Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1222 ATGATGGGATCTTTAGTGGTGGCGGAATACAATGTGTCCTTTATTGGCTTGAGGACTTTCACCATGGCTGCTGATTCTTCCTTTGATGGTGCTATTTTCGACTCGCCAAAATCTAGTAAGTTGACTATGCAAGAGAAGAGAGAACTTGTATATGAAATTTCAAAGTCACATGGTGCAAGTGAGACACTGCAGTCATGGAGCCGTCAAGACATTCTACAAGTCCTGTGTGCAGAGATGGGGAAAGAAAGAAAATATACAGGCTTGACGAAGCAGAAAATAATAGAGCATCTTTTGAGACTCATATCCGAAAAGAAGTCATCCGTGCCTGACGTTTTGAAAAACCTTGAGCCACAGTCTCCTGCAGGTGGCCATAAAAATACCAAAAGGCAGAGGAAATCTGAGCATCTAGCTCAACTTTCTGTTCCTGCAAATGACTTTCCAACCAGTAGTTCCCATAATGATTTGGGTCATATGGCTTGCTGCAAAAACTTGGCTTGTCGAGCGACTCTGAGTCCCGAAGATGCTTTTTGTAGAAGGTGTTCATGTTGCATCTGTCGTCAGTATGATGATAACAAGGACCCTAGCTTGTGGATAAGTTGCAGTGCGGAGCCTCCATTTCAAGGTGACTCATGCAACATGTCATGTCATCTTGAATGTGCTTTAAAAGATGAAAGATCAGGAATTTCGAAAGCCGGACGAAGCAGGGGAATTGATGGGAGCTTCTACTGTGTTTCTTGTGGGAAATTAAATGATTTGCTTGGGTGCTGCAGAAAACAACTAGTTCATGCAAAAGATACAAGAAGGGTCGACATACTGTGTTATCGTGTTTCTTTGAGTCAAAAGCTTCTCCATAGAACTGAGAAGTATAAAGTGCTTTATCAGATTGTTGATGAGTCTGTGAGGAAGCTTGAAGCTGAAGTGGGACCAATAGCTGGTGTACCGGTAAAGATGGGTAGAGGTATTGTAAACAGGCTTTCGTCTGGACCCGAAGTTCAAAAACTCTGTGCTTCTGCTATTGAGTTACTGGACTCAATGATCTCCAGCAATTCCTTGCACCTTTCGCCTAATCCTGACATTCAAGATGCAAATTTTGTTCCTGCAAACATGGTTAGATTTGAAGATGTTCAGTCAACATCCCTCACTCTAGTTTTGAGTTGTGAAAATGGATCCTCTGAGAACCAGGTCGGCTTCACCTTATGGCATCGTAAGGCAGATGATGCAGATTACCCGGCAGAACCGACATGTATTCTACGACAACCGAAGGCGAGGTGTGCTGTGATGGGACTATCACCTGCTACTAAATATCATTTCAAAATTGTTCAGTTTGAGGGGACAAGGGAGTTGAGGGAGTTTGAAGTGCAGTTCTCAACAATTAGGGAGGTAGAAGAAAACCCAGGCTGTTTAGAAATTGAAAGAAGCCAAAGCCATGCAACCAACTGTAGCGACCTATCTAATCCTTCTTCGGTTGAAGACGAAACTACCGACATTCTTCCCTATGGTGATCGAACCGATAACCTAGGAAAAAACTCCACTGCCTATTCAAAGGGCACCGAAATGCTTTCCTCGGCTATCTTATCGACTGATGCTTTTAACCTCAGTGACAATGGTGAAGAAGGAACACCTGCGGGAACAGTTTCTGTGTTGGATGAGGCAAATGCTACAGGAATGGTAGGTTTGATCCCCAGTTCTGTTGCATCAAAGCTCGAGAACAGGCATGGACCAACTGCCCCAAAACTCAACACCGATAATCAGTTAAACGCCCTTGTTCGATCTGGTATGGAGCGCCAGCCATTCGTTGGCTGTTCTTCAGATGGCTTGCCTATTACTCCCTGCAAGCTTGAAGTGCTAAAGGATAGTCTTGGTAGAGGTGAGAGACCGAAATCCGGCTGCAAGGATCTCGACAATAGGACTCGAAAAGGAGGGGAACCCCAAGACGGCGGCACGTCAAAGATGCGAACTGGGGAAAGACAGGACGACAAATGTGCTGAAAATGGTGTTTCAGATCGGGATTTCGAGCATTATGTGAAGGTCATTAGATGGTTAGAATGCGAGGGTCATATTGAAAAAAATTTCAGGCAGAAATTTCTTACTTGGTACAGCTTGAGAGCATCCCAACAAGAAGTGAAGATTGTTAGGGTGTTTGTTGATACCTTTATTGAAGATCCAGCATCTCTTGCAGAACAACTTGTAGATACTTTTTCTGAATGCATTTCGAGCAAAAAACCGACGACTATGCCGCCCGGGTTCTGCATGAAGCTGTGGCACTGA 2268 44.18 MMGSLVVAEYNVSFIGLRTFTMAADSSFDGAIFDSPKSSKLTMQEKRELVYEISKSHGASETLQSWSRQDILQVLCAEMGKERKYTGLTKQKIIEHLLRLISEKKSSVPDVLKNLEPQSPAGGHKNTKRQRKSEHLAQLSVPANDFPTSSSHNDLGHMACCKNLACRATLSPEDAFCRRCSCCICRQYDDNKDPSLWISCSAEPPFQGDSCNMSCHLECALKDERSGISKAGRSRGIDGSFYCVSCGKLNDLLGCCRKQLVHAKDTRRVDILCYRVSLSQKLLHRTEKYKVLYQIVDESVRKLEAEVGPIAGVPVKMGRGIVNRLSSGPEVQKLCASAIELLDSMISSNSLHLSPNPDIQDANFVPANMVRFEDVQSTSLTLVLSCENGSSENQVGFTLWHRKADDADYPAEPTCILRQPKARCAVMGLSPATKYHFKIVQFEGTRELREFEVQFSTIREVEENPGCLEIERSQSHATNCSDLSNPSSVEDETTDILPYGDRTDNLGKNSTAYSKGTEMLSSAILSTDAFNLSDNGEEGTPAGTVSVLDEANATGMVGLIPSSVASKLENRHGPTAPKLNTDNQLNALVRSGMERQPFVGCSSDGLPITPCKLEVLKDSLGRGERPKSGCKDLDNRTRKGGEPQDGGTSKMRTGERQDDKCAENGVSDRDFEHYVKVIRWLECEGHIEKNFRQKFLTWYSLRASQQEVKIVRVFVDTFIEDPASLAEQLVDTFSECISSKKPTTMPPGFCMKLWH 755
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 23861461 23865720 - CmPI595203_11g012220.1 Cmu11g1222 429744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1222 755 PANTHER VIN3-LIKE PROTEIN 2-RELATED 34 755 IPR044514 GO:0010048(InterPro)|GO:0040029(InterPro)
Cmu11g1222 755 MobiDBLite consensus disorder prediction 622 663 - -
Cmu11g1222 755 MobiDBLite consensus disorder prediction 112 135 - -
Cmu11g1222 755 Pfam PHD - plant homeodomain finger protein 161 281 IPR032881 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu06g1080 Cmu-Chr6:20803156 Cmu11g1222 Cmu-Chr11:23861461 4.60E-95 dispersed
Cmu11g0249 Cmu-Chr11:2986676 Cmu11g1222 Cmu-Chr11:23861461 1.20E-91 dispersed
Cmu08g1099 Cmu-Chr8:23338520 Cmu11g1222 Cmu-Chr11:23861461 7.30E-114 transposed
Cmu11g1222 Cmu-Chr11:23861461 Cmu06g1407 Cmu-Chr6:25242849 3.00E-218 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1222 - - - 0.0