Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu11g1382 | ATGGCGGACAATTACCCCTTGAAAAACATCCTTCAGAGCACCGCTCTTCTCCAGTATATACTCGAAGCCAACGCCTATCCGAGAGAGCATGAACAGTTGAAGGAACTCAGGGAATCAACCATTAAGAAATTTGAAATCGCGAGTATGATGAATGTACCGGTAGATGAAGGATTATTTCTATTAATGCTTTTGAAATTGATGAACGCAAAGAAAACGATAGAGATCGGTGTATTCACTGGCTATTCCCTCCTCACCACTGCGCTTGCACTGCCCTCCGATGGCCAGATAACAGCAATTGATGTTGATAGAGAATCATTCGAGTTTGGTTTGCCATTTATAAGAAAGGCGGGAGTTGATCATAAGATCAATTTTGTAGAATCTCAGGCATTGGTTGCCCTAAATGACCTCCTCAATGATGGTAAAGAAGGAGAGTTTGATTTTGCATTTGTTGATGCCAATAAATCAGAGTACATTAAATATCATGAGTTCCTTCTAAAACTCGTGAAGATAGGTGGAGTAATTGCCTATGATAACACTCTATGGTTCGGATCAGTGGCGCTAAGTGATGACGCCGTCCATGAAAATTTGAAGGAGAACAAAAGTTATTTGCAACGATTCAATGCTTTTCTAGTCAATGACACACGGGTGGAGATAGTTCTCCTCTCCATTGGAGATGGTATCACTCTTTGCAGGCGTATCAAATAA | 705 | 40.99 | MADNYPLKNILQSTALLQYILEANAYPREHEQLKELRESTIKKFEIASMMNVPVDEGLFLLMLLKLMNAKKTIEIGVFTGYSLLTTALALPSDGQITAIDVDRESFEFGLPFIRKAGVDHKINFVESQALVALNDLLNDGKEGEFDFAFVDANKSEYIKYHEFLLKLVKIGGVIAYDNTLWFGSVALSDDAVHENLKENKSYLQRFNAFLVNDTRVEIVLLSIGDGITLCRRIK | 234 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 25974633 | 25979008 | - | CmPI595203_11g013820.1 | Cmu11g1382 | 429904 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu11g1382 | 234 | Gene3D | Vaccinia Virus protein VP39 | 2 | 234 | IPR029063 | - | |
Cmu11g1382 | 234 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 9 | 233 | IPR002935 | GO:0008171(InterPro) | |
Cmu11g1382 | 234 | Pfam | O-methyltransferase | 25 | 233 | IPR002935 | GO:0008171(InterPro) | |
Cmu11g1382 | 234 | CDD | AdoMet_MTases | 73 | 176 | - | - | |
Cmu11g1382 | 234 | PANTHER | O-METHYLTRANSFERASE-RELATED | 8 | 233 | IPR050362 | GO:0008757(PANTHER) | |
Cmu11g1382 | 234 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 16 | 232 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g0629 | Cmu-Chr2:6173436 | Cmu11g1382 | Cmu-Chr11:25974633 | 3.30E-65 | dispersed | |
Cmu11g1379 | Cmu-Chr11:25946932 | Cmu11g1382 | Cmu-Chr11:25974633 | 1.30E-97 | dispersed | |
Cmu11g1380 | Cmu-Chr11:25954996 | Cmu11g1382 | Cmu-Chr11:25974633 | 1.30E-111 | dispersed | |
Cmu11g1381 | Cmu-Chr11:25964241 | Cmu11g1382 | Cmu-Chr11:25974633 | 8.50E-104 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu11g1382 | K00588 | - | csv:101212121 | 367.466 |