Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1380 ATGGCCGACGATTCCCCCAAGAAGAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTGGAAGCCAACGCCTATCCAAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCCACCTTCGAGAAATTCGATAAGTCCATGAGTTTGATGAATGTACCAGCGGATGAAGGATTGTTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCGCCGATGGCCAGATAACGGCAATTGATGTGAATAGACAATCGTTCGAATTTGGTTTGCCATTTATAAAAAAAGCGGGAGTTGATCATAAGATCAATTTTGTGGAATCTCAGGCATTGGTTGCCTTGAATGACCTCCTCAATGATGGCAAAGAAGAAGATTTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTATATTAAATATCATGAGTTGCTTCTAAAACTAGTGAAGGTAGGTGGAGTAATTGTCTATGATAACACTCTATGGTTTGGATCAGTGGCGCTAAGTGATGACGTCGTCCATGAAAAGTTGAAGGAGAACAAACATCATATACAACAATTCAATGCTTTCCTAGTAAATGACATGCGGGTGGAGATAGCTCTCCTCACCATTGGAGATGGTGTCACTCTTTGTAGACGTATCAAATAA 708 41.67 MADDSPKKNILQSTALLQYILEANAYPREHEQLKELRESTFEKFDKSMSLMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVNRQSFEFGLPFIKKAGVDHKINFVESQALVALNDLLNDGKEEDFDFAFVDAKKSEYIKYHELLLKLVKVGGVIVYDNTLWFGSVALSDDVVHEKLKENKHHIQQFNAFLVNDMRVEIALLTIGDGVTLCRRIK 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 25954996 25959823 - CmPI595203_11g013800.1 Cmu11g1380 429902
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1380 235 CDD AdoMet_MTases 74 177 - -
Cmu11g1380 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 233 IPR029063 -
Cmu11g1380 235 PANTHER O-METHYLTRANSFERASE-RELATED 7 234 IPR050362 GO:0008757(PANTHER)
Cmu11g1380 235 Gene3D Vaccinia Virus protein VP39 1 235 IPR029063 -
Cmu11g1380 235 Pfam O-methyltransferase 25 234 IPR002935 GO:0008171(InterPro)
Cmu11g1380 235 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 234 IPR002935 GO:0008171(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1044 Cmu-Chr7:25315721 Cmu11g1380 Cmu-Chr11:25954996 8.50E-37 dispersed
Cmu11g1380 Cmu-Chr11:25954996 Cmu11g1382 Cmu-Chr11:25974633 1.30E-111 dispersed
Cmu11g1379 Cmu-Chr11:25946932 Cmu11g1380 Cmu-Chr11:25954996 6.60E-105 tandem
Cmu11g1380 Cmu-Chr11:25954996 Cmu11g1381 Cmu-Chr11:25964241 1.60E-106 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1380 K00588 - csv:101212121 379.793