Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1465 ATGCCGCATAGAACGACTTACTTCTTCCCCAGGCAATTTCCGGATCGCGGATTTGACTCGGCGTCAACCTCCAAACACATTTTGGATCACGAGAAGAAAATCAACAAAGACACTTTTAGTACCGAAAGCGACGCGAAACCGACCCCGAGGCCAGCGCGCGACTTTAGCGTCACGAAGAGTTCGGCTGTATCGGATCTTTTCACGGGGGACAAGGCTCAAAGCAACAAGAAACTGCCTGCTTTTTACGATTGGTTGGTGGACAAGAAAGCAACGCGATCGGCATCAGCTCACGTGAAAACTTGGCTTTCCAACTGCGACGAGGACCGCGAGCTTTTGCTTCCGCCACCTACCTCGGAGCCGGAGCATGATACATCGTCGGTTAAGGATCGGAGTGTTGACCGGAACTTTGACCGGCAAGTTTCACTGCCTAGAGTATCAAGCGAGAGTAGCTATGCGGGGAGTTTGTTTTCAGGCACGGGAACGGGGACAGTGGATGGAAACTTTTCCAGCGACGTCAAGGATTCATCGGCGTCAAAGATATTATCCTCGCACCCGGCGAAGCCGGAAGAGATTGAGGCTGTAGATGGTAAGGAAAGCATAGCACAGAGAGCGAAAGAGAGTTATTACCTGCAACTTGCTTTGGCTGCATCGCTTCGTTCCCATGCTAGTCTGGCTGGCGATCCTGTGCTCATGGAGGAATGCAGGATGGAAATTACGGACGCTGAAACTGTTTCTTATCGACTTTGGGTAAGTGGTTGCCTGTCCTACTCCGACAAAATATCAGATGGTTTCTACAATATTCTGGGTATGAACCCGTATCTCTGGGTTATGTGCAATGGTTTTGAGGAAGGTAGACGGCTACCTCCTCTGATGTCGCTTAGAACCATTGAACCAAGTGAGACGTCAATGGAGGTGATTCTTGTGGATAGACATGGGGACTCTCGACTGAAAGAGCTTGAAGACAAGGCACAGGAACTATATTGTGCTTCAGAGAGCACCTTAGTGTTGGTGGAGAAACTAGGAAAGCTTGTTGCGATCTACATGGGGGGCACTTTTCCGGTGGAGCAAGGGGGGTTGCACCTACATTGGAAAGTGGTGAGCAAAAGATTGAGGGAATTCCAGAAATGCATTGTTCTTCCAATTGGTAGTCTTTCTATGGGACTATGCAGGCACCGTGCAATCCTTTTCAAGAAATTGGCAGATTACATAGGTTTGCCATGTCGGATAGCTAGAGGTTGCAAGTACTGTGTTGCAGATCATCGATCCTCTTGCCTTGTCAAAATTGAAGATGACAAGAAATCGTTGAGGGAATATGTAGTTGATTTAGTGGGGGAACCGGGAAATATACATGGTCCAGATTCCTCAATTAATGGAGGGTTCCAATCGTCAATGCCTTCACCGCTCCACATTTCTCATTTAAAAGAGTTTCAAGAACCTTACGTGGAAAGTTATCTCAATCATCAAACTGTTGGGTCAAAGCAAATCTGTGGATTTCCTGAAAATCCTCTACGTTCAGGTTATGGAGAGTACCAGATGAAAGGGGGAAGCACTTTACATAGGAGTTCAGGGGCTGAAACTGATAAATTGGTTGATCAAGCTTGTATGGGTATGAGATCAACTCAGTTCTGTGTGGAGACAAAATTGAGCAAGGAGTGTGTGCTTCAGAGTCATATAATGCCACCCACTGGTGCTGATGCCGCCGAGGTGTTGAGTTCTGTTGGCACTGAATCTTTACGTGAAAACAAAGTTGTCATTGAAGAAATATACCAAGAAGAGGCGGTTGTGGCGGGGATTTCGCTGAATGAAACTAGCATTAATCCATCCAAATTAAGCTTGTCAACTCAAACTGCCTCAAAGGAGGTTGAGGGTAGGTCTCAAAATTGTTCAGCATCAACATATCCGAAATATCTGACGCTTGAACCTTCACTTGCAATGGATTGGCTGGAAATTTCATGGGATGAACTACATATAAAGGAGCGTGTCGGAGCTGGCTCCTTTGGTACAGTGCACCGTGCTGAATGGCATGGATCGGATGTTGCTGTCAAGGTTCTAACTGTGCAGGATTTCCATGATGATCAGTTGAAAGAGTTTCTAAGAGAGGTTGCAATAATGAAGCGGGTGCGCCATCCGAATGTGGTACTCTTTATGGGTGCAGTTACAAAGCGACCTCATCTTTCAATAGTGACTGAATATCTGCCCAGGGGTAGTCTATACCGCCTAATCCACAGGCCATCTTCTGGTGAATTGATGGATCAAAGGAAACGATTGCGCATGGCATTGGATGTGGCAAAGGGAATCAACTACCTACATTGTCTCAATCCTCCTATAGTACACTGGGATCTTAAATCCCCTAACTTGTTGGTTGACAAAAATTGGACGGTGAAGGTTTGTGATTTTGGGTTGTCCAGATTCAAAGCAAACACTTTCATATCATCGAAATCTGTTGCTGGAACGCCTGAGTGGATGGCTCCGGAATTCCTTCGTGGAGAGCCCTCAAATGAGAAGTCTGATGTCTACAGTTTTGGAGTGATCCTCTGGGAACTAGTAACCATGCAACAACCATGGAGTGGGCTCGGCCCGGCTCAGGTCGTGGGAGCTGTCGCTTTCCAGAATAGAAAGCTTTCTATCCCACCAAGTACTTCTCCATTGTTGGCTTCCCTTATTGAATCTTGCTGGGCAGATGATCCTGTTCAGCGCCCATCCTTCACAAGCATCGTCGAGTCCCTAAAGAAATTGCTGAAATCTCCACAGCAGTTGATAGCCATGGGTGGAACGAATGCAGAATCTGCATCGATGACTTTAGCGGAAGAACTGATGAGGTCTTATGAACGTCAAGGATGTGAAATACTGTAA 2853 46.65 MPHRTTYFFPRQFPDRGFDSASTSKHILDHEKKINKDTFSTESDAKPTPRPARDFSVTKSSAVSDLFTGDKAQSNKKLPAFYDWLVDKKATRSASAHVKTWLSNCDEDRELLLPPPTSEPEHDTSSVKDRSVDRNFDRQVSLPRVSSESSYAGSLFSGTGTGTVDGNFSSDVKDSSASKILSSHPAKPEEIEAVDGKESIAQRAKESYYLQLALAASLRSHASLAGDPVLMEECRMEITDAETVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNGFEEGRRLPPLMSLRTIEPSETSMEVILVDRHGDSRLKELEDKAQELYCASESTLVLVEKLGKLVAIYMGGTFPVEQGGLHLHWKVVSKRLREFQKCIVLPIGSLSMGLCRHRAILFKKLADYIGLPCRIARGCKYCVADHRSSCLVKIEDDKKSLREYVVDLVGEPGNIHGPDSSINGGFQSSMPSPLHISHLKEFQEPYVESYLNHQTVGSKQICGFPENPLRSGYGEYQMKGGSTLHRSSGAETDKLVDQACMGMRSTQFCVETKLSKECVLQSHIMPPTGADAAEVLSSVGTESLRENKVVIEEIYQEEAVVAGISLNETSINPSKLSLSTQTASKEVEGRSQNCSASTYPKYLTLEPSLAMDWLEISWDELHIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFHDDQLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLPRGSLYRLIHRPSSGELMDQRKRLRMALDVAKGINYLHCLNPPIVHWDLKSPNLLVDKNWTVKVCDFGLSRFKANTFISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWSGLGPAQVVGAVAFQNRKLSIPPSTSPLLASLIESCWADDPVQRPSFTSIVESLKKLLKSPQQLIAMGGTNAESASMTLAEELMRSYERQGCEIL 950
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 26872969 26882177 - CmPI595203_11g014650.1 Cmu11g1465 429987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1465 950 SUPERFAMILY Protein kinase-like (PK-like) 629 908 IPR011009 -
Cmu11g1465 950 FunFam Serine/threonine-protein kinase CTR1 734 919 - -
Cmu11g1465 950 MobiDBLite consensus disorder prediction 27 57 - -
Cmu11g1465 950 PANTHER SERINE-THREONINE PROTEIN KINASE 217 913 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cmu11g1465 950 Pfam Protein tyrosine and serine/threonine kinase 655 909 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1465 950 Pfam Ethylene-responsive protein kinase Le-CTR1 241 449 - -
Cmu11g1465 950 CDD STKc_MAP3K-like 661 909 - -
Cmu11g1465 950 ProSiteProfiles Protein kinase domain profile. 655 913 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1465 950 SMART serkin_6 655 913 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu11g1465 950 FunFam Serine/threonine-protein kinase isoform 1 645 733 - -
Cmu11g1465 950 MobiDBLite consensus disorder prediction 109 137 - -
Cmu11g1465 950 Gene3D Transferase(Phosphotransferase) domain 1 734 921 - -
Cmu11g1465 950 ProSitePatterns Protein kinases ATP-binding region signature. 661 682 IPR017441 GO:0005524(InterPro)
Cmu11g1465 950 PRINTS Tyrosine kinase catalytic domain signature 880 902 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1465 950 PRINTS Tyrosine kinase catalytic domain signature 770 788 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1465 950 PRINTS Tyrosine kinase catalytic domain signature 836 858 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1465 950 PRINTS Tyrosine kinase catalytic domain signature 729 742 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu11g1465 950 MobiDBLite consensus disorder prediction 109 145 - -
Cmu11g1465 950 Gene3D Phosphorylase Kinase; domain 1 648 732 - -
Cmu11g1465 950 ProSitePatterns Serine/Threonine protein kinases active-site signature. 776 788 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu03g1027 Cmu-Chr3:4825541 Cmu11g1465 Cmu-Chr11:26872969 6.20E-49 dispersed
Cmu04g1017 Cmu-Chr4:24758307 Cmu11g1465 Cmu-Chr11:26872969 2.70E-173 dispersed
Cmu05g1823 Cmu-Chr5:28327169 Cmu11g1465 Cmu-Chr11:26872969 3.90E-114 dispersed
Cmu09g1359 Cmu-Chr9:20537076 Cmu11g1465 Cmu-Chr11:26872969 5.40E-40 dispersed
Cmu11g1140 Cmu-Chr11:21537769 Cmu11g1465 Cmu-Chr11:26872969 5.00E-42 dispersed
Cmu11g1262 Cmu-Chr11:24628751 Cmu11g1465 Cmu-Chr11:26872969 8.60E-48 dispersed
Cmu11g1465 Cmu-Chr11:26872969 Cmu08g1295 Cmu-Chr8:25209838 4.70E-35 dispersed
Cmu11g1465 Cmu-Chr11:26872969 Cmu10g2661 Cmu-Chr10:33407916 1.90E-174 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75946 PF07714 PK_Tyr_Ser-Thr 6.20E-64 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1465 - - - 0.0