Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1449 ATGGCGTCCGCCATCCCTGAAAACCTAACAAGGGAGCAGTATGTTTACCTTTCGAAGCTTTCCGAGCAAGCCGAGCGCTACGAGGAAATGGTTCAGTTCATGCAGAAGCTTGTACTGAGCTCCACTCCAGCCTCGGAGCTCACTGTCGAGGAGCGCAATCTCCTTTCCGTCGCATACAAAAATGTGATCGGTTCTCTCCGCGCGGCTTGGCGTATCGTATCCTCAATTGAACAGAAGGAAGAAGGAAGGAAGAACGAAGATCACGTTGTCCTTGTCAAGGATTACAGATCCAAGGTCGAGTCCGAGCTCACCGACGTCTGCGCCAGTATTTTGAAGCTGTTGGACTCCAATCTGATACCATCCTCATCCTCTGGTGAATCTAAGGTGTTCTACTTAAAGATGAAGGGAGATTACCATAGGTACCTGGCGGAGTTTAAGATCGGGGAGGAGAGGAAGTCCGCCGCCGAGGATACCATGCTAGCTTACAAGGCTGCTCAGGATATTGCAGCTGCCGATCTTGCACCAACGCATCCAATCAGGCTGGGCCTAGCACTAAATTTCTCTGTTTTTTACTTTGAGATCCTGAACCAGCCTGACAAAGCCTGTAGCATGGCCAAACAGGCATTTGAAGAAGCCATTGCGGAATTGGACACATTAGGTGAAGAATCATACAAGGATAGCACTCTAATCATGCAGCTCTTAAGAGACAATCTCACCCTTTGGACTTCTGATACACAGATTATCGGTCGGAGTTTGATTCCTTCTAGGGTTTCTCTGAGTTCTCTCTCGTCTCATGGAGGACTTCGCTTTTCACGATGGCAACGTCTGCGGTTTGCTCGAGAGCAGGCACATCAACTTTCGTCAAGATCCTACCTATGGTTTGCAGATGCACTCGTCATTCATCCAAAGACTCTCCCAGGAAAAGGAACTGGAGTGGCCTGGAATTCTAGTGGTTCGCTTTTGATATCTGGATCAGATGACACCCGGATAAACATCTGGAGCTATTCTGGTCGAAAACTATTGCACTCTGTGGATACTGGGCATTCTGCAAACATATTTTGTACAAAATTTGTTCCTGAAACGTCTGATGAGCTTGTGGTCTCAGGAGCTGGGGATGCAGAGGTGCGCTTGTTTAATTTATCTCGCTTACGTGGGAGAGGACAAGATGATAATCCCATATCTTCATCGGCTTTGTATCAGTGTCACACCAGAAGAGTAAAAAAATTAGCTGTTGAAATAGGGAATCCAAATGTAGTATGGAGTGCTAGTGAGGATGGGACTCTTAGACAGCATGATTTTCGAGAGGGCATGTCTTGTCCTCCTGACGGAGCTTCTCACCAAGAATGCCACAATGTTCTTCTTGATTTGCGGTGTGGAGCTAGGAGGTCATTGGCTGATCCTCCCAGACAAACCCTTGCTTTGAAATCCTGTGACGTTAGTTCCACTAGGCCTCATTTACTTCTGGTTGGTGGAAGTGATGCATTTGCACGGTTATATGATAGAAGGATGCTGCCGCCCTTGTCTTCCAGCCAGAAGAGGATGTCACCACCTCCCTGTGTTAACTACTTCTGTCCAATGCATCTCTCTGATCGGGTCCGATCGGGTTTGCATTTGACTCATGTTACTTTTAGTCCGAATGGAGAAGAGATTCTGCTTAGCTATAGTGGAGAACATGCATACTTGATGAATGTAAATCATGCTGGCCTAAGTACAATGCAGTATACATCAGGAGATGTTTCTAAGTTAATGAGCTTCACTCCTGTACTCAACGGATTGGAATTGCAGCATCCGGTTTCCAATCTATCTAATGGTTTGCCTTTAAATTGTGGTGTTAATGCAAAGCTTGATAAATGCAGAAAATTATTACAAATAGCTGAAAAATGCTTGGACGGTGGGAACTACTTTGGTGGAATAGAGGCATGCAATGAAATTTTGGATGGATATGGTCGTAATATTGGTGTTATTTTCAAGCACGATACATTATGCACACGTGCTGCCTTATTACTCAAGCGGAAGTGGAAGAATGATGTTCATATGGCCATAAGAGATTGTTATAGTGCTAGGAAAATGGATCATTCCTCTTTCAGAGCACATTACTACATGTGCGAAGCTCTATCGCAGCTGGGTAGACATAAGGAAGCCCTAGATTTTGCATTTGCTGCTCAGTGTTTAGCCCCATCTAACCCTGAAGTGGCAGAGAAGGTGGAAAGTGTAAAGAGGGAACTCGCAGCAGCTGAACTGGAAAAATCAAATAAAGGCAATGATGGAGCTCTAAGATCAGCACCGTTAGGTGGTGTATTATCATTAAGTGACTTTCTTTACCGCTCAGATGCAAATAGTGATGTTTCACAAGATGGGCTGAGATCAGAAAGAGAAGATTCTGATTATGATGAGGAGGTGGAGCTGGACTTTGAAACCTTATCAGGTGATGAAGCCCATGATGTCGATTCCAACGTTCTACATGGAAGTTTAAATCTTAGAATACATAGACGAGTTGATCCAGCAAGAGAAAGGGTTGGCCCAAATGGCTCCTGTGGGTCTCCTTCATCATCACAAAATGATGCAACACTTTATCAGCCGGAACCCGTCATTGATATGAAGCAAAGATATGTAGGTCATTGTAACATCGGAACTGATATTAAACAAGCCAGTTTTCTCGGCCAAAGAGGTGAATACGTTGCCAGTGGTAGCGATGATGGTAGATGGTTTATTTGGGAAAAGGGAACTGGTAGACTGATTAAAATACTTGTTGGAGATGGAGCTGTTGTGAATTGTGTTCAAAGTCATCCATTTGATTGTGCCATCGCTACTAGCGGGATCGACAATACCATAAAGCTATGGACTCCAACTGATCCAGTCCCGTCACTCATAGCCGGTGGAGCGGTCGGACCGCAGGCAGCCGACGTGTTGGCTGTAATAGAGAATAATCAGCGCAGACTCTGCCGTAATAGAGAAGCCATACTGCCTTTTGAAATTTTAGAGCGAGTTGATATTATAGTTTTTGTTTATATGGATTCGCGAAGAAATTGGAATAGTCATAGTTGGCGAGTAGCAGTCAGCACACCGAACACATCGTTCAACAGACTCATACGAGTTGAGTCAGGTTATGGGAAGCCTCATTCAAGTTCTCGATATATAACATTTAACAGTCAAGCTACTATTTCTATGGGTGTTATTTAA 3180 44.65 MASAIPENLTREQYVYLSKLSEQAERYEEMVQFMQKLVLSSTPASELTVEERNLLSVAYKNVIGSLRAAWRIVSSIEQKEEGRKNEDHVVLVKDYRSKVESELTDVCASILKLLDSNLIPSSSSGESKVFYLKMKGDYHRYLAEFKIGEERKSAAEDTMLAYKAAQDIAAADLAPTHPIRLGLALNFSVFYFEILNQPDKACSMAKQAFEEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDTQIIGRSLIPSRVSLSSLSSHGGLRFSRWQRLRFAREQAHQLSSRSYLWFADALVIHPKTLPGKGTGVAWNSSGSLLISGSDDTRINIWSYSGRKLLHSVDTGHSANIFCTKFVPETSDELVVSGAGDAEVRLFNLSRLRGRGQDDNPISSSALYQCHTRRVKKLAVEIGNPNVVWSASEDGTLRQHDFREGMSCPPDGASHQECHNVLLDLRCGARRSLADPPRQTLALKSCDVSSTRPHLLLVGGSDAFARLYDRRMLPPLSSSQKRMSPPPCVNYFCPMHLSDRVRSGLHLTHVTFSPNGEEILLSYSGEHAYLMNVNHAGLSTMQYTSGDVSKLMSFTPVLNGLELQHPVSNLSNGLPLNCGVNAKLDKCRKLLQIAEKCLDGGNYFGGIEACNEILDGYGRNIGVIFKHDTLCTRAALLLKRKWKNDVHMAIRDCYSARKMDHSSFRAHYYMCEALSQLGRHKEALDFAFAAQCLAPSNPEVAEKVESVKRELAAAELEKSNKGNDGALRSAPLGGVLSLSDFLYRSDANSDVSQDGLRSEREDSDYDEEVELDFETLSGDEAHDVDSNVLHGSLNLRIHRRVDPARERVGPNGSCGSPSSSQNDATLYQPEPVIDMKQRYVGHCNIGTDIKQASFLGQRGEYVASGSDDGRWFIWEKGTGRLIKILVGDGAVVNCVQSHPFDCAIATSGIDNTIKLWTPTDPVPSLIAGGAVGPQAADVLAVIENNQRRLCRNREAILPFEILERVDIIVFVYMDSRRNWNSHSWRVAVSTPNTSFNRLIRVESGYGKPHSSSRYITFNSQATISMGVI 1059
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26706418 26726092 - CmPI595203_11g014490.1 Cmu11g1449 429971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1449 1059 FunFam Transducin family protein / WD-40 repeat family protein 817 991 - -
Cmu11g1449 1059 ProSitePatterns 14-3-3 proteins signature 2. 224 243 IPR023409 -
Cmu11g1449 1059 SMART WD40_4 392 432 IPR001680 GO:0005515(InterPro)
Cmu11g1449 1059 SMART WD40_4 863 906 IPR001680 GO:0005515(InterPro)
Cmu11g1449 1059 SMART WD40_4 298 334 IPR001680 GO:0005515(InterPro)
Cmu11g1449 1059 SMART WD40_4 337 379 IPR001680 GO:0005515(InterPro)
Cmu11g1449 1059 SMART WD40_4 909 948 IPR001680 GO:0005515(InterPro)
Cmu11g1449 1059 SMART WD40_4 460 500 IPR001680 GO:0005515(InterPro)
Cmu11g1449 1059 ProSitePatterns 14-3-3 proteins signature 1. 52 62 IPR023409 -
Cmu11g1449 1059 SUPERFAMILY TPR-like 615 734 IPR011990 GO:0005515(InterPro)
Cmu11g1449 1059 MobiDBLite consensus disorder prediction 779 798 - -
Cmu11g1449 1059 Pfam 14-3-3 protein 18 242 IPR023410 -
Cmu11g1449 1059 Gene3D - 303 590 IPR015943 GO:0005515(InterPro)
Cmu11g1449 1059 Gene3D - 2 250 IPR036815 -
Cmu11g1449 1059 SMART 1433_4 11 255 IPR023410 -
Cmu11g1449 1059 PANTHER WD REPEAT DOMAIN-CONTAINING FAMILY 312 996 IPR045151 GO:0005737(PANTHER)|GO:0045717(PANTHER)|GO:0080008(PANTHER)
Cmu11g1449 1059 Gene3D Tetratricopeptide repeat domain 610 758 IPR011990 GO:0005515(InterPro)
Cmu11g1449 1059 MobiDBLite consensus disorder prediction 831 856 - -
Cmu11g1449 1059 SUPERFAMILY WD40 repeat-like 309 947 IPR036322 GO:0005515(InterPro)
Cmu11g1449 1059 ProSiteProfiles Trp-Asp (WD) repeats profile. 916 947 IPR001680 GO:0005515(InterPro)
Cmu11g1449 1059 Coils Coil 728 755 - -
Cmu11g1449 1059 SUPERFAMILY 14-3-3 protein 10 244 IPR036815 -
Cmu11g1449 1059 ProSiteProfiles Trp-Asp (WD) repeats profile. 312 343 IPR001680 GO:0005515(InterPro)
Cmu11g1449 1059 Coils Coil 17 37 - -
Cmu11g1449 1059 Gene3D - 865 992 IPR015943 GO:0005515(InterPro)
Cmu11g1449 1059 PRINTS 14-3-3 protein zeta signature 95 119 IPR000308 -
Cmu11g1449 1059 PRINTS 14-3-3 protein zeta signature 161 187 IPR000308 -
Cmu11g1449 1059 PRINTS 14-3-3 protein zeta signature 46 75 IPR000308 -
Cmu11g1449 1059 PRINTS 14-3-3 protein zeta signature 126 148 IPR000308 -
Cmu11g1449 1059 PRINTS 14-3-3 protein zeta signature 188 214 IPR000308 -
Cmu11g1449 1059 PRINTS 14-3-3 protein zeta signature 215 244 IPR000308 -
Cmu11g1449 1059 FunFam 14-3-3 protein epsilon 8 251 - -
Cmu11g1449 1059 Pfam WD domain, G-beta repeat 911 947 IPR001680 GO:0005515(InterPro)
Cmu11g1449 1059 Pfam WD domain, G-beta repeat 310 334 IPR001680 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g2072 Cmu-Chr2:34403458 Cmu11g1449 Cmu-Chr11:26706418 5.00E-17 dispersed
Cmu08g1062 Cmu-Chr8:22922714 Cmu11g1449 Cmu-Chr11:26706418 7.90E-102 dispersed
Cmu11g1426 Cmu-Chr11:26491755 Cmu11g1449 Cmu-Chr11:26706418 3.00E-101 dispersed
Cmu11g1449 Cmu-Chr11:26706418 Cmu02g0407 Cmu-Chr2:3693430 1.20E-18 dispersed
Cmu11g1449 Cmu-Chr11:26706418 Cmu08g1121 Cmu-Chr8:23579173 1.60E-121 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1449 K11807 - csv:101206836 1305.81