Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1426 ATGGCGGTCACCTCTTCCCCTCGCGAGGAGTATGTTTACATGGCCAAGCTTGCCGAGCAAGCTGAGCGCTATGAGGAGATGGTCGAGTTTATGGAGAAGGTCTCCGCCGCTACAGACAACGAGGAACTCACCGTCGAGGAGCGGAACCTTCTCTCTGTTGCTTACAAGAATGTTATTGGAGCGCGTAGAGCCTCCTGGAGGATTATTTCCTCCATTGAACAGAAGGAGGAGAGCCGAGGGAATGATGATCATGTCTCCGTTATCCGAGAATACAGATCCAAGATCGAGACTGAGCTCTCCAACATCTGTGATGGGATCCTTAAGCTTCTTGACTCCCGTCTCATTTCCTCTGCTGCTTCTGGTGACTCCAAGGTGTTTTATCTCAAGATGAAGGGAGATTATCATAGATACCTTGCTGAATTCAAGACCGGAGCCGAGCGGAAGGAAGCTGCCGAAAGTACTCTCACTGCTTATAAATCTGCACAGGATATTGCAAATGCTGAACTTGCTCCTACTCACCCCATACGACTTGGGCTGGCTTTGAACTTCTCAGTGTTCTATTATGAGATTCTGAATTCCCCTGATCGTGCTTGCAGCCTTGCTAAACAGGCATTCGATGAAGCAATTGCTGAGTTGGATACACTGGGCGAGGAATCATACAAAGATAGCACTTTGATCATGCAACTTCTTCGTGACAACCTCACTCTATGGACTTCGGACATGCAGGATGATGGAGATGAGATTAAAGAAGCAGCTCCCAAACGTGACGATGAATAG 777 48.13 MAVTSSPREEYVYMAKLAEQAERYEEMVEFMEKVSAATDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNDDHVSVIREYRSKIETELSNICDGILKLLDSRLISSAASGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGDEIKEAAPKRDDE 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26491755 26493750 + CmPI595203_11g014260.1 Cmu11g1426 429948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1426 258 PIRSF 14-3-3 2 250 IPR000308 -
Cmu11g1426 258 SMART 1433_4 8 250 IPR023410 -
Cmu11g1426 258 FunFam 14-3-3 protein epsilon 4 251 - -
Cmu11g1426 258 Coils Coil 14 34 - -
Cmu11g1426 258 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Cmu11g1426 258 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Cmu11g1426 258 Pfam 14-3-3 protein 14 238 IPR023410 -
Cmu11g1426 258 Gene3D - 1 252 IPR036815 -
Cmu11g1426 258 PANTHER 14-3-3 PROTEIN 8 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cmu11g1426 258 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Cmu11g1426 258 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Cmu11g1426 258 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Cmu11g1426 258 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Cmu11g1426 258 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Cmu11g1426 258 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Cmu11g1426 258 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu07g1598 Cmu-Chr7:31142492 Cmu11g1426 Cmu-Chr11:26491755 3.00E-117 dispersed
Cmu08g1121 Cmu-Chr8:23579173 Cmu11g1426 Cmu-Chr11:26491755 1.40E-100 dispersed
Cmu11g1416 Cmu-Chr11:26385244 Cmu11g1426 Cmu-Chr11:26491755 6.60E-90 dispersed
Cmu11g1426 Cmu-Chr11:26491755 Cmu11g1449 Cmu-Chr11:26706418 3.00E-101 dispersed
Cmu11g1426 Cmu-Chr11:26491755 Cmu08g1062 Cmu-Chr8:22922714 4.00E-130 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1426 K06630 - csv:101210822 494.967