Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1456 ATGTTCCCAAAGCCCCACCACCAACCACCGCCCCATTCCCAGCCCTTTCCCCGTTCTTTTTCCGTCGCCGCCACTCCGCCGCCGCGTGATTCACCAGCCTCCGCCGATGAGGATTCCGCGGCCGGTCCCTCGCCTCTCGCTCACGCCATGGTTCTCAAAGAACCGACCTCCACCGGCGACGGAGCTTCCATCGAGGTTGTGCGCCGCCCCCGCGGCCGCCCGCCGGGATCCAAGAACAAGCCGAAGCCAGCGGCCGTCGTTGTCGCCGGCCGCGAGGCCGAGCCGGCGATGAGTCCTTATGTACTCGAAGTCCCCGGCGGCAGCGATGTCGTCGAATCGATTTCCCGATTTTGCCGCCGCAGAAACACAGGGCTCTGTATTCTCAACGCTTACGGAACCGTCGCTGACGTCACTCTCCGGCAACCGTCGTCGTCTCCGGTCAGTACAGTCACTTTCCATGGACGATTCGATATTCTATCCGTCTGCGCAACTTTTGTTCCTCACACGACGTCGTTTCCAATTCCTAATGGATTCACCATCACGCTAGCCGGACCGCAGGGCCAGATCTTCGGCGGCTTGGTTGCCGGATCTTTAATCGGCGTCGGAACCGTCTATGTTATAGCCGCTTCATTCAACAATCCGTCGTATCAGCGGCTGCCATCGGAGGATGAGGTCAGAAAATTAACCTTCAGCGATGTTGAAGAAGCTCACTCTCCGATCTCCGGCGGCAAAGATAGCGAAAACACCGCCGCAGCCGCCGCCACAGAGACCTGCGGTTTGCTGCCGATGTACAGCACTCACTCCTCTTCCGACGTAATTTGGACTCCGGCCGCCAGACAACCGCCTCCACCGCACCATCGTCAGTACTAA 870 59.77 MFPKPHHQPPPHSQPFPRSFSVAATPPPRDSPASADEDSAAGPSPLAHAMVLKEPTSTGDGASIEVVRRPRGRPPGSKNKPKPAAVVVAGREAEPAMSPYVLEVPGGSDVVESISRFCRRRNTGLCILNAYGTVADVTLRQPSSSPVSTVTFHGRFDILSVCATFVPHTTSFPIPNGFTITLAGPQGQIFGGLVAGSLIGVGTVYVIAASFNNPSYQRLPSEDEVRKLTFSDVEEAHSPISGGKDSENTAAAAATETCGLLPMYSTHSSSDVIWTPAARQPPPPHHRQY 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26790324 26791193 - CmPI595203_11g014560.1 Cmu11g1456 429978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1456 289 CDD DUF296 99 211 IPR005175 -
Cmu11g1456 289 MobiDBLite consensus disorder prediction 1 84 - -
Cmu11g1456 289 Gene3D - 98 237 - -
Cmu11g1456 289 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 223 - -
Cmu11g1456 289 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 54 247 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)
Cmu11g1456 289 MobiDBLite consensus disorder prediction 1 16 - -
Cmu11g1456 289 Pfam Plants and Prokaryotes Conserved (PCC) domain 99 212 IPR005175 -
Cmu11g1456 289 ProSiteProfiles PPC domain profile profile. 94 234 IPR005175 -
Cmu11g1456 289 FunFam AT-hook motif nuclear-localized protein 98 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu11g0675 Cmu-Chr11:7436826 Cmu11g1456 Cmu-Chr11:26790324 3.70E-32 dispersed
Cmu11g1456 Cmu-Chr11:26790324 Cmu08g1111 Cmu-Chr8:23471221 5.00E-81 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1456 - - - 0.0