Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1195 ATGGACTTTGTCCAGATCTTGTGGATTTCTGAAAGTACCTTCTTGACATTGGAGACAATGGTGGTGCATTTCCAGCACACTTTTCTTGTGTTCTTGGCGATTCTTGTTGTTGGGAAGGCAGAAATTTACATTGTCACTATTGAAGGAGAACCTATTGTAAGTTACAAAGGTGATCTGGATGGGTTTGAAGCTACAGCAATGGAATCTGATGAAAAGATCGACCCTACCAGTGAAATTGTGACATCCTATGCTCGTCACCTCGAAAATAAACATGACATGCTTCTTGGGATGTTGTTTGAGAGAGGATCCTTCAAGAAGCTCTATAGTTATAAGCATCTCATCAATGGATTTGCTGTTGACATCACACATGAACAGGCAGAGATTCTAAGACATACACCAATTGTAAAATCTGTCGAGAGGGACTGGAAGGTTAGAAAACTAACAACACACACACCAGAGTTTTTGGGCCTTCCAACTGGCGTATGGCCAACCGGTGGTGGCTTTGACAGGGCTGGAGAAGACATTGTGATTGGATTTGTGGACTCTGGGATTTCTCCACACCATCCAAGTTTTGCAACATATAATACTGAACCTTTTGGGCCGTGTTTGAAGTATAAAGGGAAATGCGAAGTTGACCCTGACACTAAGAAGGATTTCTGTAATGGAAAGATTGTTGGAGCCCAACATTTTGCAGAAGCTGCTAAAGCAGCTGGGGCATTTGATCCAGCTATTCATTTTGCATCTCCTTTGGATGGTGACGGACATGGAAGCCATACAGCAGCAATTGCAGCTGGAAATAATGGAATCCCTGTGAGAATGCATGGCTATGAATTTGGGAAAGCAAGTGGGATGGCTCCTCGTGCTAGAATTGCTGTATATAAAGCTCTCTACAGAATATTTGGAGGATTTGTTGCTGATGTAGTCGCAGCCATTGATCAGGCTGTACATGATGGGGTGGACATTCTCAGTCTTTCAGTGGGGCCAAATAGTCCTCCTGCAACTACCAAGATCACATATTTAAACCCTTTTGATGCGACCCTTCTTTCAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAATGGAGGTCCATTTCCTAAAACTTTGGTGTCATATAGTCCATGGATTGCAACTGTGGCAGCTGCAATTGATGACAGGAGATACAAAAATCATCTGACACTTGGCAATGGAAAAATTCTGGCTGGACTTGGGCTATCACCTGCTACACATTTAAATCGAACATACACATTGGTCGCGGCTAATGATGTTCTGTTAGATTCTTCGGTTATGAAGTACAGCCCTTCAGACTGCCAAAAGCCTGAAGTTCTAAACAAACGCTTGGTTGAAGGAAAAGTACTTCTATGTGGTTATTCATTCAGTTTTGTTGTTGGTACCGCTTCAATTAAGAAGGTCTCTCAAACAGCAAAAGCCCTTGGGGCAGCTGGCTTTGTTCTTGCTGTTGAAAACATTTCTCCGGGAGCAAAATTTGACCCTGTTCCTGTTGGCATTCCTGGAATTCTTATAACTGATGTCAGCAAGTCCATGGATCTTATAGACTACTACAACACCTCTACACCCAGAGACTGGACGGGTCGGGTCAAGAGCTTTGATGCTGTGGGTAGCATTGGGGATGGTTTGATGCCTTTATTATACAAATCAGCTCCTGAGGTAGCATTGTTTTCTGCTCGTGGGCCCAATATTAGAGATTTTAGTTTTCAGGAGGCAGACCTTCTCAAACCAGATATTCTAGCTCCTGGTTCTTTGATTTGGGCTGCTTGGTCTCCAAATGGGACGGACGAGCCGAACTATGTTGGAGAGGGATTTGCTATGATTTCTGGAACTAGTATGGCAGCACCACATATAGCTGGTATAGCAGCTCTTGTAAAACAGAAGCATCCAAACTGGAGTCCTGCAGCCATTAAATCGGCTTTAATGACAACATCAACAACAATGGACAGAGGAGGAAGACCTCTTAAAGCACAACAATTTTCTGAAACAGAAGCCATGAAATTGGTAACTGCAACACCTTTTGATTATGGGAGTGGTCATGTAAACCCAAGAGCAGCACTGGATCCGGGGCTCATCTTTGATGCAGGTTATGAAGATTACTTGGGATTCTTGTGCACAACGGCAGGCATCAACGTTCACGAGATACATAACTATACAAACTCACCTTGCAACTTCACCATGGGACATCCCTGGAATCTCAACAGCCCATCAATCACCATCGCCCATCTCGTGGGAAGTCAAACCGTTACTCGCACAGTAACAAATGTAGCTGAAGAAGAAACCTATACAATTACTGCAAGAATGGACCCTGCTGTTGCCATAGAAGTGAATCCTCCAGCAATGACTTTACGATCCGGTTCATCAAGAAAATTTTCGGTAACTCTCACAGCTCGATCACTGACAGGAACATATAGTTTCGGCCAGGTTCTATTGAAGGGCAGTAGAGGACACAAGGTTAGAATACCTGTAGTAGCCATGGGATACCAACGATGA 2508 43.78 MDFVQILWISESTFLTLETMVVHFQHTFLVFLAILVVGKAEIYIVTIEGEPIVSYKGDLDGFEATAMESDEKIDPTSEIVTSYARHLENKHDMLLGMLFERGSFKKLYSYKHLINGFAVDITHEQAEILRHTPIVKSVERDWKVRKLTTHTPEFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGISPHHPSFATYNTEPFGPCLKYKGKCEVDPDTKKDFCNGKIVGAQHFAEAAKAAGAFDPAIHFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARIAVYKALYRIFGGFVADVVAAIDQAVHDGVDILSLSVGPNSPPATTKITYLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLVSYSPWIATVAAAIDDRRYKNHLTLGNGKILAGLGLSPATHLNRTYTLVAANDVLLDSSVMKYSPSDCQKPEVLNKRLVEGKVLLCGYSFSFVVGTASIKKVSQTAKALGAAGFVLAVENISPGAKFDPVPVGIPGILITDVSKSMDLIDYYNTSTPRDWTGRVKSFDAVGSIGDGLMPLLYKSAPEVALFSARGPNIRDFSFQEADLLKPDILAPGSLIWAAWSPNGTDEPNYVGEGFAMISGTSMAAPHIAGIAALVKQKHPNWSPAAIKSALMTTSTTMDRGGRPLKAQQFSETEAMKLVTATPFDYGSGHVNPRAALDPGLIFDAGYEDYLGFLCTTAGINVHEIHNYTNSPCNFTMGHPWNLNSPSITIAHLVGSQTVTRTVTNVAEEETYTITARMDPAVAIEVNPPAMTLRSGSSRKFSVTLTARSLTGTYSFGQVLLKGSRGHKVRIPVVAMGYQR 835
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 23258692 23265123 + CmPI595203_11g011950.1 Cmu11g1195 429717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1195 835 ProSiteProfiles Serine proteases, subtilase domain profile. 141 692 - -
Cmu11g1195 835 ProSitePatterns Serine proteases, subtilase family, serine active site. 615 625 IPR023828 -
Cmu11g1195 835 Pfam PA domain 417 511 IPR003137 -
Cmu11g1195 835 Pfam Subtilase family 172 653 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu11g1195 835 CDD PA_subtilisin_like 394 532 - -
Cmu11g1195 835 SUPERFAMILY Subtilisin-like 147 696 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu11g1195 835 SUPERFAMILY Protease propeptides/inhibitors 104 145 - -
Cmu11g1195 835 CDD Peptidases_S8_3 148 651 IPR034197 -
Cmu11g1195 835 Gene3D - 709 832 - -
Cmu11g1195 835 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 91 805 IPR045051 -
Cmu11g1195 835 Gene3D Peptidase S8/S53 domain 174 705 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu11g1195 835 FunFam Subtilisin-like protease SBT1.5 174 396 - -
Cmu11g1195 835 Pfam Fibronectin type-III domain 737 829 IPR041469 -
Cmu11g1195 835 Pfam Peptidase inhibitor I9 83 145 IPR010259 -
Cmu11g1195 835 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 38 147 IPR037045 -
Cmu11g1195 835 Gene3D - 387 552 - -
Cmu11g1195 835 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 177 188 IPR023827 -
Cmu11g1195 835 PRINTS Subtilisin serine protease family (S8) signature 614 630 IPR015500 -
Cmu11g1195 835 PRINTS Subtilisin serine protease family (S8) signature 172 191 IPR015500 -
Cmu11g1195 835 PRINTS Subtilisin serine protease family (S8) signature 251 264 IPR015500 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0946 Cmu-Chr1:13140089 Cmu11g1195 Cmu-Chr11:23258692 1.20E-162 dispersed
Cmu01g2491 Cmu-Chr1:36772672 Cmu11g1195 Cmu-Chr11:23258692 1.10E-189 dispersed
Cmu10g1228 Cmu-Chr10:5120398 Cmu11g1195 Cmu-Chr11:23258692 2.90E-27 dispersed
Cmu10g1229 Cmu-Chr10:5129889 Cmu11g1195 Cmu-Chr11:23258692 9.20E-82 dispersed
Cmu10g2639 Cmu-Chr10:33141908 Cmu11g1195 Cmu-Chr11:23258692 2.20E-21 dispersed
Cmu11g1195 Cmu-Chr11:23258692 Cmu11g1196 Cmu-Chr11:23271627 6.20E-07 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1195 - - - 0.0