Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1382 ATGGCGGACAATTACCCCTTGAAAAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTCGAAGCCAACGCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCAACCATTAAGAAATTTGAAATCGCGAGTATGATGAATGTACCGGTAGATGAAGGATTATTTCTATTAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCTCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTGGTTTGCCATTTATAAGAAAGGCGGGAGTTGATCATAAGATCAATTTTGTAGAATCTCAGGCATTGGTTGCCCTAAATGACCTCCTCAATGATGGTAAAGAAGGAGAGTTTGATTTTGCATTTGTTGATGCCAATAAATCAGAGTACATTAAATATCATGAGTTCCTTCTAAAACTCGTGAAGATAGGTGGAGTAATTGCCTATGATAACACTCTATGGTTCGGATCAGTGGCGCTAAGTGATGACGCCGTCCATGAAAATTTGAAGGAGAACAAAAGTTATTTGCAACGATTCAATGCTTTTCTAGTCAATGACACACGGGTGGAGATAGTTCTCCTCTCCATTGGAGATGGTATCACTCTTTGCAGGCGTATCAAATAA 705 40.99 MADNYPLKNILQSTALLQYILEANAYPREHEQLKELRESTIKKFEIASMMNVPVDEGLFLLMLLKLMNAKKTIEIGVFTGYSLLTTALALPSDGQITAIDVDRESFEFGLPFIRKAGVDHKINFVESQALVALNDLLNDGKEGEFDFAFVDANKSEYIKYHEFLLKLVKIGGVIAYDNTLWFGSVALSDDAVHENLKENKSYLQRFNAFLVNDTRVEIVLLSIGDGITLCRRIK 234
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25974633 25979008 - CmPI595203_11g013820.1 Cmu11g1382 429904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1382 234 Gene3D Vaccinia Virus protein VP39 2 234 IPR029063 -
Cmu11g1382 234 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 9 233 IPR002935 GO:0008171(InterPro)
Cmu11g1382 234 Pfam O-methyltransferase 25 233 IPR002935 GO:0008171(InterPro)
Cmu11g1382 234 CDD AdoMet_MTases 73 176 - -
Cmu11g1382 234 PANTHER O-METHYLTRANSFERASE-RELATED 8 233 IPR050362 GO:0008757(PANTHER)
Cmu11g1382 234 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 16 232 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0629 Cmu-Chr2:6173436 Cmu11g1382 Cmu-Chr11:25974633 3.30E-65 dispersed
Cmu11g1379 Cmu-Chr11:25946932 Cmu11g1382 Cmu-Chr11:25974633 1.30E-97 dispersed
Cmu11g1380 Cmu-Chr11:25954996 Cmu11g1382 Cmu-Chr11:25974633 1.30E-111 dispersed
Cmu11g1381 Cmu-Chr11:25964241 Cmu11g1382 Cmu-Chr11:25974633 8.50E-104 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1382 K00588 - csv:101212121 367.466