Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1379 ATGGCCGACGATTCCCCCGAGAAGAACATCCTCCAGAGCACCGCTCTTCTCCAGTATATTCTGGAAGCCAACGCCTATCCAAGAGAGCATGAACAGTTGAAGGAACTCGGGGAATCCACCTTCGAGAAATTTGACAAGTCCATGAGTGTGATGAATGTACCGGTGGATGAAGGATTATTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACTACTGCGCTTGCATTGCCCGCCGATGGCCAGATAACAGCAATTGATGTGGATAGACAACCATTCGAATTTGGTTTGCCATTTATAAGAAAGGCGGGAGTTGATCATAAGATTAATTTTGTGGAATCCCAATCATTAGTTGCCCTCAATGACTTCCTCAATGATGGCAAAGAAGAAGAATTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTACATCAAATATCACGAGTTGCTTCAAATATCACGAGTTGCTTCTAAAATTGGTGAAGTGGCACTAAACGATGACGATGTCCATGAAGATTTGAAGGAGAACAAAAGTCATATACAACGACTCAATGCTTTTCTAGTAAATGACATGCGGGTAGAGATAGTTCTCCTCTCCATTGGAGACGGCGTCACTCTTTGCAGGCGTATCAAATAA 681 42.29 MADDSPEKNILQSTALLQYILEANAYPREHEQLKELGESTFEKFDKSMSVMNVPVDEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVDRQPFEFGLPFIRKAGVDHKINFVESQSLVALNDFLNDGKEEEFDFAFVDAKKSEYIKYHELLQISRVASKIGEVALNDDDVHEDLKENKSHIQRLNAFLVNDMRVEIVLLSIGDGVTLCRRIK 226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 25946932 25950295 - CmPI595203_11g013790.1 Cmu11g1379 429901
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1379 226 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 224 IPR029063 -
Cmu11g1379 226 PANTHER O-METHYLTRANSFERASE-RELATED 7 225 IPR050362 GO:0008757(PANTHER)
Cmu11g1379 226 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 225 IPR002935 GO:0008171(InterPro)
Cmu11g1379 226 Gene3D Vaccinia Virus protein VP39 1 226 IPR029063 -
Cmu11g1379 226 Pfam O-methyltransferase 25 225 IPR002935 GO:0008171(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu11g1379 Cmu-Chr11:25946932 Cmu11g1382 Cmu-Chr11:25974633 1.30E-97 dispersed
Cmu11g1379 Cmu-Chr11:25946932 Cmu11g1380 Cmu-Chr11:25954996 6.60E-105 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1379 K00588 - csv:101212121 343.199