Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu11g1380 | ATGGCCGACGATTCCCCCAAGAAGAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTGGAAGCCAACGCCTATCCAAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCCACCTTCGAGAAATTCGATAAGTCCATGAGTTTGATGAATGTACCAGCGGATGAAGGATTGTTTCTATCAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCGCCGATGGCCAGATAACGGCAATTGATGTGAATAGACAATCGTTCGAATTTGGTTTGCCATTTATAAAAAAAGCGGGAGTTGATCATAAGATCAATTTTGTGGAATCTCAGGCATTGGTTGCCTTGAATGACCTCCTCAATGATGGCAAAGAAGAAGATTTTGATTTTGCATTTGTTGATGCCAAAAAATCGGAGTATATTAAATATCATGAGTTGCTTCTAAAACTAGTGAAGGTAGGTGGAGTAATTGTCTATGATAACACTCTATGGTTTGGATCAGTGGCGCTAAGTGATGACGTCGTCCATGAAAAGTTGAAGGAGAACAAACATCATATACAACAATTCAATGCTTTCCTAGTAAATGACATGCGGGTGGAGATAGCTCTCCTCACCATTGGAGATGGTGTCACTCTTTGTAGACGTATCAAATAA | 708 | 41.67 | MADDSPKKNILQSTALLQYILEANAYPREHEQLKELRESTFEKFDKSMSLMNVPADEGLFLSMLLKLMNAKKTIEIGVFTGYSLLTTALALPADGQITAIDVNRQSFEFGLPFIKKAGVDHKINFVESQALVALNDLLNDGKEEDFDFAFVDAKKSEYIKYHELLLKLVKVGGVIVYDNTLWFGSVALSDDVVHEKLKENKHHIQQFNAFLVNDMRVEIALLTIGDGVTLCRRIK | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 25954996 | 25959823 | - | CmPI595203_11g013800.1 | Cmu11g1380 | 429902 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu11g1380 | 235 | CDD | AdoMet_MTases | 74 | 177 | - | - | |
| Cmu11g1380 | 235 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 16 | 233 | IPR029063 | - | |
| Cmu11g1380 | 235 | PANTHER | O-METHYLTRANSFERASE-RELATED | 7 | 234 | IPR050362 | GO:0008757(PANTHER) | |
| Cmu11g1380 | 235 | Gene3D | Vaccinia Virus protein VP39 | 1 | 235 | IPR029063 | - | |
| Cmu11g1380 | 235 | Pfam | O-methyltransferase | 25 | 234 | IPR002935 | GO:0008171(InterPro) | |
| Cmu11g1380 | 235 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 9 | 234 | IPR002935 | GO:0008171(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu07g1044 | Cmu-Chr7:25315721 | Cmu11g1380 | Cmu-Chr11:25954996 | 8.50E-37 | dispersed | |
| Cmu11g1380 | Cmu-Chr11:25954996 | Cmu11g1382 | Cmu-Chr11:25974633 | 1.30E-111 | dispersed | |
| Cmu11g1379 | Cmu-Chr11:25946932 | Cmu11g1380 | Cmu-Chr11:25954996 | 6.60E-105 | tandem | |
| Cmu11g1380 | Cmu-Chr11:25954996 | Cmu11g1381 | Cmu-Chr11:25964241 | 1.60E-106 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu11g1380 | K00588 | - | csv:101212121 | 379.793 |