Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu11g1573 ATGGCGGCAACGGATCGTCGTCGAAAATTCCGGATTTCCTTTCGTGTTCGATCACCAACCGGCGGAACTAGTGCTTGTTTTTTCTTCTCGGAGTCTATTTCATCGGCGGCGAGTGATTTGGTTGCGCTCTGCGCTTTCCGATTCGTTGATCAACATCGTAAGTATCTCATCCAGCCGATTGTTGAGTACGTCTCGCAAACAGAGTTGAAATACAGTGGGCGTAACTGTAAAATGAAAACTTCTGATGCATCTTTGTTCAGCATATTCTTCAAACATAAGGATAAAGGTTCTACATCCAATGATGAGTCAGAGGACCTTGGTGATGTTCTTGACAGTGAGGTGAACTCTTACCTAAACAATAGGAAGGAGACACATTATAAAAAGATTATTTGGGAGCAAATTAACAAAGACTATCTTCAGGACCAAGCAGCTAAGAAACTAGGTCGTGATATTGTTGGAGCTGCAGCTGTGGTTAAAAAATCAAAGAAGAGGCAAAGGAAAAAAGAGGCTCCTATAAACAACCCTGCTCAAGCTGATACAGAAGCTTCGCGTGAAATGCTTACTAAGAAGAGGCTCAGTTCAAAATTCAACTTCGACGTGTTGGACAAGCTCTTCTCCGATACACCTGCACCTGATTCAAGCAAAAAGCAGGGAGTCTCAAGTTGTAAAGAAAATAGTTCATTGAAACAAAGCCATCAAAGCCATTGTAGTTACCAGCTTGAAGACGACCTTGAAGACAATCATACGGACACAATGTTAGAAGAAAACATCGACATTGAGGGTGAAGATCCCACAGAAACTTATGGGAATGAGTATTATGATTTCGAAAACGAGGAAGAGTATGTCTATGGATACGATTTAGGAAACTGCAAAGTCAATGCTTCTCTTTTTCTTTCCTCTCTTGGAAGGAGAGCACTGGGCAAAAGTTCATCAAAGAAGAAAGAAAACCGTAAGTTGATCATTCTCCAAGGGAAGTATCCATTGCACACTCATGGCTTCAGATTATGCGTTGAAGGTCCCTGCCGAACTAGAATCAGCTTTGCGGTTAAAGAGTGTTCAGTACTTCATTACAAAAAGGCCGTGGCTTGGTGTTGTATTTCAGATCTCTATGGGGTTAATGTTAGACCCATTGCGCCATTTGGAAGTTCGAGTCGGCAGCCATTTGTTGATCCAGCATTAATACATCGCAGCTTGCCAGATGAGTTATTGTTTGAGGTCTTTGCCAGAATGGCTCCTTATGACTTGGGACGGGCATCATGTGTCTGTCGAAAATGGAGATATACTATTCGGAATCCTGTATTCTGGCGTAGTGCTTGTTTGAAGGCTTGGCAGCTCTCTGGTGTGGTTGAAAACTACAAGTTTTTGCAGTCTATGTATGATGGATCATGGAGAAAAATGTGGCTTTTACGACCAAGGATCCGCACTGATGGCCTTTATGTTAGCAGGAATACTTATATACGTGCTGGGATTGCAGAGTGGAAGATTACCAATCCAGTTCACCTGGTCTGCTATTTCCGTTACATCAGATTTTTTCCTTCTGGGCGGTTTCTCTACAAGAATTCTTCACAGAAGATTAAGGATGTGGCTAAGTGCATGAATTTTCGTGCTTCGAAAGCTGACTGTATTTTTGGTGGACACTATACCTTATCAGATGATAAGGTTGAAGCAGCTGTTTTGTACCCAGGTGCTCGTCCTACTGTGCTCAGAATCCGGATGAGGCTAAGAGGAACGTCAACAGGGGCTAATAACCGAATGGATCTATTAACCCTTGTTACCAGTGGTATGAATAACAATGAGGTTGGTGATCCTGAAGAAGATATCCTTGGCATAGTGGAAAGGTGGCGAGACGATGAAACACACAACCCGGACGTGCCTGCAGTTTCTCATAAGCGGGGTCTGACACCTTTTATATTTGTTCCTTTTGATCAGGTGGAAACATCAGAACTAAACTTGCCTGTAGATAAGATGGACTATTTTGTACCCGAGTTTGCTGATCTTCATCTACACAAGCGGGCGATTTCGGGCGACAACCGGAGTGTTGCGGCGGAGCTAGGACCGGGCGACGGCGGAGCTGCAGGTACACGGCGGCGCATGGATAACTCTTCGCTGCAACTCATCCGCGACGTCGGAACTAAATTGAGCAAACATTCTCGCCCAACCAAGGATTTCATCATCAAATCCCTCCGACAAGTTGTAGATGCTTTTGCATGTTTGGAACAGTCGTACGTCTCAGATGGTAGATTGAAGTCAGAACCAGCTAAGAAATTGGAGGGTTGTACAAAGCCTCTAAGGAATTCTATAATTAATGGCCTTCTACGGAATAGAGATAAAGATGTGAGACTTCTATTAGCTATATGTGTTAGTGAAATTTTCCGGGTCATGGCACCAGAACCACCTTTCGAAGACAAATATCTAAGGGATGTTTTTATGCTTCTTTTGAGTTCTTTTTCTGAGCTAGCGGATACGACAAGTTCACTTTTCTCTTGGAGGGTTAAAATACTAGAGACAGTGGCACGATGTAAATGTTGCGTGATAATGCTTGACATTGGATGCAATGACTTGGTGTTGGAGATGTTTAATACATTTTTCTCTGTTTTGAGAGACTATCACGAGCCCAGTTTGGTTAACAACATTTTGTCCATAATGACCCATATTCTAAGTGAGGATGCCTCTCCACCACTTGTAGATGTTGTTTTGCATAATCTTGTAAAGGAGGAAAAGGGTGAACCCACAGCTGCTTCTCGCCTTGCGGTTTCCATAATTGGAACTTGTGCTGAGACGCTTGAACCACTAATTTGTGGATTCTTAACATCTTGTATTTCAGAGAGAGATGTCGTGGGGAGTGAACTCAAAGAATTTTACCATGAAATAATTTTTAGAATTTTCCAATGTGTCCCTCAAATGCTTCTTCCTGTGATTCCAAACTTGACTCTGGAACTTTTGACGGATCAGGTCGATGTTAGAATAAAAGCAGTTAAAATCATTGGCAGACTTTTATCGCTACCTGGACACTGTGTAGCACAGAAGTACCGAGGACTTTTTATGGAGTTCTTGAAAAGGTTTTGTGACAAGTCTGCAGAAGTTAGAATTCATGCAATCCAATGTGCTAAAGATTGTTATATGGCCAATCCTGATTGTTCAGAATCTATGGAAGTTCTTGCTGCAGTAGAAGAACGATTGTTAGACTTGGATGATAGAGTAAGAACACAAGCGGTAATTGTTGTTTGTGATATTGTCCGATCAAATATCAAATTTGTTCCACCAACACTAATATCTCAAGCTGCTGAAAGACTACGAGATAAGAGGATATCAGTTAGGAGAAAAGCTCTTCAGAAATTGTTGGAAGCATATCGAGATTATTGTGATAAATGTTCTAAAGGCCAATCAACTATGAACGATGCCTTTGAACAGATCCCATGTAAAGTCTTGATGCTTTGCTATGATAAAGATTGTAAGGAGTTCAGGTCCCAGTGCATGGAACTTGTTCTTGTGGAAGATTTATTCCCAGCTGAACTCTCCATTGAGGAAAGAACTAGACACTGGATTCGTTTATTCTCTCTTTTCAATAACCATCATGAAAAGGCCCTCGGATATGTTTTGCTGCAAAAACAGAGGTTACAAAATGAGCTGCGGACTTATTTGGGCCTACGAAAAAGGGACAAGGAGAACCAATCAGAAGAAATGGAAAAGCAAATTGAAACTGCATTTGTCAGAATGGCAGCCTGCTTTCCAGAGCCTACAAAAGCAAAGGAGTCCTTTTATAAATTAAATCAAATTAAAGATAATACTATTTTTAATTCTTTGGAGCTTTTACTTGACCAGTTGACAATTGTTGAAGCTCAGGCCACCAGAGACAAATTGCTGAGGATGATAGGAAGTAAACAGCCTCATTTTGAGTTTTTGAAATCACTCTCCTCAAAGTGCTCGTATAATTTATTCAGCACAGAACATATACACTTTGCATTAGACTGCATTTTGAGTGACAGACTTGGAAACAGACATTTGGAGGGTCCTACTGGCAAGCTTCTACTGGCTATTATCAGCATTTTCCCCTCACTCATCAGAGCCTTGGAAGGTCGACTGCTGAGGTTGTTGGAAGAAAGCAATTCAATTGATAGTAAGCTGATCGACGTATTGTCAAAAGCAGGCCCTCATTTATCAATTGAACTCAGGGATGTATACCCATTTCTGGAGAGGCTATGCTTGGAGGGTACTCGTGCTGAATCAAAGAGCGCTGTTTCTGCCATTGCAGCTTTAGCAAGTACTTCTGATTATTTTTGGTTCTCTAAACTATGTAAGGGACTTGTTGCTTCTCTACACAGGGGAATGAATCTCCCAACAGTACTTCAATCTTTAGGTTGTATTGCAAAATATTCTGTTTCAACATTTGATGATCACGATCAGGATGACGGGATCATATCTCATATATATGAGAAAATCTTCCATGTGGACTTATCAGATAATTTAAGTGAATTAGATGGTGATGCTGCTGGCAGCGATTCTAGGGATTTAAAGATTTATGGGTTGAAAACCCTCGTTAAGAGTTTTTTGCCGCATCAAGGGACTCCTAGAAGAAATGTTGACAAGTTTCTGAACGTTTTATCTCGGATGCTGAATATGTGTGAATCTTCTGTTGACATCATCCCTACTGAGGGTGATCAGGCTCGAATCAAATTAGCTGCTGCAAAATCAGTTCTTCGTCTTGCCAGAAGATGGGATTTACAAATTGCACCAGAGATTTTCCGTTTGACTATCCTGATGGCAAAGGACCCGTCTTATAAGTCTAGAAAGCAATTTATTGACAAAGCACACAAGTTACTAAAGGAGCAGGCTATACCTACTCGTTATGCTTGTGCTTTTGCGTTTTGCTTCTCGGATAGCATGAAAGATCTTCGGGATGATTCACTTAAATATATGGCAGAATTTATTGAGCAATACAGTAAGAGTGCACAGATTCATCAAACTTCTGTGGCTCAAGATGGGTCAATGACTTTTGCCCCAGCGTATATAGTAGTATTCTTGGTATATATTCTAGCTCATGATTCAGGCTTCCCACATGTGGACTGTCAAGATGAAAATGTATATGCTCAATTTTGCAGGCCATTCCTATTTGTGTTGCAGATGTTATTTAATGCAGATGTAAGTGCTTCCAAAGATACTGTTTTGTATTTGCACAGTATTTTTCGTGCCATTAGGAGGGTTGAGGATGCTGTGGATATCGAAATATCACCTAAGTTGCACATCTTGGCGGACATCGGACTCTCTTTTGTAACTTCTCTAAATTCTTCTGGAGTTTCCCTGACATGTGCTCCAAAGCAGATTTTGCTGCCATTATCTCTATATAGAGTAACCTCCAGGCAGCAATCTCGATATGCTTATGATGAATGTCTCGTTGGAAGAGTTATTAAAGCATTTCAATCACAAACCTTTTTGCCCGCTAATACTTCTACAAGAGGTGATCAAAAGTGCTTGGAGGGTATCATGCAAACAAACATCAACCCGTGTACCTCAATGAGCATGAGAGCTTGTGAGCAAGTTGAAACCATTTCCTCCAGAGCAACGAAGATAAAAAAAACTGTGAATCAGGAGACTATTGTTGGACAGAAGCGAAAACGGGCAGTCTCTCCAACAACATCCACATCAATTGAGTTGCGTGAATGTTCTCAAGTTATTCGACAAAATTTTCCAACAAAAAGAGAAAAAAGTAAATTTTCTTCTCGATGTGAAACTACAGAGGATCCTCTGCTTGAAGCAGATGTGTCAATCCAGCGTGTAGATATGAATGTAACTTCTCAGGACAATGTGTTGGCAAAGAACAGTTTGGAGGATGCGTCCTCAATGTTTATCAACGACCAGCTTAATGATCCTTGCAGTATGAAGCGTGGAATTGGAAGTTACCGCCATTGTTCTTTTGATCTTCACGACCATCAAAAGGGTTTGAAATCTTCCTCAACACCTCTGAAATTCCCACCATTCTCAGCCTCCATCGCCGGATTTTGCTTCAGAGCTCCATTTTTAGGTTTACAGGCGGAGCCTCCCTCTTATCATGTGCGCTTCTCCATGGCGAACTTGAGGACCGACTCTCCAGTCTCTTCTCGCATCGTTCGTGCCTTTCTTGACTTCCTTAACTCTGTGGAACCTGGTCCAGGTGTTGATGTTGAAGGCCTCGAGGTCGCAAAACAATGTTTAGAACAAGTGTTTAAAGTTGAGTCTCCTGCTGCCGATGAGTTAACGGAACTCGATTCGCTTGTAGAAATTTTTAGTTCACCTGAATCTTTTCAGCGTTCTCGAACTAGTTCATTTGTTGATAATGGAGCTGTTCCATTGGCTCATCACAGTCCTCTCAATGTGAATGATTCTCATGCCAATTTGTCAGAGTCGAAACCTCAGGGGGGTGATTGGTCGAGAGAATCTCATACCGTAGGAGTATTGCAAGATGAACTTTTTGGGCAATTTGTTCTTGCACTTGAAAAACTTCACTATTTTAGGACCACATCAGATGGGAGGGATGATCCTGACCAACTCGAGCGAGCAACACGTTTGTTTCATGATGCTCTTGGAGAGATGGAAAGATCCGGATGTCCTGAAATTAATCACAAAAATCTGGCCGAGTCCTTGAAATCCCTTGGTAACAGGGCTATGCAGTCAAAACTATACTCTGACGCAATTGAGTTGTATAGCTGTGCAATTGCACTATGTGAAAATAATGCCATTTACTACTGTAACAGGGCAGCTGCTTACACCCAAATCCAGAAATACTCTGAAGCAACCAGAGACTGTTTGAAATCCATTGAAATTGACCCAAATTATAGCAAGGCATATAGTCGTCTGGGCTTGGCTTTATATGACCAGGGGAACTACCGCGATGCTATTGATAAAGGATTTATGAGAGCGTTGCAGTTGGATCCAAACAATGAAGCTGTCAGGGAAAATATTCGAGTAGCTGAACAGAAGTTAAAGGAAGCACATCGACAAACTCAACATGAGCAGGGATCAACAAGTCGAAGTCAAGAATCCCAAAACCATTCTGGTGGTGGAAGGTCAAGGAGTGACAGCCCTCCATCTCCTCCCTTCCATTCTATGCCATTTAACGTCACTCTACCTTCCGAACTTTCAAACATGTTTATGAACATGGCTGCCAATGCTACAAACCCATTCCATGGGCAACATTCCGAAGACAGTGGAGAAGAGAATAGAAGCAGCAATGGTTCAGGAAATCCCGGAACGAATATGGATGCAAATTTCAGTTTCAGCATTGGAGATGGGATGCCACAGGATCTGAATGGCGCTTTGAGATCAATGATGGAAATGTTCAGTGGAGCAGCCCATGGTGGAAACCCTCAGGATAATTTCAATGGAAGCCCTCCACAAGGCTGA 7377 41.82 MAATDRRRKFRISFRVRSPTGGTSACFFFSESISSAASDLVALCAFRFVDQHRKYLIQPIVEYVSQTELKYSGRNCKMKTSDASLFSIFFKHKDKGSTSNDESEDLGDVLDSEVNSYLNNRKETHYKKIIWEQINKDYLQDQAAKKLGRDIVGAAAVVKKSKKRQRKKEAPINNPAQADTEASREMLTKKRLSSKFNFDVLDKLFSDTPAPDSSKKQGVSSCKENSSLKQSHQSHCSYQLEDDLEDNHTDTMLEENIDIEGEDPTETYGNEYYDFENEEEYVYGYDLGNCKVNASLFLSSLGRRALGKSSSKKKENRKLIILQGKYPLHTHGFRLCVEGPCRTRISFAVKECSVLHYKKAVAWCCISDLYGVNVRPIAPFGSSSRQPFVDPALIHRSLPDELLFEVFARMAPYDLGRASCVCRKWRYTIRNPVFWRSACLKAWQLSGVVENYKFLQSMYDGSWRKMWLLRPRIRTDGLYVSRNTYIRAGIAEWKITNPVHLVCYFRYIRFFPSGRFLYKNSSQKIKDVAKCMNFRASKADCIFGGHYTLSDDKVEAAVLYPGARPTVLRIRMRLRGTSTGANNRMDLLTLVTSGMNNNEVGDPEEDILGIVERWRDDETHNPDVPAVSHKRGLTPFIFVPFDQVETSELNLPVDKMDYFVPEFADLHLHKRAISGDNRSVAAELGPGDGGAAGTRRRMDNSSLQLIRDVGTKLSKHSRPTKDFIIKSLRQVVDAFACLEQSYVSDGRLKSEPAKKLEGCTKPLRNSIINGLLRNRDKDVRLLLAICVSEIFRVMAPEPPFEDKYLRDVFMLLLSSFSELADTTSSLFSWRVKILETVARCKCCVIMLDIGCNDLVLEMFNTFFSVLRDYHEPSLVNNILSIMTHILSEDASPPLVDVVLHNLVKEEKGEPTAASRLAVSIIGTCAETLEPLICGFLTSCISERDVVGSELKEFYHEIIFRIFQCVPQMLLPVIPNLTLELLTDQVDVRIKAVKIIGRLLSLPGHCVAQKYRGLFMEFLKRFCDKSAEVRIHAIQCAKDCYMANPDCSESMEVLAAVEERLLDLDDRVRTQAVIVVCDIVRSNIKFVPPTLISQAAERLRDKRISVRRKALQKLLEAYRDYCDKCSKGQSTMNDAFEQIPCKVLMLCYDKDCKEFRSQCMELVLVEDLFPAELSIEERTRHWIRLFSLFNNHHEKALGYVLLQKQRLQNELRTYLGLRKRDKENQSEEMEKQIETAFVRMAACFPEPTKAKESFYKLNQIKDNTIFNSLELLLDQLTIVEAQATRDKLLRMIGSKQPHFEFLKSLSSKCSYNLFSTEHIHFALDCILSDRLGNRHLEGPTGKLLLAIISIFPSLIRALEGRLLRLLEESNSIDSKLIDVLSKAGPHLSIELRDVYPFLERLCLEGTRAESKSAVSAIAALASTSDYFWFSKLCKGLVASLHRGMNLPTVLQSLGCIAKYSVSTFDDHDQDDGIISHIYEKIFHVDLSDNLSELDGDAAGSDSRDLKIYGLKTLVKSFLPHQGTPRRNVDKFLNVLSRMLNMCESSVDIIPTEGDQARIKLAAAKSVLRLARRWDLQIAPEIFRLTILMAKDPSYKSRKQFIDKAHKLLKEQAIPTRYACAFAFCFSDSMKDLRDDSLKYMAEFIEQYSKSAQIHQTSVAQDGSMTFAPAYIVVFLVYILAHDSGFPHVDCQDENVYAQFCRPFLFVLQMLFNADVSASKDTVLYLHSIFRAIRRVEDAVDIEISPKLHILADIGLSFVTSLNSSGVSLTCAPKQILLPLSLYRVTSRQQSRYAYDECLVGRVIKAFQSQTFLPANTSTRGDQKCLEGIMQTNINPCTSMSMRACEQVETISSRATKIKKTVNQETIVGQKRKRAVSPTTSTSIELRECSQVIRQNFPTKREKSKFSSRCETTEDPLLEADVSIQRVDMNVTSQDNVLAKNSLEDASSMFINDQLNDPCSMKRGIGSYRHCSFDLHDHQKGLKSSSTPLKFPPFSASIAGFCFRAPFLGLQAEPPSYHVRFSMANLRTDSPVSSRIVRAFLDFLNSVEPGPGVDVEGLEVAKQCLEQVFKVESPAADELTELDSLVEIFSSPESFQRSRTSSFVDNGAVPLAHHSPLNVNDSHANLSESKPQGGDWSRESHTVGVLQDELFGQFVLALEKLHYFRTTSDGRDDPDQLERATRLFHDALGEMERSGCPEINHKNLAESLKSLGNRAMQSKLYSDAIELYSCAIALCENNAIYYCNRAAAYTQIQKYSEATRDCLKSIEIDPNYSKAYSRLGLALYDQGNYRDAIDKGFMRALQLDPNNEAVRENIRVAEQKLKEAHRQTQHEQGSTSRSQESQNHSGGGRSRSDSPPSPPFHSMPFNVTLPSELSNMFMNMAANATNPFHGQHSEDSGEENRSSNGSGNPGTNMDANFSFSIGDGMPQDLNGALRSMMEMFSGAAHGGNPQDNFNGSPPQG 2458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 27997544 28038515 - CmPI595203_11g015730.1 Cmu11g1573 430095

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu11g1573 2458 CDD F-box_AtGID2-like 396 439 - -
Cmu11g1573 2458 MobiDBLite consensus disorder prediction 2383 2421 - -
Cmu11g1573 2458 Gene3D - 752 1138 IPR011989 -
Cmu11g1573 2458 MobiDBLite consensus disorder prediction 2116 2131 - -
Cmu11g1573 2458 MobiDBLite consensus disorder prediction 210 235 - -
Cmu11g1573 2458 MobiDBLite consensus disorder prediction 2438 2458 - -
Cmu11g1573 2458 MobiDBLite consensus disorder prediction 158 185 - -
Cmu11g1573 2458 MobiDBLite consensus disorder prediction 207 237 - -
Cmu11g1573 2458 Gene3D Tetratricopeptide repeat domain 2196 2352 IPR011990 GO:0005515(InterPro)
Cmu11g1573 2458 Gene3D - 388 476 - -
Cmu11g1573 2458 FunFam F-box protein 7 384 476 - -
Cmu11g1573 2458 Pfam F-box-like 397 440 IPR001810 GO:0005515(InterPro)
Cmu11g1573 2458 MobiDBLite consensus disorder prediction 2398 2416 - -
Cmu11g1573 2458 MobiDBLite consensus disorder prediction 2319 2365 - -
Cmu11g1573 2458 SUPERFAMILY ARM repeat 757 1625 IPR016024 -
Cmu11g1573 2458 CDD PDS5 724 1351 - -
Cmu11g1573 2458 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 2198 2350 - -
Cmu11g1573 2458 Gene3D Immunoglobulin FC, subunit C 2016 2092 - -
Cmu11g1573 2458 MobiDBLite consensus disorder prediction 2112 2137 - -
Cmu11g1573 2458 Pfam Brf1-like TBP-binding domain 108 206 IPR011665 -
Cmu11g1573 2458 Pfam F-box only protein C-terminal region 452 661 IPR045464 -
Cmu11g1573 2458 SMART tpr_5 2237 2270 IPR019734 GO:0005515(InterPro)
Cmu11g1573 2458 SMART tpr_5 2203 2236 IPR019734 GO:0005515(InterPro)
Cmu11g1573 2458 SMART tpr_5 2271 2305 IPR019734 GO:0005515(InterPro)
Cmu11g1573 2458 Pfam Tetratricopeptide repeat 2260 2291 - -
Cmu11g1573 2458 ProSiteProfiles TPR repeat profile. 2237 2270 IPR019734 GO:0005515(InterPro)
Cmu11g1573 2458 Gene3D Single helix bin 86 149 - -
Cmu11g1573 2458 ProSiteProfiles F-box domain profile. 392 438 IPR001810 GO:0005515(InterPro)
Cmu11g1573 2458 Coils Coil 2305 2325 - -
Cmu11g1573 2458 SUPERFAMILY TPR-like 2202 2316 IPR011990 GO:0005515(InterPro)
Cmu11g1573 2458 SUPERFAMILY F-box domain 397 472 IPR036047 GO:0005515(InterPro)
Cmu11g1573 2458 MobiDBLite consensus disorder prediction 2329 2354 - -
Cmu11g1573 2458 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 701 1934 IPR039776 GO:0000785(PANTHER)|GO:0005634(PANTHER)|GO:0006281(PANTHER)|GO:0007064(PANTHER)|GO:0007064(InterPro)
Cmu11g1573 2458 Coils Coil 1218 1238 - -
Cmu11g1573 2458 Pfam Sister chromatid cohesion protein PDS5 protein 723 1782 - -
Cmu11g1573 2458 SMART fbox_2 398 438 IPR001810 GO:0005515(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu11g1573 K11267 - - csv:101216961 2003.41
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1076 Cmu-Chr1:16963110 Cmu11g1573 Cmu-Chr11:27997544 6.60E-173 dispersed
Cmu09g0312 Cmu-Chr9:2965923 Cmu11g1573 Cmu-Chr11:27997544 1.80E-25 dispersed
Cmu11g1573 Cmu-Chr11:27997544 Cmu08g1308 Cmu-Chr8:25317489 6.90E-30 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g255 . . . . . . . . . . . Cma09g00791 . . . Cpe06g00624 . . . . . . . . . . . . . . . Cone4ag1413 Cone7ag1525 . . Lsi04g02394 Csa04g01794 . . . . . Bda01g01441 Bpe02g01645 . . . . . Cmo09g00783 . . . Car09g00704 . . Bhi09g02687 . . . . . . Cla11g01539 Cam11g1600 Cec11g1629 Cco11g1630 Clacu11g1757 Cmu11g1573 Cre11g1991 . . Chy07g00633 Cme07g00847
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006492 1 5 1 1 0 0 1 1 0 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 1 1 1 3 1 1 36