATTATCAGAATGTTCCGTAAACGACAACCTGGGGGAGTTTTTAGGACCCTGAGCAACACTCACCTTGACGCTGAGATGGCATATTGTGGGAATTGTTTTTTTGTGCTTCTAAAGGGCAATCGTTCTGAGGGATCGTAA | 3318 | 43.25 | MPSLKGSPYARRSDVESGSSNSGDAEEEDLSNPFEIHTTKHASVDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALRKIRAHAQAIRAAYLFKEAGDRVTGPGPAAAEAPNGDFSVGPEQLAVLVKDRNVEALEQYGGVKGVADMLQSNLEKGIIGDDSDLLKRRNTYGSNTYPQKPGRSFWRFLWEAWQDLTLIILMIAAVASLVLGIKTEGIKEGWYDGGSIAFAVILVIVVTAISDYRQSLQFQNLNKEKRNIQVEVVRGGRRIEVSIYDIVVGDVIPLNIGDQVPADGILISGHSLAIDESSMTGESKIVQKHGKEPFLMSGCKVADGSGTMLVTSVGVNTEWGLLMASISEDNGEETPLQVRLNGVATLIGIVGLTVAFAVLIVLLTRYFTGHTKNPDGSRQFIPGQTKVGRAVDGAIKIVTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTIVEAYAGGKKIDPPEKKSELSPMLHSTLIEGIALNSNGSVYMPESGGEVEVTGSPTEKAILNWGIKLGMNFEALRSESAILHVFPFSSDKKRGGVAGQRDDQVRVHWKGAAEIVLASCTQYMDEHDQSVQLDEDKMKYFKRAIEDMASRSLRCVAIAYRPVEPENVPDGEEQLSKWALPEDDLVLLAIVGLKDPCRPGVKDAVRLCQKAGVKVRMVTGDNVQTARAIALECGILGSDSDATEPNLIEGKVFRALSDAQREEVAEKISVMGRSSPNDKLLLVQALRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSSGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRSPVGRREPLITNIMWRNLLIQAFYQVTVLLVLNFRGRSLLHLNHSNLEAIKVKNTLIFNAFVLCQIFNEFNARKPDEKNIFKGVTKNYLFIGIIAITVILQVIIIEFLGKFTSTVRLNWKYWIISIIIGVISWPLALLGKFIPVPETPFHVLIIRMFRKRQPGGVFRTLSNTHLDAEMAYCGNCFFVLLKGNRSEGS | 1105 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 22254297 | 22274820 | - | CmPI595203_11g011660.1 | Cmu11g1166 | 429688 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g1166 | 1105 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 484 | 490 | IPR018303 | - | |
Cmu11g1166 | 1105 | Gene3D | - | 164 | 358 | - | - | |
Cmu11g1166 | 1105 | PANTHER | CATION TRANSPORTING ATPASE | 91 | 1052 | - | GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER) | |
Cmu11g1166 | 1105 | FunFam | Calcium-transporting ATPase | 42 | 98 | - | - | |
Cmu11g1166 | 1105 | Gene3D | - | 42 | 98 | - | - | |
Cmu11g1166 | 1105 | Gene3D | - | 492 | 689 | IPR023299 | GO:0000166(InterPro) | |
Cmu11g1166 | 1105 | SMART | Cation_ATPase_N_a_2 | 138 | 212 | IPR004014 | - | |
Cmu11g1166 | 1105 | FunFam | Calcium-transporting ATPase | 190 | 247 | - | - | |
Cmu11g1166 | 1105 | FunFam | Calcium-transporting ATPase | 683 | 834 | - | - | |
Cmu11g1166 | 1105 | NCBIfam | HAD-IC family P-type ATPase | 756 | 869 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cmu11g1166 | 1105 | NCBIfam | HAD-IC family P-type ATPase | 227 | 399 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cmu11g1166 | 1105 | NCBIfam | HAD-IC family P-type ATPase | 422 | 505 | IPR001757 | GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro) | |
Cmu11g1166 | 1105 | Pfam | Cation transporting ATPase, C-terminus | 874 | 1050 | IPR006068 | - | |
Cmu11g1166 | 1105 | Pfam | haloacid dehalogenase-like hydrolase | 480 | 803 | - | - | |
Cmu11g1166 | 1105 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 139 | 1052 | IPR023298 | - | |
Cmu11g1166 | 1105 | FunFam | Calcium-transporting ATPase 9 plasma membrane-type | 336 | 506 | - | - | |
Cmu11g1166 | 1105 | CDD | P-type_ATPase_Ca_PMCA-like | 164 | 922 | - | - | |
Cmu11g1166 | 1105 | FunFam | Calcium-transporting ATPase | 237 | 358 | - | - | |
Cmu11g1166 | 1105 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Cmu11g1166 | 1105 | Pfam | Cation transporter/ATPase, N-terminus | 139 | 207 | IPR004014 | - | |
Cmu11g1166 | 1105 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 31 | 74 | IPR024750 | GO:0005516(InterPro) | |
Cmu11g1166 | 1105 | Pfam | E1-E2 ATPase | 259 | 460 | - | - | |
Cmu11g1166 | 1105 | SFLD | Haloacid Dehalogenase | 464 | 841 | - | - | |
Cmu11g1166 | 1105 | PRINTS | Sodium/potassium-transporting ATPase signature | 600 | 618 | - | - | |
Cmu11g1166 | 1105 | PRINTS | Sodium/potassium-transporting ATPase signature | 225 | 245 | - | - | |
Cmu11g1166 | 1105 | PRINTS | Sodium/potassium-transporting ATPase signature | 475 | 496 | - | - | |
Cmu11g1166 | 1105 | Gene3D | - | 479 | 834 | IPR023214 | - | |
Cmu11g1166 | 1105 | FunFam | Calcium-transporting ATPase | 492 | 689 | - | - | |
Cmu11g1166 | 1105 | PRINTS | P-type cation-transporting ATPase superfamily signature | 482 | 496 | - | - | |
Cmu11g1166 | 1105 | PRINTS | P-type cation-transporting ATPase superfamily signature | 813 | 825 | - | - | |
Cmu11g1166 | 1105 | PRINTS | P-type cation-transporting ATPase superfamily signature | 789 | 808 | - | - | |
Cmu11g1166 | 1105 | PRINTS | P-type cation-transporting ATPase superfamily signature | 682 | 693 | - | - | |
Cmu11g1166 | 1105 | PRINTS | P-type cation-transporting ATPase superfamily signature | 306 | 320 | - | - | |
Cmu11g1166 | 1105 | PRINTS | P-type cation-transporting ATPase superfamily signature | 704 | 714 | - | - | |
Cmu11g1166 | 1105 | SFLD | p-type atpase | 464 | 841 | IPR044492 | - | |
Cmu11g1166 | 1105 | MobiDBLite | consensus disorder prediction | 13 | 27 | - | - | |
Cmu11g1166 | 1105 | Gene3D | - | 190 | 1041 | - | - | |
Cmu11g1166 | 1105 | SUPERFAMILY | Calcium ATPase, transduction domain A | 259 | 355 | IPR008250 | - | |
Cmu11g1166 | 1105 | Coils | Coil | 69 | 89 | - | - | |
Cmu11g1166 | 1105 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 489 | 686 | IPR023299 | GO:0000166(InterPro) | |
Cmu11g1166 | 1105 | NCBIfam | calcium-translocating P-type ATPase, PMCA-type | 132 | 1052 | IPR006408 | GO:0005388(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0070588(InterPro) | |
Cmu11g1166 | 1105 | SUPERFAMILY | HAD-like | 480 | 894 | IPR036412 | - | |
Cmu11g1166 | 1105 | FunFam | Calcium-transporting ATPase | 806 | 1054 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g1647 | Cmu-Chr2:30313471 | Cmu11g1166 | Cmu-Chr11:22254297 | 2.00E-286 | dispersed | |
Cmu03g0800 | Cmu-Chr3:2248870 | Cmu11g1166 | Cmu-Chr11:22254297 | 2.60E-98 | dispersed | |
Cmu09g0151 | Cmu-Chr9:1665535 | Cmu11g1166 | Cmu-Chr11:22254297 | 0.00E+00 | dispersed | |
Cmu10g2319 | Cmu-Chr10:29444762 | Cmu11g1166 | Cmu-Chr11:22254297 | 1.50E-265 | dispersed | |
Cmu11g1166 | Cmu-Chr11:22254297 | Cmu11g1213 | Cmu-Chr11:23652328 | 4.60E-42 | dispersed | |
Cmu11g1166 | Cmu-Chr11:22254297 | Cmu09g0708 | Cmu-Chr9:6660862 | 2.30E-291 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g1166 | K01537 | - | csv:101211703 | 1938.7 |