Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1458 ATGCTTCTTGGTGCAATCGTGTTGATATTAGTGTCTCATTGGGTCAAGAATCTCAAAGCCCTCGTGGTGCTTGAAGGTGTGTCTGTTCTTGCTAATCAGATTAGTGTCTCATCTTCCCCTTTATCTGTAGAATCTAATTGCATTAGACTTAGCATAACTCTGGTAATGATTTACCCATCACATGTACAGCGCCACCCCCTTCCCCTTTCCCCCAAATCTCTGCTGCTTCATTTCTCGATCTTCATCAGGTTGATTTTGGTTTTTTTAGGTTTGTCAATGGAGAACTTGGATGGAAAATCTTCAGATTCTACGCAATGCGTTCGCGTTGCTGTTAATATCAGACCTTTGATTACACCCGAGCTAATGGTTGGATGCACGGATTGTATTACAGTTGTGCCTGGCGAACCTCAGGTTCAAATTGGCTCACATGTATTCACATACGACAATGTGTATGGTAGTGCTGGATCACCATCTTATGCATTATACGACGATTGCGTTGCTCCACTAGTCGATGCATTATTTCAGGGTTATAACGCTACTGTTCTTGCTTATGGACAGACGGGGTCTGGAAAGACTTACACAATGGGGACGAATTATAGTGGTGAAGGAAGTAATGATGGAGTAATACCCAAAGTAATGGAAAAAATATTCAAAAAGGTCGAGACAAAGAAGGATTCTACCGAATTCTTGATCAGAGTATCATTTATTGAGATATTTAAGGAAGAAGTCTTTGATTTGCTTGATGCAAGTACTTGCCTTAACACAAAGGGTGAAGGGACAAAGCCTTTTGCTCCTCCACGAGTTCCAATACAAATACGAGAAACGGTTAATGGTGGAATCACACTTGTTGGCGTCACCGAGGCCGAAGTTCGCACCACAGAAGAAATGACATCTTACTTGTCTCGTGGTTCATTAGCACGTGCAACTGGAAGTACCAACATGAATAGCCAGTCAAGTCGATCACATGCCATATTTACTATTACCATGGAGCAAAAGAAGAAGCTTGGGCGAGGCATGTCTCATGATGATACATGTGACGACATTCTATGTGCTAAGCTCCACTTGGTGGATCTTGCCGGTTCTGAAAGAGCCAAACGAACAGGTGCTGATGGCATGCGCTTTAAAGAAGGCGTTCATATCAACAAGGGCCTTTTGGCACTTGGCAATGTCATAAGTGCATTGGGAGATGAGAAGAAACGAAGAGAAGGATGTCATGTTCCCTACCGTGATAGCAAGTTAACACGTTTGCTACAGGATTCTCTTGGTGGCAACAGCAGAACAGTGATGATTGCTTGTGTTAGTCCTGCTGACTCAAATGCAGAGGAGACCTTAAACACGCTAAAATATGCTAATCGTGCTCGCAATATTCAAAATAAAGCAGTTATCAACCGAGATCCTGTAGGAGCTCAAATACAAAAAATGCGAAGTGAAATTGAGCAATTGCAAGCTGAGCTTTTATTCTATCGCGGTGATGCAACTTTACCATATGAGGAGCTGCAGATTCTAAAGCATAAAATATCATTACTTGAAGCAAGCAATGGAGAGTTGTTGCGGGAGCTTCAAGAACGTCGAGTCACTTGCGACCATTTGTCTCAGCGTGCTATTGATGCTCAGGTTGAAAAAGACAAACTTGCCATGATAATTGAATCCGTGCGGAATGGCAAATCTTTAGATGAGATTGAATCCAACTACGATAAGGATTGTGAATTGGTCAAGAGTTATGTTTCAAAAATTCAAGAGCTAGAAGGGGAGGTACTGAGATTGCAAAGCTTTAAGAGTTCAAAACACAGCCGATATGTAGATCTTGTGGAGTCTGATGATGATAGGCCGCAGTCTAGTAACATCTTATTTCCATGTTCAAATGAGCATTCGTTGGAATATGATCCCAAAGCTGTAGATATTTCAGATGGAATGGAAGATCATGAAAAGGAGCTTGAACATTCAACAATGCAAGAACGATTAGACAGGGAGCTAAAAGAATTGGATAAGAAACTTGAGCAGAAGGAGGCTGAAATGAAACGGTTTGCTGGTACGGATACCTCTGTTCTAAAACAACATTATGAAAAGAAGGTCCATGAATTGGAACAAGAAAAGAGAGCTTTACAGAAAGAGATCGAGGAACTTAGATGTAATCTTTCGAACATATCTTCTACATCTGATGATGGAGCGCAAAAGTTGAAGCAAGAATATCTGCAGAAACTAAATTTCCTAGAGACTCAGGTCTCGGAGTTGAAGAAGAAACAAGACGCTCAGGCTCAACTATTGAGACAGAAGCAAAAGAGTGATGAGGCAGCAAAAAGATTACAGGATGAGATCCACAGAATTAAGACCCAAAAGGTTCAACTTCAACACAAGATTAAACAGGAATCCGAGCAATTTAGATTATGGAAGGCTTCGAGAGAGAAGGAAGTTCTCCAGCTGAAGAAGGAGGGTAGGAGAAATGAATATGAGATGCACAAGCTCTTAGCTTTGAATCAAAGGCAGAAAATGGTCTTGCAACGAAAGACAGAAGAAGCCGCTCAGGCAACAAAAAGGCTTAAAGAGCTTTTAGAATCTCGAAAGGCAGCACGTGAATCTTCCGGTGGGGGATCAAATGGTCCTGGAATTCAGGCTCTAATGCAGAATATTGAGCACGAGCTTGAAGTTACAGTTAGGGTGCACGAGGTTCGTTCTGAATACGAACGTCAAATGGAAGAGAGGTCTAAAATGGCCAAGGAATTGGCTAAGCTTAAGGAGGAAGAAGATTTACACAGAGGAGCTAAGTTGAGTGATTGTACTCAAACAATGTCACCTGGTGCAAGAAATTCAAGAATTTTTGCCCTCGAAAACATGCTCGCTACATCATCCAGCTCTTTGGTTTCCATGGCTTCACATTTGTCAGAGGCAGAAGAGCGTGAGCGCGTTCTTGGTGGTAGGGGACGTTGGCATCAAGTGCGATCTTTAGCCGATGCAAAGAACATTATGAATTTTTTGATGAATTTAGCATCCTCTTCAAGGTGTTTGCTATGGGATAAAGAGTTTGCTTCTAGAGAGAAGGATTCAGAAATTAGAGAATTGAAACAAAAAATAGTGAATCTTAGTGGCATGCTGAAAAAATCAGAAGCGCAAAAGGCAGAACTTATTCATCAGAACTCGGTTTTGAAAAGATGTTCCCCGGTTAATAGCGGGGGGCATAACTACGATTTACGCAAGCAGGAGCATCGAAATTCTGTCGTCATACCTGCGGACATGGATACATCAGAATCAGATTATGCAGATCTTAGTTCAGATAGCGACGATATTAATTATGATTGGGAGAGATCCATGAAACGACGATTTGATAGGAAAAAAGTCTCTAAAGCTAAGGGTCGTTCAAGCATGGTTGTCTTAGATGGCAAAAATAGTACAGAGTTTAACTTGGATAGTTCTGGCGATGGGGTACTTCGTGGGAATGAATCCACTGCTAGCACCATTGTTTGTTGTACTTGTAGCAGATCTTCTTCCTGCAAGACAACAAAGTGCCAATGTAGAGCGAATGGTGGTGCTTGTGGCTTGTCATGTGGTTGCATACCATCAAAGTGTTCAAACAGAGGTAGTAAAAGTGACCGGGACGCATCATTGCAACTGGATTTAACCAGGAATGTTCGAAATGCTATGGAAAACGATGAAACCGATGAGGAGAGTCGTGACCTTGTTTCTCATGGTGCAAGGTTGCTTCAGAATGCATTGGCTGAGAGACCAAGTGACGATGCTCCTCCAGCTGAAGATGGTGGCGCAAAAAGAAAGCCTCTATCAGACATCGGAAACACATTGGTGAAATCAAAGACAAACAAGCCAAACCAGAGAAAGAAATGGCGAAAATCTACCATTCAACTGATTCCAACCCCACAAGCATCTTCCCAACCAGAAAAACCCGAAGCCACCCAGAAGACTGAGAATGATTTGAATGAGATTGTCAACGTCCCATTGAAACTTCCCCGAGCTATGCGATCCGCTGCTGCGAACGGCGGGAACCTACTGAGAGAAAGAAACTCCGATCAGCTGGAAGATTCGGTCAGCGGAAACAAAGAGCATGAACTTATTGTTCCAAAAAGAGTGGATGAGAAAGAGAACTGCAACCGTTAA 4104 42.32 MLLGAIVLILVSHWVKNLKALVVLEGVSVLANQISVSSSPLSVESNCIRLSITLVMIYPSHVQRHPLPLSPKSLLLHFSIFIRLILVFLGLSMENLDGKSSDSTQCVRVAVNIRPLITPELMVGCTDCITVVPGEPQVQIGSHVFTYDNVYGSAGSPSYALYDDCVAPLVDALFQGYNATVLAYGQTGSGKTYTMGTNYSGEGSNDGVIPKVMEKIFKKVETKKDSTEFLIRVSFIEIFKEEVFDLLDASTCLNTKGEGTKPFAPPRVPIQIRETVNGGITLVGVTEAEVRTTEEMTSYLSRGSLARATGSTNMNSQSSRSHAIFTITMEQKKKLGRGMSHDDTCDDILCAKLHLVDLAGSERAKRTGADGMRFKEGVHINKGLLALGNVISALGDEKKRREGCHVPYRDSKLTRLLQDSLGGNSRTVMIACVSPADSNAEETLNTLKYANRARNIQNKAVINRDPVGAQIQKMRSEIEQLQAELLFYRGDATLPYEELQILKHKISLLEASNGELLRELQERRVTCDHLSQRAIDAQVEKDKLAMIIESVRNGKSLDEIESNYDKDCELVKSYVSKIQELEGEVLRLQSFKSSKHSRYVDLVESDDDRPQSSNILFPCSNEHSLEYDPKAVDISDGMEDHEKELEHSTMQERLDRELKELDKKLEQKEAEMKRFAGTDTSVLKQHYEKKVHELEQEKRALQKEIEELRCNLSNISSTSDDGAQKLKQEYLQKLNFLETQVSELKKKQDAQAQLLRQKQKSDEAAKRLQDEIHRIKTQKVQLQHKIKQESEQFRLWKASREKEVLQLKKEGRRNEYEMHKLLALNQRQKMVLQRKTEEAAQATKRLKELLESRKAARESSGGGSNGPGIQALMQNIEHELEVTVRVHEVRSEYERQMEERSKMAKELAKLKEEEDLHRGAKLSDCTQTMSPGARNSRIFALENMLATSSSSLVSMASHLSEAEERERVLGGRGRWHQVRSLADAKNIMNFLMNLASSSRCLLWDKEFASREKDSEIRELKQKIVNLSGMLKKSEAQKAELIHQNSVLKRCSPVNSGGHNYDLRKQEHRNSVVIPADMDTSESDYADLSSDSDDINYDWERSMKRRFDRKKVSKAKGRSSMVVLDGKNSTEFNLDSSGDGVLRGNESTASTIVCCTCSRSSSCKTTKCQCRANGGACGLSCGCIPSKCSNRGSKSDRDASLQLDLTRNVRNAMENDETDEESRDLVSHGARLLQNALAERPSDDAPPAEDGGAKRKPLSDIGNTLVKSKTNKPNQRKKWRKSTIQLIPTPQASSQPEKPEATQKTENDLNEIVNVPLKLPRAMRSAAANGGNLLRERNSDQLEDSVSGNKEHELIVPKRVDEKENCNR 1367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26804201 26818323 + CmPI595203_11g014580.1 Cmu11g1458 429980

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1458 1367 Coils Coil 684 718 - -
Cmu11g1458 1367 Coils Coil 647 678 - -
Cmu11g1458 1367 Coils Coil 886 913 - -
Cmu11g1458 1367 ProSitePatterns Kinesin motor domain signature. 351 362 IPR019821 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)
Cmu11g1458 1367 Gene3D Kinesin motor domain 101 490 IPR036961 -
Cmu11g1458 1367 MobiDBLite consensus disorder prediction 1279 1308 - -
Cmu11g1458 1367 Coils Coil 727 792 - -
Cmu11g1458 1367 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 489 IPR027417 -
Cmu11g1458 1367 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 101 1342 IPR027640 GO:0003777(PANTHER)|GO:0003777(InterPro)|GO:0005875(PANTHER)|GO:0007018(InterPro)|GO:0007052(PANTHER)|GO:0051231(PANTHER)
Cmu11g1458 1367 Pfam Kinesin motor domain 139 456 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cmu11g1458 1367 ProSiteProfiles Kinesin motor domain profile. 106 456 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cmu11g1458 1367 MobiDBLite consensus disorder prediction 1336 1367 - -
Cmu11g1458 1367 SMART kinesin_4 104 464 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cmu11g1458 1367 MobiDBLite consensus disorder prediction 1327 1367 - -
Cmu11g1458 1367 FunFam kinesin-like protein KIN-4A isoform X1 99 484 - -
Cmu11g1458 1367 CDD KISc_KIF4 106 457 - -
Cmu11g1458 1367 Coils Coil 471 491 - -
Cmu11g1458 1367 Coils Coil 1016 1036 - -
Cmu11g1458 1367 PRINTS Kinesin heavy chain signature 312 329 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cmu11g1458 1367 PRINTS Kinesin heavy chain signature 352 370 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cmu11g1458 1367 PRINTS Kinesin heavy chain signature 406 427 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cmu11g1458 1367 PRINTS Kinesin heavy chain signature 176 197 IPR001752 GO:0003777(InterPro)|GO:0005524(InterPro)|GO:0007018(InterPro)|GO:0008017(InterPro)
Cmu11g1458 1367 SMART CXC_2 1149 1193 IPR033467 -
Cmu11g1458 1367 Coils Coil 832 859 - -
Cmu11g1458 1367 MobiDBLite consensus disorder prediction 1236 1308 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1458 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu10g2610 Cmu-Chr10:32873800 Cmu11g1458 Cmu-Chr11:26804201 9.60E-63 dispersed
Cmu10g2825 Cmu-Chr10:34787032 Cmu11g1458 Cmu-Chr11:26804201 1.40E-43 dispersed
Cmu11g0402 Cmu-Chr11:4441382 Cmu11g1458 Cmu-Chr11:26804201 6.50E-56 dispersed
Cmu05g2076 Cmu-Chr5:30406556 Cmu11g1458 Cmu-Chr11:26804201 9.80E-260 transposed
Cmu01g1783 Cmu-Chr1:31536308 Cmu11g1458 Cmu-Chr11:26804201 1.40E-29 wgd
Cmu11g1458 Cmu-Chr11:26804201 Cmu08g1105 Cmu-Chr8:23379548 6.10E-52 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g515 . . . . Bpe02g00139 . . . . . Cma01g01646 . . . Sed05g1562 . Cpe07g00170 Bhi04g01382 Tan02g2480 Cmetu04g1739 . Hepe10g0431 . Lcy13g1480 . . . . . . . Cone4ag1297 Cone7ag0858 . . Lsi04g02279 Csa03g04492 . . . . Bda11g00799 . . . . . . Cmo01g01696 . . . . . . . . . . . . . . Cla11g01423 Cam11g1479 Cec11g1509 Cco11g1505 Clacu11g1640 Cmu11g1458 Cre11g1876 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009556 2 1 1 1 1 0 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 2 1 1 32