Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g1374 | ATGGCTTCCGCTTGTGCTTCTTCCGCCATTGCGGCTGTGGCAATCTCTTCATCCAGTTCCCAGAAGAATGGGTGCCCCAAGGCTTCTAATTTCCTTACCGGCAAGAAGCTGAGGCTGAGAAACTTAACTTCCGCGGCTGCTGTTGCTCCTCGATCAGCTCCGGTATGCGCCGCAGCTGACCCCGACAGACCTCTCTGGTTCCCTGGCAGCACCCCTCCTCCATGGCTCGACGGCAGCCTTCCCGGCGACTTTGGCTTTGACCCACTTGGTCTTGCGTCTGATCCGGAGAGTCTGAGATGGAACCAGCAGGCGGAGCTGGTACACTGCCGATGGGCAATGTTGGGGGCGGCCGGAATTTTCATCCCGGAATTTTTGACAAAGATCGGAATATTGAACACTCCGTCATGGTACACCGCCGGTGAATTGGAATACTTCACCGACACCACCACTCTGTTCATAGTGGAACTCATTTTCATTGGTTGGGCCGAAGGTAGACGGTGGGCCGACATCCTCAAACCCGGCTGCGTCAACACCGACCCGATTTTCCCTAACAACAAGCTCACCGGAACCGACGTCGGATACCCGGGTGGGCTTTGGTTCGACCCGCTCGGGTGGGGAAGCGGATCACCCGAAAAGATCAAGGAATTGAGAACGAAAGAGATAAAGAACGGGCGATTGGCTATGTTGGCGGTGATGGGAGCTTGGTTCCAACACATTTACACCGGCACCGGTCCCATTGACAACCTCTTCGCTCACCTTGCCGATCCCGGCCACGCCACCGTCTTCGCCGCTTTCACACCAAAGTGA | 807 | 56.26 | MASACASSAIAAVAISSSSSQKNGCPKASNFLTGKKLRLRNLTSAAAVAPRSAPVCAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYTAGELEYFTDTTTLFIVELIFIGWAEGRRWADILKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATVFAAFTPK | 268 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25880952 | 25883253 | - | CmPI595203_11g013740.1 | Cmu11g1374 | 429896 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g1374 | 268 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 73 | 258 | - | - | |
Cmu11g1374 | 268 | SUPERFAMILY | Chlorophyll a-b binding protein | 59 | 266 | - | - | |
Cmu11g1374 | 268 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 12 | 263 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Cmu11g1374 | 268 | Gene3D | Chlorophyll a/b binding protein domain | 73 | 258 | - | - | |
Cmu11g1374 | 268 | Pfam | Chlorophyll A-B binding protein | 72 | 238 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu03g2095 | Cmu-Chr3:29397058 | Cmu11g1374 | Cmu-Chr11:25880952 | 1.70E-88 | dispersed | |
Cmu04g1255 | Cmu-Chr4:27003296 | Cmu11g1374 | Cmu-Chr11:25880952 | 1.00E-61 | dispersed | |
Cmu08g1529 | Cmu-Chr8:27128653 | Cmu11g1374 | Cmu-Chr11:25880952 | 7.20E-50 | dispersed | |
Cmu09g1969 | Cmu-Chr9:35759877 | Cmu11g1374 | Cmu-Chr11:25880952 | 6.40E-37 | dispersed | |
Cmu10g2907 | Cmu-Chr10:35434154 | Cmu11g1374 | Cmu-Chr11:25880952 | 1.00E-27 | dispersed | |
Cmu11g1374 | Cmu-Chr11:25880952 | Cmu11g1896 | Cmu-Chr11:30955298 | 3.40E-23 | dispersed | |
Cmu11g1374 | Cmu-Chr11:25880952 | Cmu06g1664 | Cmu-Chr6:27755842 | 1.30E-62 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g1374 | K08908 | - | csv:101214055 | 518.079 |